RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 MIEN1Q9BRT3 115 aa12.2□□□□□ -0.46
PVT1-218ENST00000523328 M0R2T5 61 aa12.19□□□□□ -0.46
PVT1-218ENST00000523328 SPRR1BP22528 89 aa12.19□□□□□ -0.46
PVT1-218ENST00000523328 IFITM2Q01629 132 aa12.18□□□□□ -0.46
PVT1-218ENST00000523328 EIF4EBP3O60516 100 aaPredicted RBP12.16□□□□□ -0.46
PVT1-218ENST00000523328 SOSTDC1Q6X4U4 206 aa12.16□□□□□ -0.46
PVT1-218ENST00000523328 COMMD7Q86VX2 200 aa12.16□□□□□ -0.46
PVT1-218ENST00000523328 J3QQQ9 107 aa12.15□□□□□ -0.46
PVT1-218ENST00000523328 H0Y8G0 127 aa12.14□□□□□ -0.47
PVT1-218ENST00000523328 SLC25A34Q6PIV7 304 aa12.13□□□□□ -0.47
PVT1-218ENST00000523328 NMUP48645 174 aa12.12□□□□□ -0.47
PVT1-218ENST00000523328 NPC2P61916 151 aa12.11□□□□□ -0.47
PVT1-218ENST00000523328 HSBP1O75506 76 aa12.1□□□□□ -0.47
PVT1-218ENST00000523328 HINT1P49773 126 aaPredicted RBP12.1□□□□□ -0.47
PVT1-218ENST00000523328 LAMTOR3Q9UHA4 124 aa12.1□□□□□ -0.47
PVT1-218ENST00000523328 CD164Q04900 197 aa12.09□□□□□ -0.47
PVT1-218ENST00000523328 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
PVT1-218ENST00000523328 COX6B2Q6YFQ2 88 aa12.09□□□□□ -0.47
PVT1-218ENST00000523328 PLNP26678 52 aa12.08□□□□□ -0.48
PVT1-218ENST00000523328 RPL37P61927 97 aaKnown RBP12.08□□□□□ -0.48
PVT1-218ENST00000523328 LGALS3P17931 250 aaKnown RBP12.07□□□□□ -0.48
PVT1-218ENST00000523328 DHRS4-AS1Q9P1J3 65 aa12.07□□□□□ -0.48
PVT1-218ENST00000523328 HERVK_113P61574 105 aa12.06□□□□□ -0.48
PVT1-218ENST00000523328 CBY1Q9Y3M2 126 aa12.06□□□□□ -0.48
PVT1-218ENST00000523328 YPEL4Q96NS1 127 aa12.05□□□□□ -0.48
PVT1-218ENST00000523328 A0A0J9YXY3 114 aa12.04□□□□□ -0.48
PVT1-218ENST00000523328 H7C2G1 150 aa12.04□□□□□ -0.48
PVT1-218ENST00000523328 Q5XG85 94 aa12.04□□□□□ -0.48
PVT1-218ENST00000523328 LEPROTL1O95214 131 aa12.03□□□□□ -0.48
PVT1-218ENST00000523328 C1orf195Q5TG92 126 aa12.03□□□□□ -0.48
PVT1-218ENST00000523328 DPM2O94777 84 aa12.02□□□□□ -0.49
PVT1-218ENST00000523328 Q1RN00 199 aa12.02□□□□□ -0.49
PVT1-218ENST00000523328 PMCHL2Q9BQD1 86 aa12.02□□□□□ -0.49
PVT1-218ENST00000523328 PRO1933Q9H354 126 aa12.02□□□□□ -0.49
PVT1-218ENST00000523328 APOC3P02656 99 aa12.01□□□□□ -0.49
PVT1-218ENST00000523328 KRTAP9-7A8MTY7 169 aa12□□□□□ -0.49
PVT1-218ENST00000523328 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.99□□□□□ -0.49
PVT1-218ENST00000523328 IGKCP01834 107 aa11.99□□□□□ -0.49
PVT1-218ENST00000523328 LINC00310P59036 64 aa11.99□□□□□ -0.49
PVT1-218ENST00000523328 OR13C6PQ8NH95 151 aa11.99□□□□□ -0.49
PVT1-218ENST00000523328 SNAPINO95295 136 aa11.98□□□□□ -0.49
PVT1-218ENST00000523328 ELOF1P60002 83 aaKnown RBP11.98□□□□□ -0.49
PVT1-218ENST00000523328 SPANXCQ9NY87 97 aa11.98□□□□□ -0.49
PVT1-218ENST00000523328 TAL2Q16559 108 aa11.97□□□□□ -0.49
PVT1-218ENST00000523328 DEFB105AQ8NG35 78 aa11.96□□□□□ -0.49
PVT1-218ENST00000523328 LINC00308Q8TCZ7 52 aa11.96□□□□□ -0.49
PVT1-218ENST00000523328 LITAFQ99732 161 aa11.96□□□□□ -0.49
PVT1-218ENST00000523328 COX7BP24311 80 aa11.95□□□□□ -0.5
PVT1-218ENST00000523328 SMIM29Q86T20 159 aa11.95□□□□□ -0.5
PVT1-218ENST00000523328 SVBPQ8N300 66 aa11.95□□□□□ -0.5
PVT1-218ENST00000523328 TEX49A0A1B0GTD5 131 aa11.94□□□□□ -0.5
PVT1-218ENST00000523328 SERF1AO75920 110 aa11.94□□□□□ -0.5
PVT1-218ENST00000523328 AKR1D1P51857 326 aa11.94□□□□□ -0.5
PVT1-218ENST00000523328 SPANXDQ9BXN6 97 aa11.94□□□□□ -0.5
PVT1-218ENST00000523328 A0A0G2JQZ4 141 aa11.93□□□□□ -0.5
PVT1-218ENST00000523328 C6orf99Q4VX62 202 aa11.93□□□□□ -0.5
PVT1-218ENST00000523328 HSPB8Q9UJY1 196 aa11.93□□□□□ -0.5
PVT1-218ENST00000523328 E9PLD3 99 aa11.92□□□□□ -0.5
PVT1-218ENST00000523328 FABP4P15090 132 aa11.92□□□□□ -0.5
PVT1-218ENST00000523328 SSPOA2VEC9 5147 aa11.9□□□□□ -0.5
PVT1-218ENST00000523328 NDUFA5Q16718 116 aa11.89□□□□□ -0.51
PVT1-218ENST00000523328 USH2AO75445 5202 aa11.88□□□□□ -0.51
PVT1-218ENST00000523328 TRGC2P03986 189 aa11.88□□□□□ -0.51
PVT1-218ENST00000523328 TIMM17BO60830 172 aa11.86□□□□□ -0.51
PVT1-218ENST00000523328 IGLV5-48A0A075B6I7 105 aa11.85□□□□□ -0.51
PVT1-218ENST00000523328 TRBV7-6A0A0J9YX20 115 aa11.83□□□□□ -0.52
PVT1-218ENST00000523328 LINC00518Q8N0U6 118 aa11.83□□□□□ -0.52
PVT1-218ENST00000523328 Q6Q795 121 aa11.81□□□□□ -0.52
PVT1-218ENST00000523328 TCL1BO95988 128 aa11.8□□□□□ -0.52
PVT1-218ENST00000523328 A0A1B0GWB2 263 aa11.78□□□□□ -0.52
PVT1-218ENST00000523328 KRTAP9-8Q9BYQ0 159 aa11.78□□□□□ -0.52
PVT1-218ENST00000523328 CFC1P0CG37 223 aa11.76□□□□□ -0.53
PVT1-218ENST00000523328 ZNF815PA8K554 130 aa11.75□□□□□ -0.53
PVT1-218ENST00000523328 TTTY13Q9BZ97 58 aa11.75□□□□□ -0.53
PVT1-218ENST00000523328 ATP11AUNQ6ZP68 121 aa11.72□□□□□ -0.53
PVT1-218ENST00000523328 Q75L30 129 aa11.72□□□□□ -0.53
PVT1-218ENST00000523328 SYS1-DBNDD2H3BUS1 97 aa11.71□□□□□ -0.53
PVT1-218ENST00000523328 PCP2Q8IVA1 136 aa11.7□□□□□ -0.54
PVT1-218ENST00000523328 FCGBPQ9Y6R7 5405 aaPredicted RBP11.68□□□□□ -0.54
PVT1-218ENST00000523328 OBSCN-AS1Q96MR7 158 aa11.68□□□□□ -0.54
PVT1-218ENST00000523328 A4D1N5 150 aa11.67□□□□□ -0.54
PVT1-218ENST00000523328 LINC01545Q5VT33 79 aa11.67□□□□□ -0.54
PVT1-218ENST00000523328 A6NDN8 102 aa11.66□□□□□ -0.54
PVT1-218ENST00000523328 NHP2Q9NX24 153 aaKnown RBP11.64□□□□□ -0.55
PVT1-218ENST00000523328 TRBV7-7A0A0K0K1E9 115 aa11.62□□□□□ -0.55
PVT1-218ENST00000523328 F8WEM9 126 aa11.62□□□□□ -0.55
PVT1-218ENST00000523328 C20orf202A1L168 122 aa11.61□□□□□ -0.55
PVT1-218ENST00000523328 IFITM1P13164 125 aa11.6□□□□□ -0.55
PVT1-218ENST00000523328 SCGB1D4Q6XE38 83 aa11.6□□□□□ -0.55
PVT1-218ENST00000523328 PET117Q6UWS5 81 aa11.59□□□□□ -0.55
PVT1-218ENST00000523328 SMIM11BQ8TCY0 68 aa11.59□□□□□ -0.55
PVT1-218ENST00000523328 COPS9Q8WXC6 57 aa11.59□□□□□ -0.55
PVT1-218ENST00000523328 Q6JHZ5 121 aa11.58□□□□□ -0.56
PVT1-218ENST00000523328 IGFL1Q6UW32 110 aa11.58□□□□□ -0.56
PVT1-218ENST00000523328 CLEC2BQ92478 149 aa11.58□□□□□ -0.56
PVT1-218ENST00000523328 COLCA2A8K830 154 aa11.57□□□□□ -0.56
PVT1-218ENST00000523328 MUSTN1Q8IVN3 82 aa11.56□□□□□ -0.56
PVT1-218ENST00000523328 Q6ZVH6 145 aa11.54□□□□□ -0.56
PVT1-218ENST00000523328 KRTAP19-1Q8IUB9 90 aa11.54□□□□□ -0.56
PVT1-218ENST00000523328 TRAV13-2A0A0B4J235 113 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms