RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 HINT1P49773 126 aaPredicted RBP7.35□□□□□ -1.23
PVT1-215ENST00000522963 KCNQ1DNQ9H478 68 aa7.35□□□□□ -1.23
PVT1-215ENST00000522963 A0A0B4J2C4 111 aa7.34□□□□□ -1.23
PVT1-215ENST00000522963 PRYO14603 147 aa7.34□□□□□ -1.23
PVT1-215ENST00000522963 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
PVT1-215ENST00000522963 TRAV23DV6A0A075B6W5 121 aa7.33□□□□□ -1.24
PVT1-215ENST00000522963 M0R143 59 aa7.33□□□□□ -1.24
PVT1-215ENST00000522963 RPL13AP40429 203 aaKnown RBP7.33□□□□□ -1.24
PVT1-215ENST00000522963 C1orf137Q5JT78 98 aa7.33□□□□□ -1.24
PVT1-215ENST00000522963 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
PVT1-215ENST00000522963 RAB37Q96AX2 223 aa7.33□□□□□ -1.24
PVT1-215ENST00000522963 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
PVT1-215ENST00000522963 J3QL48 77 aa7.32□□□□□ -1.24
PVT1-215ENST00000522963 K7ERJ3 54 aa7.32□□□□□ -1.24
PVT1-215ENST00000522963 SPRR1AP35321 89 aa7.32□□□□□ -1.24
PVT1-215ENST00000522963 PCP4L1A6NKN8 68 aa7.31□□□□□ -1.24
PVT1-215ENST00000522963 BCE1O60756 84 aa7.31□□□□□ -1.24
PVT1-215ENST00000522963 SMIM11BQ8TCY0 68 aa7.31□□□□□ -1.24
PVT1-215ENST00000522963 KRTAP4-16G5E9R7 235 aaPredicted RBP7.3□□□□□ -1.24
PVT1-215ENST00000522963 H7C2G1 150 aa7.3□□□□□ -1.24
PVT1-215ENST00000522963 ZNF73O43830 326 aaPredicted RBP7.3□□□□□ -1.24
PVT1-215ENST00000522963 PRO1854Q9UHT4 67 aa7.3□□□□□ -1.24
PVT1-215ENST00000522963 CBY1Q9Y3M2 126 aa7.3□□□□□ -1.24
PVT1-215ENST00000522963 IGLV7-43P04211 117 aa7.29□□□□□ -1.24
PVT1-215ENST00000522963 BATFQ16520 125 aa7.29□□□□□ -1.24
PVT1-215ENST00000522963 FAM19A1Q7Z5A9 133 aa7.29□□□□□ -1.24
PVT1-215ENST00000522963 DIRC1Q969H9 104 aa7.29□□□□□ -1.24
PVT1-215ENST00000522963 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
PVT1-215ENST00000522963 ETDCA0A1B0GVM5 59 aa7.28□□□□□ -1.24
PVT1-215ENST00000522963 C6orf99Q4VX62 202 aa7.28□□□□□ -1.24
PVT1-215ENST00000522963 B5MCH6 92 aa7.27□□□□□ -1.25
PVT1-215ENST00000522963 UBE2AP49459 152 aa7.27□□□□□ -1.25
PVT1-215ENST00000522963 PRLHP81277 87 aa7.27□□□□□ -1.25
PVT1-215ENST00000522963 KRTAP13-1Q8IUC0 172 aa7.27□□□□□ -1.25
PVT1-215ENST00000522963 KRTAP29-1A8MX34 341 aaPredicted RBP7.26□□□□□ -1.25
PVT1-215ENST00000522963 RPL28P46779 137 aaKnown RBP7.26□□□□□ -1.25
PVT1-215ENST00000522963 ZNF861PO60384 105 aa7.25□□□□□ -1.25
PVT1-215ENST00000522963 TSPAN13O95857 204 aa7.25□□□□□ -1.25
PVT1-215ENST00000522963 Q1RN00 199 aa7.25□□□□□ -1.25
PVT1-215ENST00000522963 SNHG12Q9BXW3 62 aa7.25□□□□□ -1.25
PVT1-215ENST00000522963 TRBV7-6A0A0J9YX20 115 aa7.24□□□□□ -1.25
PVT1-215ENST00000522963 H0Y9J4 135 aa7.24□□□□□ -1.25
PVT1-215ENST00000522963 OXTP01178 125 aa7.24□□□□□ -1.25
PVT1-215ENST00000522963 COX7BP24311 80 aa7.24□□□□□ -1.25
PVT1-215ENST00000522963 ELOF1P60002 83 aaKnown RBP7.24□□□□□ -1.25
PVT1-215ENST00000522963 SPINK6Q6UWN8 80 aa7.24□□□□□ -1.25
PVT1-215ENST00000522963 Q6ZRX8 168 aa7.24□□□□□ -1.25
PVT1-215ENST00000522963 Q9BRP9 147 aa7.23□□□□□ -1.25
PVT1-215ENST00000522963 TRIAP1O43715 76 aa7.22□□□□□ -1.25
PVT1-215ENST00000522963 SMCR5Q8TEV8 140 aa7.22□□□□□ -1.25
PVT1-215ENST00000522963 PKHD1L1Q86WI1 4243 aa7.22□□□□□ -1.25
PVT1-215ENST00000522963 HERC1Q15751 4861 aa7.21□□□□□ -1.26
PVT1-215ENST00000522963 VAMP3Q15836 100 aa7.21□□□□□ -1.26
PVT1-215ENST00000522963 HIGD2AQ9BW72 106 aa7.21□□□□□ -1.26
PVT1-215ENST00000522963 ERC2-IT1O76042 136 aa7.2□□□□□ -1.26
PVT1-215ENST00000522963 PSMB2P49721 201 aa7.2□□□□□ -1.26
PVT1-215ENST00000522963 MYCBP2O75592 4640 aa7.2□□□□□ -1.26
PVT1-215ENST00000522963 TAX1BP3O14907 124 aa7.19□□□□□ -1.26
PVT1-215ENST00000522963 LINC00575Q6W349 94 aa7.19□□□□□ -1.26
PVT1-215ENST00000522963 NAA38Q9BRA0 125 aaKnown RBP7.19□□□□□ -1.26
PVT1-215ENST00000522963 DHRS4-AS1Q9P1J3 65 aa7.19□□□□□ -1.26
PVT1-215ENST00000522963 H0YGX0 51 aa7.17□□□□□ -1.26
PVT1-215ENST00000522963 COL5A1-AS1Q5SY13 56 aa7.17□□□□□ -1.26
PVT1-215ENST00000522963 FAM218AQ96MZ4 157 aa7.17□□□□□ -1.26
PVT1-215ENST00000522963 COX6CP09669 75 aa7.16□□□□□ -1.26
PVT1-215ENST00000522963 CLEC2BQ92478 149 aa7.16□□□□□ -1.26
PVT1-215ENST00000522963 hADV29S1A0JD25 119 aa7.15□□□□□ -1.26
PVT1-215ENST00000522963 C9orf118A6NHY6 69 aa7.15□□□□□ -1.26
PVT1-215ENST00000522963 H3BUT2 72 aa7.15□□□□□ -1.26
PVT1-215ENST00000522963 SCGB1C2P0DMR2 95 aa7.15□□□□□ -1.26
PVT1-215ENST00000522963 ST20-AS1Q8NBB2 130 aa7.15□□□□□ -1.26
PVT1-215ENST00000522963 LRP1Q07954 4544 aaKnown RBP7.14□□□□□ -1.27
PVT1-215ENST00000522963 SLC25A20O43772 301 aa7.14□□□□□ -1.27
PVT1-215ENST00000522963 MT1HL1P0DM35 61 aa7.14□□□□□ -1.27
PVT1-215ENST00000522963 LINC01600Q96MT4 127 aa7.14□□□□□ -1.27
PVT1-215ENST00000522963 SPRR4Q96PI1 79 aa7.14□□□□□ -1.27
PVT1-215ENST00000522963 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
PVT1-215ENST00000522963 ANAPC11Q9NYG5 84 aa7.12□□□□□ -1.27
PVT1-215ENST00000522963 ZNF706Q9Y5V0 76 aaPredicted RBP7.12□□□□□ -1.27
PVT1-215ENST00000522963 A0A1B0GX51 115 aa7.11□□□□□ -1.27
PVT1-215ENST00000522963 A0A1W2PPM0 123 aa7.11□□□□□ -1.27
PVT1-215ENST00000522963 LINC01547P58512 204 aaPredicted RBP7.11□□□□□ -1.27
PVT1-215ENST00000522963 GAGE2AQ6NT46 116 aa7.11□□□□□ -1.27
PVT1-215ENST00000522963 Q6ZQY7 126 aa7.11□□□□□ -1.27
PVT1-215ENST00000522963 FAT3Q8TDW7 4589 aa7.11□□□□□ -1.27
PVT1-215ENST00000522963 LST1O00453 97 aa7.1□□□□□ -1.27
PVT1-215ENST00000522963 TCL1BO95988 128 aa7.1□□□□□ -1.27
PVT1-215ENST00000522963 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.1□□□□□ -1.27
PVT1-215ENST00000522963 DEFB105AQ8NG35 78 aa7.1□□□□□ -1.27
PVT1-215ENST00000522963 SNCGO76070 127 aa7.09□□□□□ -1.27
PVT1-215ENST00000522963 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
PVT1-215ENST00000522963 LYRM7Q5U5X0 104 aa7.09□□□□□ -1.27
PVT1-215ENST00000522963 PRR26Q8N8Z3 221 aa7.09□□□□□ -1.27
PVT1-215ENST00000522963 IGLV5-48A0A075B6I7 105 aa7.08□□□□□ -1.28
PVT1-215ENST00000522963 SPRR1BP22528 89 aa7.08□□□□□ -1.28
PVT1-215ENST00000522963 TEX49A0A1B0GTD5 131 aa7.07□□□□□ -1.28
PVT1-215ENST00000522963 TRACP01848 142 aa7.07□□□□□ -1.28
PVT1-215ENST00000522963 FABP2P12104 132 aa7.07□□□□□ -1.28
PVT1-215ENST00000522963 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
PVT1-215ENST00000522963 ATXN8Q156A1 80 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms