RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TRBV6-5A0A0K0K1A5 114 aa3.03□□□□□ -1.92
NEDD8-203ENST00000524927 K7ERS5 55 aa3.03□□□□□ -1.92
NEDD8-203ENST00000524927 HMGB3O15347 200 aaKnown RBP3.03□□□□□ -1.92
NEDD8-203ENST00000524927 PFDN1O60925 122 aa3.03□□□□□ -1.92
NEDD8-203ENST00000524927 GCHFRP30047 84 aa3.03□□□□□ -1.92
NEDD8-203ENST00000524927 UBE2G1P62253 170 aa3.03□□□□□ -1.92
NEDD8-203ENST00000524927 C1orf195Q5TG92 126 aa3.03□□□□□ -1.92
NEDD8-203ENST00000524927 TEX261Q6UWH6 196 aa3.03□□□□□ -1.92
NEDD8-203ENST00000524927 TIMM21Q9BVV7 248 aa3.03□□□□□ -1.92
NEDD8-203ENST00000524927 RNASE7Q9H1E1 156 aaKnown RBP3.03□□□□□ -1.92
NEDD8-203ENST00000524927 TMEM167BQ9NRX6 74 aa3.03□□□□□ -1.92
NEDD8-203ENST00000524927 LOC107984156A0A0G2JMH3 177 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 A0A1B0GXF2 115 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 F8VRH5 84 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 IGLC6P0CF74 106 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 FAUP35544 74 aaKnown RBP3.02□□□□□ -1.93
NEDD8-203ENST00000524927 MT4P47944 62 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 LSM3P62310 102 aaKnown RBP3.02□□□□□ -1.93
NEDD8-203ENST00000524927 Q5XG85 94 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 ARL17AQ8IVW1 177 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 AMN1Q8IY45 258 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 TRAPPC1Q9Y5R8 145 aa3.02□□□□□ -1.93
NEDD8-203ENST00000524927 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
NEDD8-203ENST00000524927 TRBV27A0A0K0K1C4 114 aa3□□□□□ -1.93
NEDD8-203ENST00000524927 F2Z2F3 143 aa3□□□□□ -1.93
NEDD8-203ENST00000524927 CD164Q04900 197 aa3□□□□□ -1.93
NEDD8-203ENST00000524927 NEDD8Q15843 81 aa3□□□□□ -1.93
NEDD8-203ENST00000524927 HRCT1Q6UXD1 115 aa3□□□□□ -1.93
NEDD8-203ENST00000524927 Q8IZM0 81 aa3□□□□□ -1.93
NEDD8-203ENST00000524927 NKX6-2Q9C056 277 aaPredicted RBP3□□□□□ -1.93
NEDD8-203ENST00000524927 A0A1B0GV72 72 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 SMLR1H3BR10 107 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 IGKV4-1P06312 121 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 TRIQKQ629K1 86 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 ADM2Q7Z4H4 148 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 Q8NDZ9 215 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 ST20Q9HBF5 79 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 MED9Q9NWA0 146 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 TOMM7Q9P0U1 55 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
NEDD8-203ENST00000524927 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
NEDD8-203ENST00000524927 H3BQ85 93 aa2.98□□□□□ -1.93
NEDD8-203ENST00000524927 HRES1P13985 223 aa2.98□□□□□ -1.93
NEDD8-203ENST00000524927 S100A2P29034 98 aa2.98□□□□□ -1.93
NEDD8-203ENST00000524927 POLR2KP53803 58 aaKnown RBP2.98□□□□□ -1.93
NEDD8-203ENST00000524927 HBBP68871 147 aa2.98□□□□□ -1.93
NEDD8-203ENST00000524927 PDZD11Q5EBL8 140 aa2.98□□□□□ -1.93
NEDD8-203ENST00000524927 SPANXB1Q9NS25 103 aaPredicted RBP2.98□□□□□ -1.93
NEDD8-203ENST00000524927 FCER1GP30273 86 aa2.97□□□□□ -1.93
NEDD8-203ENST00000524927 LINC00614P0C842 121 aa2.96□□□□□ -1.94
NEDD8-203ENST00000524927 MRPS36P82909 103 aaKnown RBP2.96□□□□□ -1.94
NEDD8-203ENST00000524927 BOD1L2Q8IYS8 172 aa2.96□□□□□ -1.94
NEDD8-203ENST00000524927 ZCCHC13Q8WW36 166 aaKnown RBP2.96□□□□□ -1.94
NEDD8-203ENST00000524927 IMUPQ9GZP8 106 aa2.96□□□□□ -1.94
NEDD8-203ENST00000524927 SPANXA1Q9NS26 97 aa2.96□□□□□ -1.94
NEDD8-203ENST00000524927 R4GN34 69 aa2.96□□□□□ -1.94
NEDD8-203ENST00000524927 A0A0B4J2C4 111 aa2.95□□□□□ -1.94
NEDD8-203ENST00000524927 TSTD3H0UI37 97 aa2.95□□□□□ -1.94
NEDD8-203ENST00000524927 SSNA1O43805 119 aa2.95□□□□□ -1.94
NEDD8-203ENST00000524927 NDUFB6O95139 128 aa2.95□□□□□ -1.94
NEDD8-203ENST00000524927 PYDC2Q56P42 97 aa2.95□□□□□ -1.94
NEDD8-203ENST00000524927 OBSCN-AS1Q96MR7 158 aa2.95□□□□□ -1.94
NEDD8-203ENST00000524927 TCEAL7Q9BRU2 100 aa2.95□□□□□ -1.94
NEDD8-203ENST00000524927 F8W036 122 aa2.94□□□□□ -1.94
NEDD8-203ENST00000524927 INMT-MINDY4F8WBC2 141 aa2.94□□□□□ -1.94
NEDD8-203ENST00000524927 ERC2-IT1O76042 136 aa2.94□□□□□ -1.94
NEDD8-203ENST00000524927 SCGB1A1P11684 91 aa2.94□□□□□ -1.94
NEDD8-203ENST00000524927 S100PP25815 95 aa2.94□□□□□ -1.94
NEDD8-203ENST00000524927 SPRR1AP35321 89 aa2.94□□□□□ -1.94
NEDD8-203ENST00000524927 DEFA1P59665 94 aa2.94□□□□□ -1.94
NEDD8-203ENST00000524927 CNFNQ9BYD5 112 aa2.94□□□□□ -1.94
NEDD8-203ENST00000524927 AKR1C3P42330 323 aa2.93□□□□□ -1.94
NEDD8-203ENST00000524927 C9orf62Q8N4C0 152 aa2.93□□□□□ -1.94
NEDD8-203ENST00000524927 ETDCA0A1B0GVM5 59 aa2.92□□□□□ -1.94
NEDD8-203ENST00000524927 BAGE2Q86Y30 109 aa2.92□□□□□ -1.94
NEDD8-203ENST00000524927 TOMM5Q8N4H5 51 aa2.92□□□□□ -1.94
NEDD8-203ENST00000524927 SMIM12Q96EX1 92 aa2.92□□□□□ -1.94
NEDD8-203ENST00000524927 A6NED7 52 aa2.91□□□□□ -1.94
NEDD8-203ENST00000524927 CCDC160A6NGH7 325 aa2.91□□□□□ -1.94
NEDD8-203ENST00000524927 H7C2G1 150 aa2.91□□□□□ -1.94
NEDD8-203ENST00000524927 SIX6O95475 246 aa2.91□□□□□ -1.94
NEDD8-203ENST00000524927 P0C880 135 aa2.91□□□□□ -1.94
NEDD8-203ENST00000524927 RAB5BP61020 215 aa2.91□□□□□ -1.94
NEDD8-203ENST00000524927 STOML3Q8TAV4 291 aa2.91□□□□□ -1.94
NEDD8-203ENST00000524927 EIF5A2Q9GZV4 153 aaKnown RBP2.91□□□□□ -1.94
NEDD8-203ENST00000524927 HSPB11Q9Y547 144 aa2.91□□□□□ -1.94
NEDD8-203ENST00000524927 TRAV9-1A0A075B6T8 112 aa2.9□□□□□ -1.95
NEDD8-203ENST00000524927 ATP6V1G2O95670 118 aa2.9□□□□□ -1.95
NEDD8-203ENST00000524927 PPBPP02775 128 aa2.9□□□□□ -1.95
NEDD8-203ENST00000524927 C12orf57Q99622 126 aa2.9□□□□□ -1.95
NEDD8-203ENST00000524927 SPRR2GQ9BYE4 73 aa2.9□□□□□ -1.95
NEDD8-203ENST00000524927 Q9H521 79 aa2.9□□□□□ -1.95
NEDD8-203ENST00000524927 RPL39P62891 51 aaKnown RBP2.89□□□□□ -1.95
NEDD8-203ENST00000524927 KRTAP25-1Q3LHN0 102 aa2.89□□□□□ -1.95
NEDD8-203ENST00000524927 ALKAL2Q6UX46 152 aa2.89□□□□□ -1.95
NEDD8-203ENST00000524927 Q96NJ1 140 aa2.89□□□□□ -1.95
NEDD8-203ENST00000524927 KCNQ1DNQ9H478 68 aa2.89□□□□□ -1.95
NEDD8-203ENST00000524927 S100A8P05109 93 aa2.88□□□□□ -1.95
NEDD8-203ENST00000524927 SMIM6P0DI80 62 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms