RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 TRAV23DV6A0A075B6W5 121 aa15.35■□□□□ 0.05
TSPAN4-217ENST00000527644 C3orf22Q8N5N4 141 aa15.35■□□□□ 0.05
TSPAN4-217ENST00000527644 ANKRD39Q53RE8 183 aa15.33■□□□□ 0.04
TSPAN4-217ENST00000527644 Q6ZRX8 168 aa15.33■□□□□ 0.04
TSPAN4-217ENST00000527644 ATOH7Q8N100 152 aa15.33■□□□□ 0.04
TSPAN4-217ENST00000527644 CBY1Q9Y3M2 126 aa15.33■□□□□ 0.04
TSPAN4-217ENST00000527644 CTAG1AP78358 180 aa15.32■□□□□ 0.04
TSPAN4-217ENST00000527644 HIST3H2BBQ8N257 126 aa15.31■□□□□ 0.04
TSPAN4-217ENST00000527644 ZNF73O43830 326 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-217ENST00000527644 SCGB1D4Q6XE38 83 aa15.3■□□□□ 0.04
TSPAN4-217ENST00000527644 Q9BRP9 147 aa15.3■□□□□ 0.04
TSPAN4-217ENST00000527644 S100A2P29034 98 aa15.29■□□□□ 0.04
TSPAN4-217ENST00000527644 JOSD1Q15040 202 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-217ENST00000527644 PPDPFQ9H3Y8 114 aa15.29■□□□□ 0.04
TSPAN4-217ENST00000527644 ERC2-IT1O76042 136 aa15.28■□□□□ 0.04
TSPAN4-217ENST00000527644 LINC00483Q53H64 154 aa15.28■□□□□ 0.04
TSPAN4-217ENST00000527644 HIST1H2BLQ99880 126 aa15.28■□□□□ 0.04
TSPAN4-217ENST00000527644 SPANXDQ9BXN6 97 aa15.28■□□□□ 0.04
TSPAN4-217ENST00000527644 SNRPEP62304 92 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-217ENST00000527644 OR13C6PQ8NH95 151 aa15.27■□□□□ 0.04
TSPAN4-217ENST00000527644 GAGE2AQ6NT46 116 aa15.26■□□□□ 0.03
TSPAN4-217ENST00000527644 LINC00518Q8N0U6 118 aa15.26■□□□□ 0.03
TSPAN4-217ENST00000527644 HINT1P49773 126 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-217ENST00000527644 S100A6P06703 90 aa15.24■□□□□ 0.03
TSPAN4-217ENST00000527644 SPAG11AQ6PDA7 123 aa15.24■□□□□ 0.03
TSPAN4-217ENST00000527644 COPS9Q8WXC6 57 aa15.24■□□□□ 0.03
TSPAN4-217ENST00000527644 PCP2Q8IVA1 136 aa15.23■□□□□ 0.03
TSPAN4-217ENST00000527644 RNF213Q63HN8 5207 aa15.22■□□□□ 0.03
TSPAN4-217ENST00000527644 Q6ZVH6 145 aa15.22■□□□□ 0.03
TSPAN4-217ENST00000527644 IFITM1P13164 125 aa15.21■□□□□ 0.03
TSPAN4-217ENST00000527644 C4orf48Q5BLP8 95 aa15.19■□□□□ 0.02
TSPAN4-217ENST00000527644 Q8NBF4 154 aa15.18■□□□□ 0.02
TSPAN4-217ENST00000527644 RETNLBQ9BQ08 111 aa15.17■□□□□ 0.02
TSPAN4-217ENST00000527644 C5orf52A6NGY3 159 aa15.16■□□□□ 0.02
TSPAN4-217ENST00000527644 HSBP1L1C9JCN9 74 aa15.14■□□□□ 0.01
TSPAN4-217ENST00000527644 MUSTN1Q8IVN3 82 aa15.14■□□□□ 0.01
TSPAN4-217ENST00000527644 IGLV9-49A0A0B4J1Y8 123 aa15.13■□□□□ 0.01
TSPAN4-217ENST00000527644 SSBP3-AS1Q7Z2R9 100 aa15.13■□□□□ 0.01
TSPAN4-217ENST00000527644 DHRS4-AS1Q9P1J3 65 aa15.12■□□□□ 0.01
TSPAN4-217ENST00000527644 MOBPQ13875 183 aa15.11■□□□□ 0.01
TSPAN4-217ENST00000527644 C6orf99Q4VX62 202 aa15.1■□□□□ 0.01
TSPAN4-217ENST00000527644 ST20-AS1Q8NBB2 130 aa15.1■□□□□ 0.01
TSPAN4-217ENST00000527644 SPINK1P00995 79 aa15.09■□□□□ 0.01
TSPAN4-217ENST00000527644 COX7BP24311 80 aa15.09■□□□□ 0.01
TSPAN4-217ENST00000527644 ELOF1P60002 83 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-217ENST00000527644 A6NDN8 102 aa15.07■□□□□ 0
TSPAN4-217ENST00000527644 IGLV7-46A0A075B6I9 117 aa15.05■□□□□ -0
TSPAN4-217ENST00000527644 TRBV7-6A0A0J9YX20 115 aa15.05■□□□□ -0
TSPAN4-217ENST00000527644 SCGB1D1O95968 90 aa15.04■□□□□ -0
TSPAN4-217ENST00000527644 SPRR1BP22528 89 aa15.03■□□□□ -0
TSPAN4-217ENST00000527644 TRAV13-2A0A0B4J235 113 aa15.02■□□□□ -0
TSPAN4-217ENST00000527644 C9orf153Q5TBE3 101 aa15.02■□□□□ -0
TSPAN4-217ENST00000527644 TPRXLQ17RH7 258 aa15.01□□□□□ -0.01
TSPAN4-217ENST00000527644 SLC25A34Q6PIV7 304 aa15.01□□□□□ -0.01
TSPAN4-217ENST00000527644 A0A1B0GWB2 263 aa15□□□□□ -0.01
TSPAN4-217ENST00000527644 RPS29P62273 56 aaKnown RBP15□□□□□ -0.01
TSPAN4-217ENST00000527644 FP248Q71RG6 208 aaPredicted RBP14.99□□□□□ -0.01
TSPAN4-217ENST00000527644 LAMTOR3Q9UHA4 124 aa14.95□□□□□ -0.02
TSPAN4-217ENST00000527644 A4D1N5 150 aa14.94□□□□□ -0.02
TSPAN4-217ENST00000527644 TAL2Q16559 108 aa14.94□□□□□ -0.02
TSPAN4-217ENST00000527644 CDIP1Q9H305 208 aa14.94□□□□□ -0.02
TSPAN4-217ENST00000527644 SMIM11BQ8TCY0 68 aa14.93□□□□□ -0.02
TSPAN4-217ENST00000527644 COX8AP10176 69 aa14.91□□□□□ -0.02
TSPAN4-217ENST00000527644 TEX49A0A1B0GTD5 131 aa14.9□□□□□ -0.02
TSPAN4-217ENST00000527644 Q8N377 158 aa14.9□□□□□ -0.02
TSPAN4-217ENST00000527644 DEFB105AQ8NG35 78 aa14.9□□□□□ -0.02
TSPAN4-217ENST00000527644 SLC25A20O43772 301 aa14.89□□□□□ -0.03
TSPAN4-217ENST00000527644 DLEU1O43261 78 aa14.87□□□□□ -0.03
TSPAN4-217ENST00000527644 NHP2Q9NX24 153 aaKnown RBP14.87□□□□□ -0.03
TSPAN4-217ENST00000527644 HIST1H4GQ99525 98 aa14.86□□□□□ -0.03
TSPAN4-217ENST00000527644 VAMP3Q15836 100 aa14.85□□□□□ -0.03
TSPAN4-217ENST00000527644 IGLV5-48A0A075B6I7 105 aa14.84□□□□□ -0.03
TSPAN4-217ENST00000527644 Q1RN00 199 aa14.84□□□□□ -0.03
TSPAN4-217ENST00000527644 MUC2Q02817 5179 aa14.84□□□□□ -0.03
TSPAN4-217ENST00000527644 LINC01547P58512 204 aaPredicted RBP14.83□□□□□ -0.04
TSPAN4-217ENST00000527644 SMIM29Q86T20 159 aa14.81□□□□□ -0.04
TSPAN4-217ENST00000527644 KRTAP13-3Q3SY46 172 aa14.8□□□□□ -0.04
TSPAN4-217ENST00000527644 C14orf144Q96I85 54 aa14.79□□□□□ -0.04
TSPAN4-217ENST00000527644 PRO1933Q9H354 126 aa14.79□□□□□ -0.04
TSPAN4-217ENST00000527644 PAM16Q9Y3D7 125 aa14.79□□□□□ -0.04
TSPAN4-217ENST00000527644 SPATA45Q537H7 98 aa14.78□□□□□ -0.04
TSPAN4-217ENST00000527644 MUC17Q685J3 4493 aa14.78□□□□□ -0.04
TSPAN4-217ENST00000527644 HRCT1Q6UXD1 115 aa14.77□□□□□ -0.05
TSPAN4-217ENST00000527644 VAMP8Q9BV40 100 aa14.77□□□□□ -0.05
TSPAN4-217ENST00000527644 LINC00575Q6W349 94 aa14.76□□□□□ -0.05
TSPAN4-217ENST00000527644 C12orf57Q99622 126 aa14.76□□□□□ -0.05
TSPAN4-217ENST00000527644 LIMD2Q9BT23 127 aa14.76□□□□□ -0.05
TSPAN4-217ENST00000527644 CD164Q04900 197 aa14.75□□□□□ -0.05
TSPAN4-217ENST00000527644 HIGD1BQ9P298 99 aa14.75□□□□□ -0.05
TSPAN4-217ENST00000527644 hADV29S1A0JD25 119 aa14.71□□□□□ -0.05
TSPAN4-217ENST00000527644 H7C2G1 150 aa14.69□□□□□ -0.06
TSPAN4-217ENST00000527644 BVES-AS1Q5T3Y7 98 aa14.69□□□□□ -0.06
TSPAN4-217ENST00000527644 A0A0U1RQV1 116 aa14.67□□□□□ -0.06
TSPAN4-217ENST00000527644 CFC1BP0CG36 223 aa14.67□□□□□ -0.06
TSPAN4-217ENST00000527644 CFC1P0CG37 223 aa14.67□□□□□ -0.06
TSPAN4-217ENST00000527644 Q6ZQY7 126 aa14.67□□□□□ -0.06
TSPAN4-217ENST00000527644 C2orf91Q6ZV80 131 aa14.66□□□□□ -0.06
TSPAN4-217ENST00000527644 RAB37Q96AX2 223 aa14.65□□□□□ -0.06
TSPAN4-217ENST00000527644 A0A0B4J2C4 111 aa14.62□□□□□ -0.07
TSPAN4-217ENST00000527644 F8WEM9 126 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms