RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 ETDCA0A1B0GVM5 59 aa10.29□□□□□ -0.76
LMX1B-203ENST00000526117 DLEU1O43261 78 aa10.29□□□□□ -0.76
LMX1B-203ENST00000526117 FAM229BQ4G0N7 80 aa10.29□□□□□ -0.76
LMX1B-203ENST00000526117 PRR26Q8N8Z3 221 aa10.29□□□□□ -0.76
LMX1B-203ENST00000526117 B5MCH6 92 aa10.28□□□□□ -0.76
LMX1B-203ENST00000526117 COX8AP10176 69 aa10.28□□□□□ -0.76
LMX1B-203ENST00000526117 ZNF73O43830 326 aaPredicted RBP10.26□□□□□ -0.77
LMX1B-203ENST00000526117 Q6ZRX8 168 aa10.26□□□□□ -0.77
LMX1B-203ENST00000526117 MUSTN1Q8IVN3 82 aa10.26□□□□□ -0.77
LMX1B-203ENST00000526117 HIGD2AQ9BW72 106 aa10.25□□□□□ -0.77
LMX1B-203ENST00000526117 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
LMX1B-203ENST00000526117 CRYGAP11844 174 aa10.24□□□□□ -0.77
LMX1B-203ENST00000526117 SMCR5Q8TEV8 140 aa10.24□□□□□ -0.77
LMX1B-203ENST00000526117 VAMP8Q9BV40 100 aa10.24□□□□□ -0.77
LMX1B-203ENST00000526117 ZNF706Q9Y5V0 76 aaPredicted RBP10.24□□□□□ -0.77
LMX1B-203ENST00000526117 A0A087X002 238 aa10.22□□□□□ -0.77
LMX1B-203ENST00000526117 SPATA45Q537H7 98 aa10.22□□□□□ -0.77
LMX1B-203ENST00000526117 OR13C6PQ8NH95 151 aa10.22□□□□□ -0.77
LMX1B-203ENST00000526117 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
LMX1B-203ENST00000526117 TMA7Q9Y2S6 64 aaKnown RBP10.22□□□□□ -0.77
LMX1B-203ENST00000526117 PAM16Q9Y3D7 125 aa10.21□□□□□ -0.77
LMX1B-203ENST00000526117 TRAV13-2A0A0B4J235 113 aa10.2□□□□□ -0.78
LMX1B-203ENST00000526117 HINT1P49773 126 aaPredicted RBP10.2□□□□□ -0.78
LMX1B-203ENST00000526117 PYY3Q5JQD4 70 aa10.2□□□□□ -0.78
LMX1B-203ENST00000526117 Q9BRP9 147 aa10.2□□□□□ -0.78
LMX1B-203ENST00000526117 HIGD1BQ9P298 99 aa10.2□□□□□ -0.78
LMX1B-203ENST00000526117 TRBV7-6A0A0J9YX20 115 aa10.19□□□□□ -0.78
LMX1B-203ENST00000526117 LINC00483Q53H64 154 aa10.18□□□□□ -0.78
LMX1B-203ENST00000526117 KRTAP13-2Q52LG2 175 aa10.17□□□□□ -0.78
LMX1B-203ENST00000526117 SLC25A34Q6PIV7 304 aa10.17□□□□□ -0.78
LMX1B-203ENST00000526117 C14orf144Q96I85 54 aa10.17□□□□□ -0.78
LMX1B-203ENST00000526117 ANAPC11Q9NYG5 84 aa10.17□□□□□ -0.78
LMX1B-203ENST00000526117 ELOF1P60002 83 aaKnown RBP10.16□□□□□ -0.78
LMX1B-203ENST00000526117 TYMSOSQ8TAI1 123 aa10.16□□□□□ -0.78
LMX1B-203ENST00000526117 A6NDN8 102 aa10.15□□□□□ -0.78
LMX1B-203ENST00000526117 CTAG1AP78358 180 aa10.15□□□□□ -0.78
LMX1B-203ENST00000526117 HIST1H4GQ99525 98 aa10.15□□□□□ -0.78
LMX1B-203ENST00000526117 DHRS4-AS1Q9P1J3 65 aa10.15□□□□□ -0.78
LMX1B-203ENST00000526117 A4D1N5 150 aa10.14□□□□□ -0.79
LMX1B-203ENST00000526117 ERC2-IT1O76042 136 aa10.14□□□□□ -0.79
LMX1B-203ENST00000526117 C6orf99Q4VX62 202 aa10.14□□□□□ -0.79
LMX1B-203ENST00000526117 C2orf91Q6ZV80 131 aa10.13□□□□□ -0.79
LMX1B-203ENST00000526117 A0A1B0GWB2 263 aa10.12□□□□□ -0.79
LMX1B-203ENST00000526117 COX7BP24311 80 aa10.12□□□□□ -0.79
LMX1B-203ENST00000526117 TAL2Q16559 108 aa10.11□□□□□ -0.79
LMX1B-203ENST00000526117 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
LMX1B-203ENST00000526117 SPRR1BP22528 89 aa10.07□□□□□ -0.8
LMX1B-203ENST00000526117 GAGE2AQ6NT46 116 aa10.07□□□□□ -0.8
LMX1B-203ENST00000526117 C3orf22Q8N5N4 141 aa10.07□□□□□ -0.8
LMX1B-203ENST00000526117 LINC00304Q8N9R0 145 aa10.06□□□□□ -0.8
LMX1B-203ENST00000526117 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
LMX1B-203ENST00000526117 A0A0B4J2C4 111 aa10.04□□□□□ -0.8
LMX1B-203ENST00000526117 SPAG11AQ6PDA7 123 aa10.04□□□□□ -0.8
LMX1B-203ENST00000526117 CEND1Q8N111 149 aa10.04□□□□□ -0.8
LMX1B-203ENST00000526117 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
LMX1B-203ENST00000526117 CFC1BP0CG36 223 aa10.03□□□□□ -0.8
LMX1B-203ENST00000526117 CFC1P0CG37 223 aa10.03□□□□□ -0.8
LMX1B-203ENST00000526117 VAMP3Q15836 100 aa10.03□□□□□ -0.8
LMX1B-203ENST00000526117 ST20-AS1Q8NBB2 130 aa10.03□□□□□ -0.8
LMX1B-203ENST00000526117 TMEM238LA0A1B0GVL6 79 aa10.02□□□□□ -0.81
LMX1B-203ENST00000526117 A6NJY4 79 aa10.02□□□□□ -0.81
LMX1B-203ENST00000526117 SSBP3-AS1Q7Z2R9 100 aa10.02□□□□□ -0.81
LMX1B-203ENST00000526117 C12orf57Q99622 126 aa10.01□□□□□ -0.81
LMX1B-203ENST00000526117 UQCR10Q9UDW1 63 aa10.01□□□□□ -0.81
LMX1B-203ENST00000526117 IGLV5-48A0A075B6I7 105 aa10□□□□□ -0.81
LMX1B-203ENST00000526117 BVES-AS1Q5T3Y7 98 aa10□□□□□ -0.81
LMX1B-203ENST00000526117 HSD52Q0P140 79 aa9.99□□□□□ -0.81
LMX1B-203ENST00000526117 LINC00575Q6W349 94 aa9.98□□□□□ -0.81
LMX1B-203ENST00000526117 RAB37Q96AX2 223 aa9.98□□□□□ -0.81
LMX1B-203ENST00000526117 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
LMX1B-203ENST00000526117 SLC25A20O43772 301 aa9.97□□□□□ -0.81
LMX1B-203ENST00000526117 SMIM6P0DI80 62 aa9.97□□□□□ -0.81
LMX1B-203ENST00000526117 MOBPQ13875 183 aa9.97□□□□□ -0.81
LMX1B-203ENST00000526117 Q8NBF4 154 aa9.97□□□□□ -0.81
LMX1B-203ENST00000526117 IGLV9-49A0A0B4J1Y8 123 aa9.96□□□□□ -0.82
LMX1B-203ENST00000526117 TSPAN13O95857 204 aa9.96□□□□□ -0.82
LMX1B-203ENST00000526117 FXYD2P54710 66 aa9.96□□□□□ -0.82
LMX1B-203ENST00000526117 LINC01547P58512 204 aaPredicted RBP9.96□□□□□ -0.82
LMX1B-203ENST00000526117 SPINK1P00995 79 aa9.95□□□□□ -0.82
LMX1B-203ENST00000526117 RPS29P62273 56 aaKnown RBP9.95□□□□□ -0.82
LMX1B-203ENST00000526117 LAMTOR3Q9UHA4 124 aa9.95□□□□□ -0.82
LMX1B-203ENST00000526117 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
LMX1B-203ENST00000526117 PRO1854Q9UHT4 67 aa9.94□□□□□ -0.82
LMX1B-203ENST00000526117 hADV29S1A0JD25 119 aa9.93□□□□□ -0.82
LMX1B-203ENST00000526117 C9orf153Q5TBE3 101 aa9.91□□□□□ -0.82
LMX1B-203ENST00000526117 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
LMX1B-203ENST00000526117 H0YGX0 51 aa9.9□□□□□ -0.82
LMX1B-203ENST00000526117 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.89□□□□□ -0.83
LMX1B-203ENST00000526117 Q8N377 158 aa9.89□□□□□ -0.83
LMX1B-203ENST00000526117 DEFB105AQ8NG35 78 aa9.89□□□□□ -0.83
LMX1B-203ENST00000526117 PPDPFLQ8WWR9 84 aa9.89□□□□□ -0.83
LMX1B-203ENST00000526117 LRP2P98164 4655 aa9.88□□□□□ -0.83
LMX1B-203ENST00000526117 H7C2G1 150 aa9.88□□□□□ -0.83
LMX1B-203ENST00000526117 PRR4Q16378 134 aa9.87□□□□□ -0.83
LMX1B-203ENST00000526117 Q6ZQY7 126 aa9.87□□□□□ -0.83
LMX1B-203ENST00000526117 LOC105371267A0A1B0GV96 52 aa9.86□□□□□ -0.83
LMX1B-203ENST00000526117 A0A1B0GX51 115 aa9.86□□□□□ -0.83
LMX1B-203ENST00000526117 SNCGO76070 127 aa9.85□□□□□ -0.83
LMX1B-203ENST00000526117 CD164Q04900 197 aa9.85□□□□□ -0.83
LMX1B-203ENST00000526117 Q1RN00 199 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms