RNA–Protein interactions for RNA: ENST00000525725.5

PACSIN3-203, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-203ENST00000525725 EIF4EBP3O60516 100 aaPredicted RBP12.06□□□□□ -0.48
PACSIN3-203ENST00000525725 ARL17AQ8IVW1 177 aa12.06□□□□□ -0.48
PACSIN3-203ENST00000525725 LINC00483Q53H64 154 aa12.05□□□□□ -0.48
PACSIN3-203ENST00000525725 SOSTDC1Q6X4U4 206 aa12.05□□□□□ -0.48
PACSIN3-203ENST00000525725 FP248Q71RG6 208 aaPredicted RBP12.05□□□□□ -0.48
PACSIN3-203ENST00000525725 SMCR5Q8TEV8 140 aa12.05□□□□□ -0.48
PACSIN3-203ENST00000525725 LITAFQ99732 161 aa12.04□□□□□ -0.48
PACSIN3-203ENST00000525725 MIEN1Q9BRT3 115 aa12.04□□□□□ -0.48
PACSIN3-203ENST00000525725 TRBV10-3A0A0K0K1G6 114 aa12.03□□□□□ -0.48
PACSIN3-203ENST00000525725 PPDPFQ9H3Y8 114 aa12.03□□□□□ -0.48
PACSIN3-203ENST00000525725 Q8NBF4 154 aa12.01□□□□□ -0.49
PACSIN3-203ENST00000525725 C5orf52A6NGY3 159 aa12□□□□□ -0.49
PACSIN3-203ENST00000525725 ETDCA0A1B0GVM5 59 aa11.99□□□□□ -0.49
PACSIN3-203ENST00000525725 TIMM17BO60830 172 aa11.99□□□□□ -0.49
PACSIN3-203ENST00000525725 PCP2Q8IVA1 136 aa11.99□□□□□ -0.49
PACSIN3-203ENST00000525725 TRBV10-2A0A0K0K1G8 114 aa11.98□□□□□ -0.49
PACSIN3-203ENST00000525725 NDUFC2O95298 119 aa11.98□□□□□ -0.49
PACSIN3-203ENST00000525725 AKR1D1P51857 326 aa11.98□□□□□ -0.49
PACSIN3-203ENST00000525725 KRTAP13-3Q3SY46 172 aa11.98□□□□□ -0.49
PACSIN3-203ENST00000525725 LINC00308Q8TCZ7 52 aa11.98□□□□□ -0.49
PACSIN3-203ENST00000525725 KRTAP9-2Q9BYQ4 174 aa11.98□□□□□ -0.49
PACSIN3-203ENST00000525725 B5MCH6 92 aa11.97□□□□□ -0.49
PACSIN3-203ENST00000525725 SPANXB1Q9NS25 103 aaPredicted RBP11.97□□□□□ -0.49
PACSIN3-203ENST00000525725 DDTP30046 118 aa11.96□□□□□ -0.49
PACSIN3-203ENST00000525725 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
PACSIN3-203ENST00000525725 ERC2-IT1O76042 136 aa11.94□□□□□ -0.5
PACSIN3-203ENST00000525725 SPINK1P00995 79 aa11.94□□□□□ -0.5
PACSIN3-203ENST00000525725 RPS29P62273 56 aaKnown RBP11.94□□□□□ -0.5
PACSIN3-203ENST00000525725 Q6ZRX8 168 aa11.94□□□□□ -0.5
PACSIN3-203ENST00000525725 Q9BRP9 147 aa11.94□□□□□ -0.5
PACSIN3-203ENST00000525725 S100A7L2Q5SY68 101 aa11.93□□□□□ -0.5
PACSIN3-203ENST00000525725 SCGB1D1O95968 90 aa11.92□□□□□ -0.5
PACSIN3-203ENST00000525725 IGLV6-57P01721 117 aa11.92□□□□□ -0.5
PACSIN3-203ENST00000525725 C4orf48Q5BLP8 95 aa11.92□□□□□ -0.5
PACSIN3-203ENST00000525725 SPANXCQ9NY87 97 aa11.91□□□□□ -0.5
PACSIN3-203ENST00000525725 HSBP1L1C9JCN9 74 aa11.9□□□□□ -0.5
PACSIN3-203ENST00000525725 S100A12P80511 92 aa11.9□□□□□ -0.5
PACSIN3-203ENST00000525725 MOBPQ13875 183 aa11.89□□□□□ -0.51
PACSIN3-203ENST00000525725 ASB16-AS1Q495Z4 193 aa11.89□□□□□ -0.51
PACSIN3-203ENST00000525725 GAGE2AQ6NT46 116 aa11.89□□□□□ -0.51
PACSIN3-203ENST00000525725 SPANXDQ9BXN6 97 aa11.89□□□□□ -0.51
PACSIN3-203ENST00000525725 Q8N377 158 aa11.87□□□□□ -0.51
PACSIN3-203ENST00000525725 TRAV23DV6A0A075B6W5 121 aa11.86□□□□□ -0.51
PACSIN3-203ENST00000525725 OR13C6PQ8NH95 151 aa11.86□□□□□ -0.51
PACSIN3-203ENST00000525725 SSBP3-AS1Q7Z2R9 100 aa11.85□□□□□ -0.51
PACSIN3-203ENST00000525725 IGLV9-49A0A0B4J1Y8 123 aa11.84□□□□□ -0.51
PACSIN3-203ENST00000525725 MUSTN1Q8IVN3 82 aa11.84□□□□□ -0.51
PACSIN3-203ENST00000525725 ZNF73O43830 326 aaPredicted RBP11.82□□□□□ -0.52
PACSIN3-203ENST00000525725 IFITM1P13164 125 aa11.82□□□□□ -0.52
PACSIN3-203ENST00000525725 Q6ZVH6 145 aa11.81□□□□□ -0.52
PACSIN3-203ENST00000525725 LINC00518Q8N0U6 118 aa11.8□□□□□ -0.52
PACSIN3-203ENST00000525725 KRTAP4-1Q9BYQ7 146 aa11.8□□□□□ -0.52
PACSIN3-203ENST00000525725 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
PACSIN3-203ENST00000525725 SLC25A20O43772 301 aa11.78□□□□□ -0.52
PACSIN3-203ENST00000525725 JOSD1Q15040 202 aaPredicted RBP11.78□□□□□ -0.52
PACSIN3-203ENST00000525725 TMA7Q9Y2S6 64 aaKnown RBP11.78□□□□□ -0.52
PACSIN3-203ENST00000525725 COX8AP10176 69 aa11.75□□□□□ -0.53
PACSIN3-203ENST00000525725 XP32Q5T750 250 aa11.75□□□□□ -0.53
PACSIN3-203ENST00000525725 CBY1Q9Y3M2 126 aa11.75□□□□□ -0.53
PACSIN3-203ENST00000525725 A6NDN8 102 aa11.74□□□□□ -0.53
PACSIN3-203ENST00000525725 SEC61BP60468 96 aaKnown RBP11.74□□□□□ -0.53
PACSIN3-203ENST00000525725 ST20-AS1Q8NBB2 130 aa11.74□□□□□ -0.53
PACSIN3-203ENST00000525725 PAM16Q9Y3D7 125 aa11.74□□□□□ -0.53
PACSIN3-203ENST00000525725 HINT1P49773 126 aaPredicted RBP11.73□□□□□ -0.53
PACSIN3-203ENST00000525725 C14orf144Q96I85 54 aa11.73□□□□□ -0.53
PACSIN3-203ENST00000525725 SPRR1BP22528 89 aa11.72□□□□□ -0.53
PACSIN3-203ENST00000525725 C9orf153Q5TBE3 101 aa11.72□□□□□ -0.53
PACSIN3-203ENST00000525725 C6orf99Q4VX62 202 aa11.71□□□□□ -0.53
PACSIN3-203ENST00000525725 SPATA45Q537H7 98 aa11.71□□□□□ -0.53
PACSIN3-203ENST00000525725 VAMP8Q9BV40 100 aa11.7□□□□□ -0.54
PACSIN3-203ENST00000525725 A4D1N5 150 aa11.68□□□□□ -0.54
PACSIN3-203ENST00000525725 DLEU1O43261 78 aa11.68□□□□□ -0.54
PACSIN3-203ENST00000525725 COX7BP24311 80 aa11.68□□□□□ -0.54
PACSIN3-203ENST00000525725 TRAV13-2A0A0B4J235 113 aa11.67□□□□□ -0.54
PACSIN3-203ENST00000525725 HIST1H4GQ99525 98 aa11.67□□□□□ -0.54
PACSIN3-203ENST00000525725 ELOF1P60002 83 aaKnown RBP11.66□□□□□ -0.54
PACSIN3-203ENST00000525725 PYY3Q5JQD4 70 aa11.65□□□□□ -0.54
PACSIN3-203ENST00000525725 KRTAP9-6A0A140TA67 174 aa11.64□□□□□ -0.55
PACSIN3-203ENST00000525725 SMIM11BQ8TCY0 68 aa11.64□□□□□ -0.55
PACSIN3-203ENST00000525725 DHRS4-AS1Q9P1J3 65 aa11.64□□□□□ -0.55
PACSIN3-203ENST00000525725 C12orf57Q99622 126 aa11.63□□□□□ -0.55
PACSIN3-203ENST00000525725 SLC25A34Q6PIV7 304 aa11.62□□□□□ -0.55
PACSIN3-203ENST00000525725 LINC01547P58512 204 aaPredicted RBP11.61□□□□□ -0.55
PACSIN3-203ENST00000525725 C2orf91Q6ZV80 131 aa11.61□□□□□ -0.55
PACSIN3-203ENST00000525725 TRBV7-6A0A0J9YX20 115 aa11.6□□□□□ -0.55
PACSIN3-203ENST00000525725 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
PACSIN3-203ENST00000525725 HIGD1BQ9P298 99 aa11.59□□□□□ -0.55
PACSIN3-203ENST00000525725 A0A1B0GWB2 263 aa11.58□□□□□ -0.56
PACSIN3-203ENST00000525725 KRTAP19-2Q3LHN2 52 aa11.58□□□□□ -0.56
PACSIN3-203ENST00000525725 LCE2CQ5TA81 110 aa11.58□□□□□ -0.56
PACSIN3-203ENST00000525725 DEFB105AQ8NG35 78 aa11.55□□□□□ -0.56
PACSIN3-203ENST00000525725 CD164Q04900 197 aa11.54□□□□□ -0.56
PACSIN3-203ENST00000525725 LAMTOR3Q9UHA4 124 aa11.54□□□□□ -0.56
PACSIN3-203ENST00000525725 CFC1BP0CG36 223 aa11.52□□□□□ -0.57
PACSIN3-203ENST00000525725 CFC1P0CG37 223 aa11.52□□□□□ -0.57
PACSIN3-203ENST00000525725 TAL2Q16559 108 aa11.52□□□□□ -0.57
PACSIN3-203ENST00000525725 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
PACSIN3-203ENST00000525725 VAMP3Q15836 100 aa11.5□□□□□ -0.57
PACSIN3-203ENST00000525725 Q5XG85 94 aa11.5□□□□□ -0.57
PACSIN3-203ENST00000525725 HRCT1Q6UXD1 115 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms