RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 SPANXCQ9NY87 97 aa10.01□□□□□ -0.81
CCNC-213ENST00000523541 KRTDAPP60985 99 aa10□□□□□ -0.81
CCNC-213ENST00000523541 Q6ZRX8 168 aa10□□□□□ -0.81
CCNC-213ENST00000523541 LINC00308Q8TCZ7 52 aa10□□□□□ -0.81
CCNC-213ENST00000523541 LITAFQ99732 161 aa10□□□□□ -0.81
CCNC-213ENST00000523541 RETNLBQ9BQ08 111 aa10□□□□□ -0.81
CCNC-213ENST00000523541 TRAV23DV6A0A075B6W5 121 aa9.99□□□□□ -0.81
CCNC-213ENST00000523541 ZNF815PA8K554 130 aa9.99□□□□□ -0.81
CCNC-213ENST00000523541 HINT1P49773 126 aaPredicted RBP9.99□□□□□ -0.81
CCNC-213ENST00000523541 C3orf22Q8N5N4 141 aa9.99□□□□□ -0.81
CCNC-213ENST00000523541 C5orf52A6NGY3 159 aa9.98□□□□□ -0.81
CCNC-213ENST00000523541 C4orf48Q5BLP8 95 aa9.98□□□□□ -0.81
CCNC-213ENST00000523541 LINC00518Q8N0U6 118 aa9.98□□□□□ -0.81
CCNC-213ENST00000523541 ZNF73O43830 326 aaPredicted RBP9.97□□□□□ -0.81
CCNC-213ENST00000523541 EIF4EBP3O60516 100 aaPredicted RBP9.97□□□□□ -0.81
CCNC-213ENST00000523541 NPC2P61916 151 aa9.97□□□□□ -0.81
CCNC-213ENST00000523541 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
CCNC-213ENST00000523541 S100A1P23297 94 aa9.96□□□□□ -0.82
CCNC-213ENST00000523541 PPDPFQ9H3Y8 114 aa9.96□□□□□ -0.82
CCNC-213ENST00000523541 SNRPEP62304 92 aaKnown RBP9.95□□□□□ -0.82
CCNC-213ENST00000523541 Q6ZVH6 145 aa9.95□□□□□ -0.82
CCNC-213ENST00000523541 SSBP3-AS1Q7Z2R9 100 aa9.95□□□□□ -0.82
CCNC-213ENST00000523541 Q9BRP9 147 aa9.95□□□□□ -0.82
CCNC-213ENST00000523541 SPANXDQ9BXN6 97 aa9.94□□□□□ -0.82
CCNC-213ENST00000523541 SPINK1P00995 79 aa9.93□□□□□ -0.82
CCNC-213ENST00000523541 GAGE2AQ6NT46 116 aa9.93□□□□□ -0.82
CCNC-213ENST00000523541 ERC2-IT1O76042 136 aa9.92□□□□□ -0.82
CCNC-213ENST00000523541 IFITM1P13164 125 aa9.92□□□□□ -0.82
CCNC-213ENST00000523541 SCGB1D4Q6XE38 83 aa9.92□□□□□ -0.82
CCNC-213ENST00000523541 OR13C6PQ8NH95 151 aa9.92□□□□□ -0.82
CCNC-213ENST00000523541 Q8NBF4 154 aa9.9□□□□□ -0.82
CCNC-213ENST00000523541 TTTY13Q9BZ97 58 aa9.9□□□□□ -0.82
CCNC-213ENST00000523541 CDIP1Q9H305 208 aa9.9□□□□□ -0.82
CCNC-213ENST00000523541 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
CCNC-213ENST00000523541 RPS29P62273 56 aaKnown RBP9.89□□□□□ -0.83
CCNC-213ENST00000523541 TPRXLQ17RH7 258 aa9.89□□□□□ -0.83
CCNC-213ENST00000523541 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
CCNC-213ENST00000523541 DHRS4-AS1Q9P1J3 65 aa9.89□□□□□ -0.83
CCNC-213ENST00000523541 ANKRD39Q53RE8 183 aa9.88□□□□□ -0.83
CCNC-213ENST00000523541 IGLV9-49A0A0B4J1Y8 123 aa9.87□□□□□ -0.83
CCNC-213ENST00000523541 S100A2P29034 98 aa9.87□□□□□ -0.83
CCNC-213ENST00000523541 TRBV7-6A0A0J9YX20 115 aa9.86□□□□□ -0.83
CCNC-213ENST00000523541 SLC25A34Q6PIV7 304 aa9.86□□□□□ -0.83
CCNC-213ENST00000523541 HIST3H2BBQ8N257 126 aa9.85□□□□□ -0.83
CCNC-213ENST00000523541 A0A0U1RQV1 116 aa9.84□□□□□ -0.83
CCNC-213ENST00000523541 MOBPQ13875 183 aa9.84□□□□□ -0.83
CCNC-213ENST00000523541 ATOH7Q8N100 152 aa9.84□□□□□ -0.83
CCNC-213ENST00000523541 HIST1H2BLQ99880 126 aa9.84□□□□□ -0.83
CCNC-213ENST00000523541 S100A6P06703 90 aa9.83□□□□□ -0.84
CCNC-213ENST00000523541 SPRR1BP22528 89 aa9.83□□□□□ -0.84
CCNC-213ENST00000523541 ELOF1P60002 83 aaKnown RBP9.83□□□□□ -0.84
CCNC-213ENST00000523541 MUC2Q02817 5179 aa9.82□□□□□ -0.84
CCNC-213ENST00000523541 COX7BP24311 80 aa9.82□□□□□ -0.84
CCNC-213ENST00000523541 PCP2Q8IVA1 136 aa9.82□□□□□ -0.84
CCNC-213ENST00000523541 HSBP1L1C9JCN9 74 aa9.81□□□□□ -0.84
CCNC-213ENST00000523541 C6orf99Q4VX62 202 aa9.81□□□□□ -0.84
CCNC-213ENST00000523541 MUSTN1Q8IVN3 82 aa9.81□□□□□ -0.84
CCNC-213ENST00000523541 C9orf153Q5TBE3 101 aa9.8□□□□□ -0.84
CCNC-213ENST00000523541 ST20-AS1Q8NBB2 130 aa9.8□□□□□ -0.84
CCNC-213ENST00000523541 TRAV13-2A0A0B4J235 113 aa9.79□□□□□ -0.84
CCNC-213ENST00000523541 A0A1B0GWB2 263 aa9.79□□□□□ -0.84
CCNC-213ENST00000523541 A4D1N5 150 aa9.79□□□□□ -0.84
CCNC-213ENST00000523541 A6NDN8 102 aa9.78□□□□□ -0.84
CCNC-213ENST00000523541 SLC25A20O43772 301 aa9.78□□□□□ -0.84
CCNC-213ENST00000523541 LAMTOR3Q9UHA4 124 aa9.77□□□□□ -0.85
CCNC-213ENST00000523541 Q8N377 158 aa9.76□□□□□ -0.85
CCNC-213ENST00000523541 TEX49A0A1B0GTD5 131 aa9.74□□□□□ -0.85
CCNC-213ENST00000523541 TAL2Q16559 108 aa9.74□□□□□ -0.85
CCNC-213ENST00000523541 NHP2Q9NX24 153 aaKnown RBP9.73□□□□□ -0.85
CCNC-213ENST00000523541 MUC17Q685J3 4493 aa9.73□□□□□ -0.85
CCNC-213ENST00000523541 KRTAP13-3Q3SY46 172 aa9.71□□□□□ -0.86
CCNC-213ENST00000523541 VAMP3Q15836 100 aa9.7□□□□□ -0.86
CCNC-213ENST00000523541 SCGB1D1O95968 90 aa9.69□□□□□ -0.86
CCNC-213ENST00000523541 CD164Q04900 197 aa9.69□□□□□ -0.86
CCNC-213ENST00000523541 SMIM11BQ8TCY0 68 aa9.69□□□□□ -0.86
CCNC-213ENST00000523541 LIMD2Q9BT23 127 aa9.69□□□□□ -0.86
CCNC-213ENST00000523541 IGLV5-48A0A075B6I7 105 aa9.68□□□□□ -0.86
CCNC-213ENST00000523541 PRO1933Q9H354 126 aa9.68□□□□□ -0.86
CCNC-213ENST00000523541 DEFB105AQ8NG35 78 aa9.67□□□□□ -0.86
CCNC-213ENST00000523541 DLEU1O43261 78 aa9.65□□□□□ -0.86
CCNC-213ENST00000523541 COX8AP10176 69 aa9.64□□□□□ -0.87
CCNC-213ENST00000523541 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
CCNC-213ENST00000523541 HRCT1Q6UXD1 115 aa9.64□□□□□ -0.87
CCNC-213ENST00000523541 SMIM29Q86T20 159 aa9.63□□□□□ -0.87
CCNC-213ENST00000523541 Q1RN00 199 aa9.62□□□□□ -0.87
CCNC-213ENST00000523541 Q5XG85 94 aa9.62□□□□□ -0.87
CCNC-213ENST00000523541 HIST1H4GQ99525 98 aa9.62□□□□□ -0.87
CCNC-213ENST00000523541 LCE2BO14633 110 aa9.61□□□□□ -0.87
CCNC-213ENST00000523541 ASB16-AS1Q495Z4 193 aa9.61□□□□□ -0.87
CCNC-213ENST00000523541 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
CCNC-213ENST00000523541 H7C2G1 150 aa9.6□□□□□ -0.87
CCNC-213ENST00000523541 SEC61BP60468 96 aaKnown RBP9.59□□□□□ -0.87
CCNC-213ENST00000523541 hADV29S1A0JD25 119 aa9.58□□□□□ -0.88
CCNC-213ENST00000523541 BVES-AS1Q5T3Y7 98 aa9.58□□□□□ -0.88
CCNC-213ENST00000523541 HIGD1BQ9P298 99 aa9.57□□□□□ -0.88
CCNC-213ENST00000523541 XP32Q5T750 250 aa9.55□□□□□ -0.88
CCNC-213ENST00000523541 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
CCNC-213ENST00000523541 F8WEM9 126 aa9.54□□□□□ -0.88
CCNC-213ENST00000523541 PPDPFLQ8WWR9 84 aa9.54□□□□□ -0.88
CCNC-213ENST00000523541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms