RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 Q6ZQY7 126 aa1.56□□□□□ -2.16
CTR9-204ENST00000529355 PATE1Q8WXA2 126 aa1.56□□□□□ -2.16
CTR9-204ENST00000529355 AHCTF1Q8WYP5 2266 aa1.56□□□□□ -2.16
CTR9-204ENST00000529355 IGKV2-40A0A087WW87 121 aaPredicted RBP1.55□□□□□ -2.16
CTR9-204ENST00000529355 IGKV2D-40P01614 121 aaPredicted RBP1.55□□□□□ -2.16
CTR9-204ENST00000529355 RPL39P62891 51 aaKnown RBP1.55□□□□□ -2.16
CTR9-204ENST00000529355 LINC00575Q6W349 94 aa1.55□□□□□ -2.16
CTR9-204ENST00000529355 DEFB132Q7Z7B7 95 aa1.55□□□□□ -2.16
CTR9-204ENST00000529355 TMEM167AQ8TBQ9 72 aa1.55□□□□□ -2.16
CTR9-204ENST00000529355 RPL39LQ96EH5 51 aaKnown RBP1.55□□□□□ -2.16
CTR9-204ENST00000529355 CCL26Q9Y258 94 aa1.55□□□□□ -2.16
CTR9-204ENST00000529355 PRB1P04280 392 aa1.54□□□□□ -2.16
CTR9-204ENST00000529355 Q8IZM0 81 aa1.54□□□□□ -2.16
CTR9-204ENST00000529355 BRWD1Q9NSI6 2320 aa1.54□□□□□ -2.16
CTR9-204ENST00000529355 CNOT1A5YKK6 2376 aaKnown RBP1.53□□□□□ -2.16
CTR9-204ENST00000529355 CUL9Q8IWT3 2517 aa1.53□□□□□ -2.16
CTR9-204ENST00000529355 TP53AIP1Q9HCN2 124 aa1.53□□□□□ -2.16
CTR9-204ENST00000529355 PLCE1Q9P212 2302 aa1.53□□□□□ -2.16
CTR9-204ENST00000529355 PSORS1C2Q9UIG4 136 aa1.53□□□□□ -2.16
CTR9-204ENST00000529355 FCGBPQ9Y6R7 5405 aaPredicted RBP1.53□□□□□ -2.16
CTR9-204ENST00000529355 BPTFQ12830 3046 aa1.53□□□□□ -2.17
CTR9-204ENST00000529355 A0A087WTM6 91 aa1.52□□□□□ -2.17
CTR9-204ENST00000529355 ANGP03950 147 aaKnown RBP1.52□□□□□ -2.17
CTR9-204ENST00000529355 ACYP2P14621 99 aa1.52□□□□□ -2.17
CTR9-204ENST00000529355 RPL37AP61513 92 aaKnown RBP1.52□□□□□ -2.17
CTR9-204ENST00000529355 LINC00472Q9H8W2 130 aa1.52□□□□□ -2.17
CTR9-204ENST00000529355 CDKN2A-AS1Q9UH64 79 aa1.52□□□□□ -2.17
CTR9-204ENST00000529355 TECTAO75443 2155 aa1.52□□□□□ -2.17
CTR9-204ENST00000529355 SPTY2D1-AS1A0A0U1RR47 76 aa1.51□□□□□ -2.17
CTR9-204ENST00000529355 M0QY20 66 aa1.51□□□□□ -2.17
CTR9-204ENST00000529355 C5orf56Q8N8D9 126 aa1.51□□□□□ -2.17
CTR9-204ENST00000529355 PRO2289Q9P1D8 64 aa1.51□□□□□ -2.17
CTR9-204ENST00000529355 NAV3Q8IVL0 2385 aa1.51□□□□□ -2.17
CTR9-204ENST00000529355 ZFHX3Q15911 3703 aa1.51□□□□□ -2.17
CTR9-204ENST00000529355 A0A0G2JQZ4 141 aa1.5□□□□□ -2.17
CTR9-204ENST00000529355 NBDYA0A0U1RRE5 68 aa1.5□□□□□ -2.17
CTR9-204ENST00000529355 M0R2N4 97 aa1.5□□□□□ -2.17
CTR9-204ENST00000529355 WT1-ASQ06250 92 aa1.5□□□□□ -2.17
CTR9-204ENST00000529355 RPL39P5Q59GN2 51 aa1.5□□□□□ -2.17
CTR9-204ENST00000529355 CCL19Q99731 98 aa1.5□□□□□ -2.17
CTR9-204ENST00000529355 ABCA1O95477 2261 aa1.49□□□□□ -2.17
CTR9-204ENST00000529355 IGLV5-48A0A075B6I7 105 aa1.49□□□□□ -2.17
CTR9-204ENST00000529355 A0A096LNT2 108 aa1.49□□□□□ -2.17
CTR9-204ENST00000529355 LYNX1G3V0Z9 82 aa1.49□□□□□ -2.17
CTR9-204ENST00000529355 I3L2K1 104 aa1.49□□□□□ -2.17
CTR9-204ENST00000529355 LY6G6CO95867 125 aa1.49□□□□□ -2.17
CTR9-204ENST00000529355 PRB3Q04118 309 aaPredicted RBP1.49□□□□□ -2.17
CTR9-204ENST00000529355 LEAP2Q969E1 77 aa1.49□□□□□ -2.17
CTR9-204ENST00000529355 Q96NJ1 140 aa1.49□□□□□ -2.17
CTR9-204ENST00000529355 CACNA1BQ00975 2339 aa1.49□□□□□ -2.17
CTR9-204ENST00000529355 K7EIM0 57 aa1.48□□□□□ -2.17
CTR9-204ENST00000529355 COL6A6A6NMZ7 2263 aa1.48□□□□□ -2.17
CTR9-204ENST00000529355 WNK2Q9Y3S1 2297 aa1.47□□□□□ -2.17
CTR9-204ENST00000529355 DEFB108AA8MXU0 73 aa1.47□□□□□ -2.17
CTR9-204ENST00000529355 K7EQZ3 153 aa1.47□□□□□ -2.17
CTR9-204ENST00000529355 MINOS1Q5TGZ0 78 aa1.47□□□□□ -2.17
CTR9-204ENST00000529355 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.47□□□□□ -2.17
CTR9-204ENST00000529355 SSBP3-AS1Q7Z2R9 100 aa1.47□□□□□ -2.17
CTR9-204ENST00000529355 COX14Q96I36 57 aa1.47□□□□□ -2.17
CTR9-204ENST00000529355 H0YGG7 62 aa1.46□□□□□ -2.18
CTR9-204ENST00000529355 DEFB131AP59861 70 aa1.46□□□□□ -2.18
CTR9-204ENST00000529355 C10orf55Q5SWW7 151 aa1.46□□□□□ -2.18
CTR9-204ENST00000529355 C6orf48Q9UBA6 75 aa1.46□□□□□ -2.18
CTR9-204ENST00000529355 ZFHX2Q9C0A1 2572 aaPredicted RBP1.46□□□□□ -2.18
CTR9-204ENST00000529355 STATHP02808 62 aa1.45□□□□□ -2.18
CTR9-204ENST00000529355 COX6A2Q02221 97 aa1.45□□□□□ -2.18
CTR9-204ENST00000529355 WFDC13Q8IUB5 93 aa1.45□□□□□ -2.18
CTR9-204ENST00000529355 PRO3102Q9H379 93 aa1.45□□□□□ -2.18
CTR9-204ENST00000529355 CACNA1EQ15878 2313 aa1.45□□□□□ -2.18
CTR9-204ENST00000529355 INE1O15225 51 aa1.44□□□□□ -2.18
CTR9-204ENST00000529355 KLK9Q2XQG4 91 aa1.44□□□□□ -2.18
CTR9-204ENST00000529355 COX6B2Q6YFQ2 88 aa1.44□□□□□ -2.18
CTR9-204ENST00000529355 WFDC10BQ8IUB3 73 aa1.44□□□□□ -2.18
CTR9-204ENST00000529355 TOMM7Q9P0U1 55 aa1.44□□□□□ -2.18
CTR9-204ENST00000529355 ANKRD17O75179 2603 aaKnown RBP1.43□□□□□ -2.18
CTR9-204ENST00000529355 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.43□□□□□ -2.18
CTR9-204ENST00000529355 CRIPTQ9P021 101 aa1.43□□□□□ -2.18
CTR9-204ENST00000529355 FN1P02751 2386 aaKnown RBP1.42□□□□□ -2.18
CTR9-204ENST00000529355 Q6ZRX8 168 aa1.42□□□□□ -2.18
CTR9-204ENST00000529355 PLAC4Q8WY50 150 aa1.42□□□□□ -2.18
CTR9-204ENST00000529355 TPRP12270 2363 aaKnown RBP1.42□□□□□ -2.18
CTR9-204ENST00000529355 FBN3Q75N90 2809 aa1.42□□□□□ -2.18
CTR9-204ENST00000529355 GVQW2A0A096LPI5 108 aaPredicted RBP1.41□□□□□ -2.18
CTR9-204ENST00000529355 G3V318 75 aa1.41□□□□□ -2.18
CTR9-204ENST00000529355 C10orf99Q6UWK7 81 aa1.41□□□□□ -2.18
CTR9-204ENST00000529355 USMG5Q96IX5 58 aa1.41□□□□□ -2.18
CTR9-204ENST00000529355 MRPL34Q9BQ48 92 aaKnown RBP1.41□□□□□ -2.18
CTR9-204ENST00000529355 KAAG1Q9UBP8 84 aa1.41□□□□□ -2.18
CTR9-204ENST00000529355 SPTBN1Q01082 2364 aaKnown RBP1.4□□□□□ -2.19
CTR9-204ENST00000529355 ZDBF2Q9HCK1 2354 aa1.4□□□□□ -2.19
CTR9-204ENST00000529355 TPRXLQ17RH7 258 aa1.4□□□□□ -2.19
CTR9-204ENST00000529355 SPACA4Q8TDM5 124 aa1.4□□□□□ -2.19
CTR9-204ENST00000529355 MMP24-AS1A0A0U1RRL7 71 aa1.39□□□□□ -2.19
CTR9-204ENST00000529355 SPINK13Q1W4C9 94 aa1.38□□□□□ -2.19
CTR9-204ENST00000529355 DEFB109BQ30KR1 87 aa1.38□□□□□ -2.19
CTR9-204ENST00000529355 DEFB104AQ8WTQ1 72 aa1.38□□□□□ -2.19
CTR9-204ENST00000529355 PKDREJQ9NTG1 2253 aa1.37□□□□□ -2.19
CTR9-204ENST00000529355 H0YAA0 97 aa1.37□□□□□ -2.19
CTR9-204ENST00000529355 H3BUA1 57 aa1.37□□□□□ -2.19
CTR9-204ENST00000529355 ACACAQ13085 2346 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms