RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ALKQ9UM73 1620 aa-0.83□□□□□ -2.54
PCM1-217ENST00000522998 MAP3K1Q13233 1512 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 TRBV7-7A0A0K0K1E9 115 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 C7orf77A4D0Y5 90 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 H0Y9P7 68 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 H0YAA0 97 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 KRTDAPP60985 99 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 GNGT1P63211 74 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 CGREF1Q99674 301 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 S4R3F8 94 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 CEP295Q9C0D2 2601 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 QSER1Q2KHR3 1735 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 CEP290O15078 2479 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 TOPAZ1Q8N9V7 1692 aa-0.84□□□□□ -2.54
PCM1-217ENST00000522998 PZPP20742 1482 aa-0.85□□□□□ -2.55
PCM1-217ENST00000522998 BPTFQ12830 3046 aa-0.85□□□□□ -2.55
PCM1-217ENST00000522998 CRYM-AS1A6NIL9 109 aa-0.85□□□□□ -2.55
PCM1-217ENST00000522998 H3BQF6 201 aa-0.85□□□□□ -2.55
PCM1-217ENST00000522998 EIF4G3O43432 1585 aaKnown RBP-0.85□□□□□ -2.55
PCM1-217ENST00000522998 CLIP1P30622 1438 aa-0.85□□□□□ -2.55
PCM1-217ENST00000522998 DEFB1P60022 68 aa-0.85□□□□□ -2.55
PCM1-217ENST00000522998 DEFB110Q30KQ9 67 aa-0.85□□□□□ -2.55
PCM1-217ENST00000522998 CMYA5Q8N3K9 4069 aa-0.85□□□□□ -2.55
PCM1-217ENST00000522998 ABCA3Q99758 1704 aa-0.86□□□□□ -2.55
PCM1-217ENST00000522998 NDUFA3O95167 84 aa-0.86□□□□□ -2.55
PCM1-217ENST00000522998 ARMS2P0C7Q2 107 aa-0.86□□□□□ -2.55
PCM1-217ENST00000522998 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.86□□□□□ -2.55
PCM1-217ENST00000522998 RGPD3A6NKT7 1758 aaPredicted RBP-0.86□□□□□ -2.55
PCM1-217ENST00000522998 RGPD4Q7Z3J3 1758 aa-0.86□□□□□ -2.55
PCM1-217ENST00000522998 PKD1L3Q7Z443 1732 aa-0.86□□□□□ -2.55
PCM1-217ENST00000522998 CELSR3Q9NYQ7 3312 aa-0.87□□□□□ -2.55
PCM1-217ENST00000522998 TLN2Q9Y4G6 2542 aa-0.87□□□□□ -2.55
PCM1-217ENST00000522998 hADV29S1A0JD25 119 aa-0.87□□□□□ -2.55
PCM1-217ENST00000522998 KRTAP19-5Q3LI72 72 aa-0.87□□□□□ -2.55
PCM1-217ENST00000522998 C2orf88Q9BSF0 95 aa-0.87□□□□□ -2.55
PCM1-217ENST00000522998 DNAH8Q96JB1 4490 aa-0.87□□□□□ -2.55
PCM1-217ENST00000522998 SAMD9Q5K651 1589 aa-0.87□□□□□ -2.55
PCM1-217ENST00000522998 UBR3Q6ZT12 1888 aa-0.88□□□□□ -2.55
PCM1-217ENST00000522998 EYSQ5T1H1 3165 aa-0.88□□□□□ -2.55
PCM1-217ENST00000522998 CRYBG1Q9Y4K1 1723 aa-0.88□□□□□ -2.55
PCM1-217ENST00000522998 TMEM262E9PQX1 116 aa-0.88□□□□□ -2.55
PCM1-217ENST00000522998 VAMP8Q9BV40 100 aa-0.88□□□□□ -2.55
PCM1-217ENST00000522998 USP32Q8NFA0 1604 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 COL6A5A8TX70 2615 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 S100A1P23297 94 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 PSMG4Q5JS54 123 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 TMEM203Q969S6 136 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 PSENENQ9NZ42 101 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 MAGI2Q86UL8 1455 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 LRBAP50851 2863 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 RGPD1P0DJD0 1748 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 FAM135AQ9P2D6 1515 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 ABCC5O15440 1437 aa-0.89□□□□□ -2.55
PCM1-217ENST00000522998 CSMD1Q96PZ7 3565 aa-0.9□□□□□ -2.55
PCM1-217ENST00000522998 TRBV25-1A0A075B6N4 114 aa-0.9□□□□□ -2.55
PCM1-217ENST00000522998 K7EP34 96 aa-0.9□□□□□ -2.55
PCM1-217ENST00000522998 IGLC2P0DOY2 106 aa-0.9□□□□□ -2.55
PCM1-217ENST00000522998 IGLC3P0DOY3 106 aa-0.9□□□□□ -2.55
PCM1-217ENST00000522998 CACFD1Q9UGQ2 172 aa-0.9□□□□□ -2.55
PCM1-217ENST00000522998 GNG8Q9UK08 70 aa-0.9□□□□□ -2.55
PCM1-217ENST00000522998 LRRC7Q96NW7 1537 aa-0.9□□□□□ -2.55
PCM1-217ENST00000522998 CFAP46Q8IYW2 2715 aa-0.9□□□□□ -2.55
PCM1-217ENST00000522998 RGPD8O14715 1765 aaPredicted RBP-0.91□□□□□ -2.55
PCM1-217ENST00000522998 RGPD5Q99666 1765 aa-0.91□□□□□ -2.55
PCM1-217ENST00000522998 PLXNC1O60486 1568 aa-0.91□□□□□ -2.55
PCM1-217ENST00000522998 NRXN1Q9ULB1 1477 aa-0.91□□□□□ -2.55
PCM1-217ENST00000522998 SPENQ96T58 3664 aaKnown RBP-0.91□□□□□ -2.55
PCM1-217ENST00000522998 SUPT6HQ7KZ85 1726 aaKnown RBP-0.91□□□□□ -2.55
PCM1-217ENST00000522998 TIAM2Q8IVF5 1701 aa-0.91□□□□□ -2.55
PCM1-217ENST00000522998 H7BZZ5 65 aa-0.91□□□□□ -2.56
PCM1-217ENST00000522998 MT1XP80297 61 aa-0.91□□□□□ -2.56
PCM1-217ENST00000522998 MRPS10P82664 201 aaKnown RBP-0.91□□□□□ -2.56
PCM1-217ENST00000522998 NMSQ5H8A3 153 aa-0.91□□□□□ -2.56
PCM1-217ENST00000522998 AP4S1Q9Y587 144 aa-0.91□□□□□ -2.56
PCM1-217ENST00000522998 MYO9AB2RTY4 2548 aa-0.91□□□□□ -2.56
PCM1-217ENST00000522998 MLH3Q9UHC1 1453 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 ABCA13Q86UQ4 5058 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 NESP48681 1621 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 ANKRD36CQ5JPF3 1778 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 TMEM218A2RU14 115 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 NDUFC1O43677 76 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 COX7BP24311 80 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 PRLHP81277 87 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 PMCHL1Q16048 86 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.92□□□□□ -2.56
PCM1-217ENST00000522998 POLR1AO95602 1720 aaPredicted RBP-0.92□□□□□ -2.56
PCM1-217ENST00000522998 LRRC9Q6ZRR7 1453 aa-0.92□□□□□ -2.56
PCM1-217ENST00000522998 MGAQ8IWI9 3026 aa-0.93□□□□□ -2.56
PCM1-217ENST00000522998 ADGRG4Q8IZF6 3080 aa-0.93□□□□□ -2.56
PCM1-217ENST00000522998 LINC00587B1AMM8 73 aa-0.93□□□□□ -2.56
PCM1-217ENST00000522998 LINC00158P58513 81 aa-0.93□□□□□ -2.56
PCM1-217ENST00000522998 COX6B2Q6YFQ2 88 aa-0.93□□□□□ -2.56
PCM1-217ENST00000522998 GTF2H5Q6ZYL4 71 aa-0.93□□□□□ -2.56
PCM1-217ENST00000522998 UBE2D4Q9Y2X8 147 aa-0.93□□□□□ -2.56
PCM1-217ENST00000522998 PRDM15P57071 1507 aaPredicted RBP-0.94□□□□□ -2.56
PCM1-217ENST00000522998 DNAH7Q8WXX0 4024 aa-0.94□□□□□ -2.56
PCM1-217ENST00000522998 MPC2O95563 127 aa-0.94□□□□□ -2.56
PCM1-217ENST00000522998 UQCRHP07919 91 aa-0.94□□□□□ -2.56
PCM1-217ENST00000522998 DEFB106AQ8N104 65 aa-0.94□□□□□ -2.56
PCM1-217ENST00000522998 SPTBN5Q9NRC6 3674 aaKnown RBP-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms