RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 PCP2Q8IVA1 136 aa11.25□□□□□ -0.61
PKP3-204ENST00000526971 SPANXCQ9NY87 97 aa11.25□□□□□ -0.61
PKP3-204ENST00000526971 C5orf52A6NGY3 159 aa11.24□□□□□ -0.61
PKP3-204ENST00000526971 SPANXDQ9BXN6 97 aa11.23□□□□□ -0.61
PKP3-204ENST00000526971 B5MCH6 92 aa11.22□□□□□ -0.61
PKP3-204ENST00000526971 TYMSOSQ8TAI1 123 aa11.22□□□□□ -0.61
PKP3-204ENST00000526971 TRAV23DV6A0A075B6W5 121 aa11.21□□□□□ -0.61
PKP3-204ENST00000526971 SMCR5Q8TEV8 140 aa11.21□□□□□ -0.61
PKP3-204ENST00000526971 HSBP1L1C9JCN9 74 aa11.2□□□□□ -0.62
PKP3-204ENST00000526971 KRTAP13-2Q52LG2 175 aa11.2□□□□□ -0.62
PKP3-204ENST00000526971 SPRR4Q96PI1 79 aa11.2□□□□□ -0.62
PKP3-204ENST00000526971 ZNF706Q9Y5V0 76 aaPredicted RBP11.19□□□□□ -0.62
PKP3-204ENST00000526971 IFITM1P13164 125 aa11.18□□□□□ -0.62
PKP3-204ENST00000526971 PRR4Q16378 134 aa11.18□□□□□ -0.62
PKP3-204ENST00000526971 Q6ZVH6 145 aa11.18□□□□□ -0.62
PKP3-204ENST00000526971 LINC00518Q8N0U6 118 aa11.18□□□□□ -0.62
PKP3-204ENST00000526971 COPS9Q8WXC6 57 aa11.18□□□□□ -0.62
PKP3-204ENST00000526971 CBY1Q9Y3M2 126 aa11.18□□□□□ -0.62
PKP3-204ENST00000526971 ZNF73O43830 326 aaPredicted RBP11.17□□□□□ -0.62
PKP3-204ENST00000526971 SCGB1D1O95968 90 aa11.17□□□□□ -0.62
PKP3-204ENST00000526971 Q6ZRX8 168 aa11.17□□□□□ -0.62
PKP3-204ENST00000526971 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
PKP3-204ENST00000526971 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
PKP3-204ENST00000526971 Q9BRP9 147 aa11.15□□□□□ -0.62
PKP3-204ENST00000526971 ERC2-IT1O76042 136 aa11.14□□□□□ -0.63
PKP3-204ENST00000526971 MUSTN1Q8IVN3 82 aa11.14□□□□□ -0.63
PKP3-204ENST00000526971 JOSD1Q15040 202 aaPredicted RBP11.13□□□□□ -0.63
PKP3-204ENST00000526971 KRTAP9-2Q9BYQ4 174 aa11.13□□□□□ -0.63
PKP3-204ENST00000526971 FAT4Q6V0I7 4981 aa11.11□□□□□ -0.63
PKP3-204ENST00000526971 TSPAN13O95857 204 aa11.11□□□□□ -0.63
PKP3-204ENST00000526971 HINT1P49773 126 aaPredicted RBP11.11□□□□□ -0.63
PKP3-204ENST00000526971 C3orf22Q8N5N4 141 aa11.11□□□□□ -0.63
PKP3-204ENST00000526971 LINC00483Q53H64 154 aa11.1□□□□□ -0.63
PKP3-204ENST00000526971 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
PKP3-204ENST00000526971 LINC00304Q8N9R0 145 aa11.09□□□□□ -0.63
PKP3-204ENST00000526971 A6NDN8 102 aa11.05□□□□□ -0.64
PKP3-204ENST00000526971 C6orf99Q4VX62 202 aa11.05□□□□□ -0.64
PKP3-204ENST00000526971 COX8AP10176 69 aa11.04□□□□□ -0.64
PKP3-204ENST00000526971 COX7BP24311 80 aa11.04□□□□□ -0.64
PKP3-204ENST00000526971 LCE2AQ5TA79 106 aaPredicted RBP11.04□□□□□ -0.64
PKP3-204ENST00000526971 TRAV13-2A0A0B4J235 113 aa11.03□□□□□ -0.64
PKP3-204ENST00000526971 ELOF1P60002 83 aaKnown RBP11.03□□□□□ -0.64
PKP3-204ENST00000526971 DHRS4-AS1Q9P1J3 65 aa11.03□□□□□ -0.64
PKP3-204ENST00000526971 A0A0U1RQV1 116 aa11.02□□□□□ -0.65
PKP3-204ENST00000526971 CTAG1AP78358 180 aa11.02□□□□□ -0.65
PKP3-204ENST00000526971 ST20-AS1Q8NBB2 130 aa11.02□□□□□ -0.65
PKP3-204ENST00000526971 TRBV7-6A0A0J9YX20 115 aa11.01□□□□□ -0.65
PKP3-204ENST00000526971 DLEU1O43261 78 aa11.01□□□□□ -0.65
PKP3-204ENST00000526971 SPAG11AQ6PDA7 123 aa11□□□□□ -0.65
PKP3-204ENST00000526971 A4D1N5 150 aa10.99□□□□□ -0.65
PKP3-204ENST00000526971 Q8NBF4 154 aa10.99□□□□□ -0.65
PKP3-204ENST00000526971 PAM16Q9Y3D7 125 aa10.99□□□□□ -0.65
PKP3-204ENST00000526971 MUC17Q685J3 4493 aa10.99□□□□□ -0.65
PKP3-204ENST00000526971 SPATA45Q537H7 98 aa10.98□□□□□ -0.65
PKP3-204ENST00000526971 C14orf144Q96I85 54 aa10.98□□□□□ -0.65
PKP3-204ENST00000526971 VAMP8Q9BV40 100 aa10.98□□□□□ -0.65
PKP3-204ENST00000526971 IGLV9-49A0A0B4J1Y8 123 aa10.97□□□□□ -0.65
PKP3-204ENST00000526971 C4orf48Q5BLP8 95 aa10.97□□□□□ -0.65
PKP3-204ENST00000526971 HIST1H4GQ99525 98 aa10.97□□□□□ -0.65
PKP3-204ENST00000526971 A0A1B0GWB2 263 aa10.96□□□□□ -0.65
PKP3-204ENST00000526971 MOBPQ13875 183 aa10.96□□□□□ -0.65
PKP3-204ENST00000526971 SSBP3-AS1Q7Z2R9 100 aa10.96□□□□□ -0.65
PKP3-204ENST00000526971 SMIM11BQ8TCY0 68 aa10.96□□□□□ -0.65
PKP3-204ENST00000526971 SPRR1BP22528 89 aa10.95□□□□□ -0.66
PKP3-204ENST00000526971 TMA7Q9Y2S6 64 aaKnown RBP10.94□□□□□ -0.66
PKP3-204ENST00000526971 SLC25A34Q6PIV7 304 aa10.92□□□□□ -0.66
PKP3-204ENST00000526971 RETNLBQ9BQ08 111 aa10.92□□□□□ -0.66
PKP3-204ENST00000526971 HIGD1BQ9P298 99 aa10.92□□□□□ -0.66
PKP3-204ENST00000526971 SPINK1P00995 79 aa10.9□□□□□ -0.66
PKP3-204ENST00000526971 PYY3Q5JQD4 70 aa10.9□□□□□ -0.66
PKP3-204ENST00000526971 C9orf153Q5TBE3 101 aa10.9□□□□□ -0.66
PKP3-204ENST00000526971 C12orf57Q99622 126 aa10.9□□□□□ -0.66
PKP3-204ENST00000526971 TAL2Q16559 108 aa10.89□□□□□ -0.67
PKP3-204ENST00000526971 C2orf91Q6ZV80 131 aa10.89□□□□□ -0.67
PKP3-204ENST00000526971 VAMP3Q15836 100 aa10.88□□□□□ -0.67
PKP3-204ENST00000526971 DEFB105AQ8NG35 78 aa10.88□□□□□ -0.67
PKP3-204ENST00000526971 KRTAP9-6A0A140TA67 174 aa10.87□□□□□ -0.67
PKP3-204ENST00000526971 NHP2Q9NX24 153 aaKnown RBP10.87□□□□□ -0.67
PKP3-204ENST00000526971 LAMTOR3Q9UHA4 124 aa10.87□□□□□ -0.67
PKP3-204ENST00000526971 TEX49A0A1B0GTD5 131 aa10.86□□□□□ -0.67
PKP3-204ENST00000526971 IGLV5-48A0A075B6I7 105 aa10.84□□□□□ -0.67
PKP3-204ENST00000526971 LINC01547P58512 204 aaPredicted RBP10.84□□□□□ -0.67
PKP3-204ENST00000526971 RPS29P62273 56 aaKnown RBP10.84□□□□□ -0.67
PKP3-204ENST00000526971 IGLV7-46A0A075B6I9 117 aa10.83□□□□□ -0.68
PKP3-204ENST00000526971 SLC25A20O43772 301 aa10.83□□□□□ -0.68
PKP3-204ENST00000526971 CFC1BP0CG36 223 aa10.83□□□□□ -0.68
PKP3-204ENST00000526971 CFC1P0CG37 223 aa10.83□□□□□ -0.68
PKP3-204ENST00000526971 LINC00575Q6W349 94 aa10.83□□□□□ -0.68
PKP3-204ENST00000526971 Q1RN00 199 aa10.81□□□□□ -0.68
PKP3-204ENST00000526971 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
PKP3-204ENST00000526971 SMIM29Q86T20 159 aa10.8□□□□□ -0.68
PKP3-204ENST00000526971 CEND1Q8N111 149 aa10.8□□□□□ -0.68
PKP3-204ENST00000526971 RAB37Q96AX2 223 aa10.8□□□□□ -0.68
PKP3-204ENST00000526971 A0A0B4J2C4 111 aa10.79□□□□□ -0.68
PKP3-204ENST00000526971 FP248Q71RG6 208 aaPredicted RBP10.79□□□□□ -0.68
PKP3-204ENST00000526971 hADV29S1A0JD25 119 aa10.78□□□□□ -0.68
PKP3-204ENST00000526971 H7C2G1 150 aa10.78□□□□□ -0.68
PKP3-204ENST00000526971 BVES-AS1Q5T3Y7 98 aa10.78□□□□□ -0.68
PKP3-204ENST00000526971 Q8N377 158 aa10.78□□□□□ -0.68
PKP3-204ENST00000526971 CDIP1Q9H305 208 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms