RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SEC11AP67812 179 aa1.8□□□□□ -2.12
CSDE1-208ENST00000524652 SYCNQ0VAF6 134 aa1.8□□□□□ -2.12
CSDE1-208ENST00000524652 CIRBPQ14011 172 aaKnown RBP1.8□□□□□ -2.12
CSDE1-208ENST00000524652 C9orf129Q5T035 196 aaKnown RBP1.8□□□□□ -2.12
CSDE1-208ENST00000524652 SCXQ7RTU7 201 aa1.8□□□□□ -2.12
CSDE1-208ENST00000524652 SPACA4Q8TDM5 124 aa1.8□□□□□ -2.12
CSDE1-208ENST00000524652 ZNF625Q96I27 306 aaPredicted RBP1.8□□□□□ -2.12
CSDE1-208ENST00000524652 CAMK2N2Q96S95 79 aa1.8□□□□□ -2.12
CSDE1-208ENST00000524652 IGKV2-24A0A0C4DH68 120 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 A0A1W2PNN7 141 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 E9PLD3 99 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 H3BRM9 83 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 J3QQQ9 107 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 NDUFA1O15239 70 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 LEPROTO15243 131 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 TLX1NBP0CAT3 122 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 PLNP26678 52 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 S100A2P29034 98 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 KRTAP10-4P60372 401 aaPredicted RBP1.79□□□□□ -2.12
CSDE1-208ENST00000524652 RPL18AQ02543 176 aaKnown RBP1.79□□□□□ -2.12
CSDE1-208ENST00000524652 C6orf226Q5I0X4 101 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 PYY3Q5JQD4 70 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 CFAP161Q6P656 301 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 PCP2Q8IVA1 136 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 CIRBP-AS1Q8TBR5 109 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 PLEKHB2Q96CS7 222 aa1.79□□□□□ -2.12
CSDE1-208ENST00000524652 LPAP08519 4548 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.78□□□□□ -2.12
CSDE1-208ENST00000524652 A0A0J9YXY3 114 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 TRBV30A0A0K0K1B3 111 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 A0A0U1RRA0 63 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 LOC107984640A0A0U1RRK4 108 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 LOC105371267A0A1B0GV96 52 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 NDUFC2-KCTD14E9PQ53 114 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 SMR3BP02814 79 aaPredicted RBP1.78□□□□□ -2.12
CSDE1-208ENST00000524652 SMIM13P0DJ93 91 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 PFN2P35080 140 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 CXCL5P42830 114 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 CKS1BP61024 79 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 JOSD1Q15040 202 aaPredicted RBP1.78□□□□□ -2.12
CSDE1-208ENST00000524652 SOSTDC1Q6X4U4 206 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 PHF5AQ7RTV0 110 aaKnown RBP1.78□□□□□ -2.12
CSDE1-208ENST00000524652 DAND5Q8N907 189 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 XAGE1AQ9HD64 81 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 NDUFA12Q9UI09 145 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 ERG28Q9UKR5 140 aa1.78□□□□□ -2.12
CSDE1-208ENST00000524652 F8WDY8 70 aa1.77□□□□□ -2.13
CSDE1-208ENST00000524652 LGALS3P17931 250 aaKnown RBP1.77□□□□□ -2.13
CSDE1-208ENST00000524652 NMUP48645 174 aa1.77□□□□□ -2.13
CSDE1-208ENST00000524652 HERVK_113P61574 105 aa1.77□□□□□ -2.13
CSDE1-208ENST00000524652 NPC2P61916 151 aa1.77□□□□□ -2.13
CSDE1-208ENST00000524652 FAM19A5Q7Z5A7 132 aaPredicted RBP1.77□□□□□ -2.13
CSDE1-208ENST00000524652 MIR7-3HGQ8N6C7 128 aa1.77□□□□□ -2.13
CSDE1-208ENST00000524652 SND1-IT1Q9HBX3 110 aa1.77□□□□□ -2.13
CSDE1-208ENST00000524652 PLAC8Q9NZF1 115 aa1.77□□□□□ -2.13
CSDE1-208ENST00000524652 MYMXA0A1B0GTQ4 84 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 C20orf202A1L168 122 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 ZNF815PA8K554 130 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 LINC00158P58513 81 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 HERV-K104P63124 156 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 PRR3P79522 188 aaKnown RBP1.76□□□□□ -2.13
CSDE1-208ENST00000524652 COX17Q14061 63 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 SPATA45Q537H7 98 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 MEIG1Q5JSS6 88 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 Q5VSD8 79 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 C2orf91Q6ZV80 131 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 BOD1L2Q8IYS8 172 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 C14orf144Q96I85 54 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 C22orf24Q9Y442 160 aa1.76□□□□□ -2.13
CSDE1-208ENST00000524652 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
CSDE1-208ENST00000524652 IGKV2-28A0A075B6P5 120 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 LOC107984156A0A0G2JMH3 177 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 M0QXV9 152 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 NCR3O14931 201 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 IGKV2D-28P01615 120 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 COX8AP10176 69 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 AKR1D1P51857 326 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 LBHQ53QV2 105 aaPredicted RBP1.75□□□□□ -2.13
CSDE1-208ENST00000524652 ARL17AQ8IVW1 177 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 LINC00308Q8TCZ7 52 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 VAMP8Q9BV40 100 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 PSORS1C2Q9UIG4 136 aa1.75□□□□□ -2.13
CSDE1-208ENST00000524652 IGLV1-50A0A075B6I6 118 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 TMEM238C9JI98 176 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 TIMM17BO60830 172 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 CXCL6P80162 114 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 SFTA2Q6UW10 78 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 SCGB1D4Q6XE38 83 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 MRPL55Q7Z7F7 128 aaKnown RBP1.74□□□□□ -2.13
CSDE1-208ENST00000524652 MUSTN1Q8IVN3 82 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 LINC00337Q8N6G1 96 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 C7orf33Q8WU49 177 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 DPH3Q96FX2 82 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 SPANXDQ9BXN6 97 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 PRO1933Q9H354 126 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 SPANXB1Q9NS25 103 aaPredicted RBP1.74□□□□□ -2.13
CSDE1-208ENST00000524652 SPANXCQ9NY87 97 aa1.74□□□□□ -2.13
CSDE1-208ENST00000524652 TRBV10-3A0A0K0K1G6 114 aa1.73□□□□□ -2.13
CSDE1-208ENST00000524652 HSBP1L1C9JCN9 74 aa1.73□□□□□ -2.13
CSDE1-208ENST00000524652 KRTAP4-16G5E9R7 235 aaPredicted RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms