RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 TRBV10-1A0A0K0K1A3 114 aa1.93□□□□□ -2.1
CD44-217ENST00000525348 M0R3E3 92 aa1.93□□□□□ -2.1
CD44-217ENST00000525348 KRTAP21-3Q3LHN1 58 aa1.93□□□□□ -2.1
CD44-217ENST00000525348 Q86TA4 180 aa1.93□□□□□ -2.1
CD44-217ENST00000525348 CNFNQ9BYD5 112 aa1.93□□□□□ -2.1
CD44-217ENST00000525348 CCL26Q9Y258 94 aa1.93□□□□□ -2.1
CD44-217ENST00000525348 FAM215AQ9Y5M1 114 aa1.93□□□□□ -2.1
CD44-217ENST00000525348 TNCP24821 2201 aa1.93□□□□□ -2.1
CD44-217ENST00000525348 IGHV3-49A0A0A0MS15 119 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 A8MUU9 505 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 NCR3O14931 201 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 IGLV3-1P01715 115 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 IGHV1-46P01743 117 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 CRIP1P50238 77 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 FAM74A4Q5TZK3 123 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 DEFB106AQ8N104 65 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 MIR7-3HGQ8N6C7 128 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 MRPL36Q9P0J6 103 aaKnown RBP1.92□□□□□ -2.1
CD44-217ENST00000525348 ORMDL1Q9P0S3 153 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 LENEPQ9Y5L5 61 aa1.92□□□□□ -2.1
CD44-217ENST00000525348 SPENQ96T58 3664 aaKnown RBP1.92□□□□□ -2.1
CD44-217ENST00000525348 PTPN13Q12923 2485 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 IGKV1OR2-108A0A075B7D4 117 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 IGHV3-66A0A0C4DH42 116 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 LINC00959A0A1B0GUT2 108 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 JMJD7-PLA2G4BH0Y9G9 81 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 K7ERS5 55 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 IGHV3-53P01767 116 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 PDE6GP18545 87 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 SPAG11BQ08648 103 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 SPAG11AQ6PDA7 123 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 SPANXA2-OT1Q8N9U9 137 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 LINC00208Q96KT6 92 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 CHCHD7Q9BUK0 85 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 MGAQ8IWI9 3026 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 CACNA1CQ13936 2221 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 ITPR3Q14573 2671 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 ABCA12Q86UK0 2595 aa1.91□□□□□ -2.1
CD44-217ENST00000525348 DNHD1Q96M86 4753 aa1.9□□□□□ -2.1
CD44-217ENST00000525348 APC2O95996 2303 aa1.9□□□□□ -2.1
CD44-217ENST00000525348 CACNA1EQ15878 2313 aa1.9□□□□□ -2.1
CD44-217ENST00000525348 ASXL3Q9C0F0 2248 aa1.9□□□□□ -2.1
CD44-217ENST00000525348 C2CD3Q4AC94 2353 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 IGLV1-50A0A075B6I6 118 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 LOC110117498A0A087WWA1 95 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 IGKV2-29A2NJV5 120 aaPredicted RBP1.9□□□□□ -2.11
CD44-217ENST00000525348 ODF3BA8MYP8 253 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 PPP1R17O96001 155 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 IGKV4-1P06312 121 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 IGHV1-8P0DP01 117 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 PRR9Q5T870 116 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 Q6ZTI0 123 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 COX7B2Q8TF08 81 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 SMIM2Q9BVW6 85 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 CADP27708 2225 aa1.9□□□□□ -2.11
CD44-217ENST00000525348 ABCA4P78363 2273 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 PTPRQQ9UMZ3 2332 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 IGHV1-3A0A0C4DH29 117 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 H0YGX0 51 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 C1orf137Q5JT78 98 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 SPATA8Q6RVD6 105 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 C9orf163Q8N9P6 203 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 SPRR4Q96PI1 79 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 KLK9Q9UKQ9 250 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 COL6A6A6NMZ7 2263 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 AKAP9Q99996 3911 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 NF1P21359 2839 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 POLQO75417 2590 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 ACACAQ13085 2346 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 UNC13CQ8NB66 2214 aa1.89□□□□□ -2.11
CD44-217ENST00000525348 LRBAP50851 2863 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 OTOGQ6ZRI0 2925 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 IGKV3-7A0A075B6H7 116 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 IGLV10-54A0A075B6I4 117 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 IGHV1-18A0A0C4DH31 117 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 M0R2N4 97 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 NDUFB1O75438 58 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 HAMPP81172 84 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 LINC00308Q8TCZ7 52 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 SMR3AQ99954 134 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 CELSR1Q9NYQ6 3014 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 MED13LQ71F56 2210 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 ICE1Q9Y2F5 2266 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 CSMD1Q96PZ7 3565 aa1.88□□□□□ -2.11
CD44-217ENST00000525348 CELSR2Q9HCU4 2923 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 CRYBG3Q68DQ2 2970 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 BSNQ9UPA5 3926 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 NDUFA4O00483 81 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 CCL18P55774 89 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 RP1P56715 2156 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 DEFB114Q30KQ6 69 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 DEFB109BQ30KR1 87 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 PIGYQ3MUY2 71 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 SPINK9Q5DT21 86 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 WFDC10AQ9H1F0 79 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 PDZD2O15018 2839 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 F5P12259 2224 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 FLNCQ14315 2725 aa1.87□□□□□ -2.11
CD44-217ENST00000525348 CREBBPQ92793 2442 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms