RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
TRIM3-208ENST00000529058 MIR7-3HGQ8N6C7 128 aa8.09□□□□□ -1.11
TRIM3-208ENST00000529058 DAND5Q8N907 189 aa8.09□□□□□ -1.11
TRIM3-208ENST00000529058 SPANXDQ9BXN6 97 aa8.09□□□□□ -1.11
TRIM3-208ENST00000529058 SNHG12Q9BXW3 62 aa8.09□□□□□ -1.11
TRIM3-208ENST00000529058 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.11
TRIM3-208ENST00000529058 SPANXCQ9NY87 97 aa8.09□□□□□ -1.11
TRIM3-208ENST00000529058 ADAMTSL4-AS1Q5T5F5 129 aa8.08□□□□□ -1.12
TRIM3-208ENST00000529058 LINC00304Q8N9R0 145 aa8.08□□□□□ -1.12
TRIM3-208ENST00000529058 HIST1H4GQ99525 98 aa8.08□□□□□ -1.12
TRIM3-208ENST00000529058 NPC2P61916 151 aa8.07□□□□□ -1.12
TRIM3-208ENST00000529058 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
TRIM3-208ENST00000529058 HSD52Q0P140 79 aa8.06□□□□□ -1.12
TRIM3-208ENST00000529058 KRTAP13-2Q52LG2 175 aa8.06□□□□□ -1.12
TRIM3-208ENST00000529058 Q6ZVH6 145 aa8.06□□□□□ -1.12
TRIM3-208ENST00000529058 TAL2Q16559 108 aa8.05□□□□□ -1.12
TRIM3-208ENST00000529058 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
TRIM3-208ENST00000529058 IFITM1P13164 125 aa8.04□□□□□ -1.12
TRIM3-208ENST00000529058 LINC00308Q8TCZ7 52 aa8.04□□□□□ -1.12
TRIM3-208ENST00000529058 COPS9Q8WXC6 57 aa8.04□□□□□ -1.12
TRIM3-208ENST00000529058 ANAPC11Q9NYG5 84 aa8.04□□□□□ -1.12
TRIM3-208ENST00000529058 LCE2CQ5TA81 110 aa8.03□□□□□ -1.12
TRIM3-208ENST00000529058 SOSTDC1Q6X4U4 206 aa8.03□□□□□ -1.12
TRIM3-208ENST00000529058 MUSTN1Q8IVN3 82 aa8.03□□□□□ -1.12
TRIM3-208ENST00000529058 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
TRIM3-208ENST00000529058 XAGE1AQ9HD64 81 aa8.03□□□□□ -1.12
TRIM3-208ENST00000529058 CFC1BP0CG36 223 aa8.02□□□□□ -1.13
TRIM3-208ENST00000529058 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
TRIM3-208ENST00000529058 CEND1Q8N111 149 aa8.02□□□□□ -1.13
TRIM3-208ENST00000529058 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
TRIM3-208ENST00000529058 C9orf129Q5T035 196 aaKnown RBP8.01□□□□□ -1.13
TRIM3-208ENST00000529058 LOC107984156A0A0G2JMH3 177 aa8□□□□□ -1.13
TRIM3-208ENST00000529058 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
TRIM3-208ENST00000529058 RPL24P83731 157 aaKnown RBP8□□□□□ -1.13
TRIM3-208ENST00000529058 ARL17AQ8IVW1 177 aa8□□□□□ -1.13
TRIM3-208ENST00000529058 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
TRIM3-208ENST00000529058 A6NJY4 79 aa7.99□□□□□ -1.13
TRIM3-208ENST00000529058 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
TRIM3-208ENST00000529058 FXYD2P54710 66 aa7.99□□□□□ -1.13
TRIM3-208ENST00000529058 BATFQ16520 125 aa7.99□□□□□ -1.13
TRIM3-208ENST00000529058 A4D1N5 150 aa7.98□□□□□ -1.13
TRIM3-208ENST00000529058 MT1HP80294 61 aa7.98□□□□□ -1.13
TRIM3-208ENST00000529058 KRTAP13-3Q3SY46 172 aa7.98□□□□□ -1.13
TRIM3-208ENST00000529058 FAM229BQ4G0N7 80 aa7.98□□□□□ -1.13
TRIM3-208ENST00000529058 BVES-AS1Q5T3Y7 98 aa7.98□□□□□ -1.13
TRIM3-208ENST00000529058 BCE1O60756 84 aa7.97□□□□□ -1.13
TRIM3-208ENST00000529058 FP248Q71RG6 208 aaPredicted RBP7.97□□□□□ -1.13
TRIM3-208ENST00000529058 Q8NDZ9 215 aa7.97□□□□□ -1.13
TRIM3-208ENST00000529058 C22orf24Q9Y442 160 aa7.97□□□□□ -1.13
TRIM3-208ENST00000529058 NCR3O14931 201 aa7.96□□□□□ -1.14
TRIM3-208ENST00000529058 NDUFC2O95298 119 aa7.96□□□□□ -1.14
TRIM3-208ENST00000529058 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
TRIM3-208ENST00000529058 VPREB1P12018 145 aa7.95□□□□□ -1.14
TRIM3-208ENST00000529058 NHP2Q9NX24 153 aaKnown RBP7.95□□□□□ -1.14
TRIM3-208ENST00000529058 NKAPP1Q8N9T2 125 aa7.94□□□□□ -1.14
TRIM3-208ENST00000529058 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
TRIM3-208ENST00000529058 IGKV2-28A0A075B6P5 120 aa7.93□□□□□ -1.14
TRIM3-208ENST00000529058 A6NDN8 102 aa7.93□□□□□ -1.14
TRIM3-208ENST00000529058 IGKV2D-28P01615 120 aa7.93□□□□□ -1.14
TRIM3-208ENST00000529058 KRTAP10-6P60371 365 aaPredicted RBP7.93□□□□□ -1.14
TRIM3-208ENST00000529058 A0A0B4J2C4 111 aa7.92□□□□□ -1.14
TRIM3-208ENST00000529058 K7ERJ3 54 aa7.92□□□□□ -1.14
TRIM3-208ENST00000529058 KRTAP19-2Q3LHN2 52 aa7.92□□□□□ -1.14
TRIM3-208ENST00000529058 RAB37Q96AX2 223 aa7.92□□□□□ -1.14
TRIM3-208ENST00000529058 TRBV10-2A0A0K0K1G8 114 aa7.91□□□□□ -1.14
TRIM3-208ENST00000529058 CFC1P0CG37 223 aa7.91□□□□□ -1.14
TRIM3-208ENST00000529058 TRAV13-2A0A0B4J235 113 aa7.9□□□□□ -1.14
TRIM3-208ENST00000529058 A0A1B0GWB2 263 aa7.9□□□□□ -1.14
TRIM3-208ENST00000529058 M0R378 163 aa7.9□□□□□ -1.14
TRIM3-208ENST00000529058 MRPL55Q7Z7F7 128 aaKnown RBP7.9□□□□□ -1.14
TRIM3-208ENST00000529058 OR13C6PQ8NH95 151 aa7.9□□□□□ -1.14
TRIM3-208ENST00000529058 GAGE10A6NGK3 116 aa7.89□□□□□ -1.15
TRIM3-208ENST00000529058 UBE2V1Q13404 147 aa7.89□□□□□ -1.15
TRIM3-208ENST00000529058 S100A7L2Q5SY68 101 aa7.89□□□□□ -1.15
TRIM3-208ENST00000529058 SPAG11AQ6PDA7 123 aa7.88□□□□□ -1.15
TRIM3-208ENST00000529058 KRTAP13-1Q8IUC0 172 aa7.88□□□□□ -1.15
TRIM3-208ENST00000529058 PRO1854Q9UHT4 67 aa7.88□□□□□ -1.15
TRIM3-208ENST00000529058 UBE2AP49459 152 aa7.87□□□□□ -1.15
TRIM3-208ENST00000529058 TRBV10-3A0A0K0K1G6 114 aa7.86□□□□□ -1.15
TRIM3-208ENST00000529058 H7C2G1 150 aa7.86□□□□□ -1.15
TRIM3-208ENST00000529058 IGLV6-57P01721 117 aa7.86□□□□□ -1.15
TRIM3-208ENST00000529058 VAMP3Q15836 100 aa7.86□□□□□ -1.15
TRIM3-208ENST00000529058 Q1RN00 199 aa7.86□□□□□ -1.15
TRIM3-208ENST00000529058 LINC00167Q96N53 147 aa7.86□□□□□ -1.15
TRIM3-208ENST00000529058 TMEM126AQ9H061 195 aa7.86□□□□□ -1.15
TRIM3-208ENST00000529058 RPL37AP8A6NKH3 93 aa7.85□□□□□ -1.15
TRIM3-208ENST00000529058 C3orf22Q8N5N4 141 aa7.85□□□□□ -1.15
TRIM3-208ENST00000529058 GTF2H5Q6ZYL4 71 aa7.84□□□□□ -1.15
TRIM3-208ENST00000529058 TRAV23DV6A0A075B6W5 121 aa7.83□□□□□ -1.16
TRIM3-208ENST00000529058 CBY1Q9Y3M2 126 aa7.83□□□□□ -1.16
TRIM3-208ENST00000529058 PRYO14603 147 aa7.82□□□□□ -1.16
TRIM3-208ENST00000529058 SMIM11BQ8TCY0 68 aa7.82□□□□□ -1.16
TRIM3-208ENST00000529058 TAX1BP3O14907 124 aa7.81□□□□□ -1.16
TRIM3-208ENST00000529058 XP32Q5T750 250 aa7.81□□□□□ -1.16
TRIM3-208ENST00000529058 KCNQ1DNQ9H478 68 aa7.81□□□□□ -1.16
TRIM3-208ENST00000529058 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
TRIM3-208ENST00000529058 C9orf118A6NHY6 69 aa7.79□□□□□ -1.16
TRIM3-208ENST00000529058 M0R2T5 61 aa7.79□□□□□ -1.16
TRIM3-208ENST00000529058 ZNF73O43830 326 aaPredicted RBP7.79□□□□□ -1.16
TRIM3-208ENST00000529058 PSMB2P49721 201 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms