RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 Q9BRP9 147 aa10.45□□□□□ -0.74
CLK4-211ENST00000522556 LRP2P98164 4655 aa10.45□□□□□ -0.74
CLK4-211ENST00000522556 TSPAN13O95857 204 aa10.44□□□□□ -0.74
CLK4-211ENST00000522556 SCGB1D4Q6XE38 83 aa10.44□□□□□ -0.74
CLK4-211ENST00000522556 TRAV23DV6A0A075B6W5 121 aa10.43□□□□□ -0.74
CLK4-211ENST00000522556 SPANXCQ9NY87 97 aa10.43□□□□□ -0.74
CLK4-211ENST00000522556 SPANXDQ9BXN6 97 aa10.42□□□□□ -0.74
CLK4-211ENST00000522556 PPDPFQ9H3Y8 114 aa10.42□□□□□ -0.74
CLK4-211ENST00000522556 UBR4Q5T4S7 5183 aa10.42□□□□□ -0.74
CLK4-211ENST00000522556 C5orf52A6NGY3 159 aa10.41□□□□□ -0.74
CLK4-211ENST00000522556 Q6ZRX8 168 aa10.41□□□□□ -0.74
CLK4-211ENST00000522556 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
CLK4-211ENST00000522556 S100A12P80511 92 aa10.39□□□□□ -0.75
CLK4-211ENST00000522556 OR13C6PQ8NH95 151 aa10.39□□□□□ -0.75
CLK4-211ENST00000522556 LPAP08519 4548 aa10.38□□□□□ -0.75
CLK4-211ENST00000522556 AKR1D1P51857 326 aa10.36□□□□□ -0.75
CLK4-211ENST00000522556 MUSTN1Q8IVN3 82 aa10.36□□□□□ -0.75
CLK4-211ENST00000522556 LINC00304Q8N9R0 145 aa10.36□□□□□ -0.75
CLK4-211ENST00000522556 ZNF706Q9Y5V0 76 aaPredicted RBP10.36□□□□□ -0.75
CLK4-211ENST00000522556 GAGE2AQ6NT46 116 aa10.35□□□□□ -0.75
CLK4-211ENST00000522556 SCGB1D1O95968 90 aa10.34□□□□□ -0.75
CLK4-211ENST00000522556 LINC00483Q53H64 154 aa10.34□□□□□ -0.75
CLK4-211ENST00000522556 PRR4Q16378 134 aa10.33□□□□□ -0.76
CLK4-211ENST00000522556 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
CLK4-211ENST00000522556 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.76
CLK4-211ENST00000522556 HSBP1L1C9JCN9 74 aa10.31□□□□□ -0.76
CLK4-211ENST00000522556 IFITM1P13164 125 aa10.31□□□□□ -0.76
CLK4-211ENST00000522556 C6orf99Q4VX62 202 aa10.3□□□□□ -0.76
CLK4-211ENST00000522556 LINC00518Q8N0U6 118 aa10.3□□□□□ -0.76
CLK4-211ENST00000522556 Q6ZVH6 145 aa10.29□□□□□ -0.76
CLK4-211ENST00000522556 IGLV9-49A0A0B4J1Y8 123 aa10.28□□□□□ -0.76
CLK4-211ENST00000522556 Q8NBF4 154 aa10.28□□□□□ -0.76
CLK4-211ENST00000522556 MOBPQ13875 183 aa10.27□□□□□ -0.77
CLK4-211ENST00000522556 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.77
CLK4-211ENST00000522556 A6NDN8 102 aa10.26□□□□□ -0.77
CLK4-211ENST00000522556 ELOF1P60002 83 aaKnown RBP10.26□□□□□ -0.77
CLK4-211ENST00000522556 COX7BP24311 80 aa10.25□□□□□ -0.77
CLK4-211ENST00000522556 HINT1P49773 126 aaPredicted RBP10.24□□□□□ -0.77
CLK4-211ENST00000522556 COPS9Q8WXC6 57 aa10.24□□□□□ -0.77
CLK4-211ENST00000522556 CBY1Q9Y3M2 126 aa10.24□□□□□ -0.77
CLK4-211ENST00000522556 A4D1N5 150 aa10.23□□□□□ -0.77
CLK4-211ENST00000522556 COX8AP10176 69 aa10.23□□□□□ -0.77
CLK4-211ENST00000522556 PAM16Q9Y3D7 125 aa10.23□□□□□ -0.77
CLK4-211ENST00000522556 C14orf144Q96I85 54 aa10.22□□□□□ -0.77
CLK4-211ENST00000522556 SMIM11BQ8TCY0 68 aa10.21□□□□□ -0.77
CLK4-211ENST00000522556 C12orf57Q99622 126 aa10.21□□□□□ -0.77
CLK4-211ENST00000522556 SPATA45Q537H7 98 aa10.2□□□□□ -0.78
CLK4-211ENST00000522556 DHRS4-AS1Q9P1J3 65 aa10.2□□□□□ -0.78
CLK4-211ENST00000522556 TMA7Q9Y2S6 64 aaKnown RBP10.2□□□□□ -0.78
CLK4-211ENST00000522556 TRAV13-2A0A0B4J235 113 aa10.18□□□□□ -0.78
CLK4-211ENST00000522556 C9orf153Q5TBE3 101 aa10.18□□□□□ -0.78
CLK4-211ENST00000522556 SPRR1BP22528 89 aa10.17□□□□□ -0.78
CLK4-211ENST00000522556 SPAG11AQ6PDA7 123 aa10.17□□□□□ -0.78
CLK4-211ENST00000522556 TRBV7-6A0A0J9YX20 115 aa10.16□□□□□ -0.78
CLK4-211ENST00000522556 A0A1B0GWB2 263 aa10.16□□□□□ -0.78
CLK4-211ENST00000522556 DLEU1O43261 78 aa10.16□□□□□ -0.78
CLK4-211ENST00000522556 C2orf91Q6ZV80 131 aa10.16□□□□□ -0.78
CLK4-211ENST00000522556 HIST1H4GQ99525 98 aa10.16□□□□□ -0.78
CLK4-211ENST00000522556 VAMP8Q9BV40 100 aa10.16□□□□□ -0.78
CLK4-211ENST00000522556 DEFB105AQ8NG35 78 aa10.15□□□□□ -0.78
CLK4-211ENST00000522556 RNF213Q63HN8 5207 aa10.15□□□□□ -0.79
CLK4-211ENST00000522556 LINC01547P58512 204 aaPredicted RBP10.14□□□□□ -0.79
CLK4-211ENST00000522556 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
CLK4-211ENST00000522556 PYY3Q5JQD4 70 aa10.14□□□□□ -0.79
CLK4-211ENST00000522556 SSBP3-AS1Q7Z2R9 100 aa10.14□□□□□ -0.79
CLK4-211ENST00000522556 Q1RN00 199 aa10.13□□□□□ -0.79
CLK4-211ENST00000522556 IGLV7-46A0A075B6I9 117 aa10.12□□□□□ -0.79
CLK4-211ENST00000522556 SPINK1P00995 79 aa10.11□□□□□ -0.79
CLK4-211ENST00000522556 CTAG1AP78358 180 aa10.11□□□□□ -0.79
CLK4-211ENST00000522556 TAL2Q16559 108 aa10.1□□□□□ -0.79
CLK4-211ENST00000522556 SMIM29Q86T20 159 aa10.1□□□□□ -0.79
CLK4-211ENST00000522556 SLC25A34Q6PIV7 304 aa10.09□□□□□ -0.79
CLK4-211ENST00000522556 Q8N377 158 aa10.09□□□□□ -0.79
CLK4-211ENST00000522556 HIGD1BQ9P298 99 aa10.09□□□□□ -0.79
CLK4-211ENST00000522556 IGLV5-48A0A075B6I7 105 aa10.08□□□□□ -0.8
CLK4-211ENST00000522556 A0A0G2JQZ4 141 aa10.07□□□□□ -0.8
CLK4-211ENST00000522556 TEX49A0A1B0GTD5 131 aa10.07□□□□□ -0.8
CLK4-211ENST00000522556 CFC1BP0CG36 223 aa10.07□□□□□ -0.8
CLK4-211ENST00000522556 CFC1P0CG37 223 aa10.07□□□□□ -0.8
CLK4-211ENST00000522556 LAMTOR3Q9UHA4 124 aa10.07□□□□□ -0.8
CLK4-211ENST00000522556 TPRXLQ17RH7 258 aa10.06□□□□□ -0.8
CLK4-211ENST00000522556 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
CLK4-211ENST00000522556 LINC00575Q6W349 94 aa10.06□□□□□ -0.8
CLK4-211ENST00000522556 H7C2G1 150 aa10.05□□□□□ -0.8
CLK4-211ENST00000522556 RPS29P62273 56 aaKnown RBP10.04□□□□□ -0.8
CLK4-211ENST00000522556 FP248Q71RG6 208 aaPredicted RBP10.02□□□□□ -0.81
CLK4-211ENST00000522556 FXYD2P54710 66 aa10.01□□□□□ -0.81
CLK4-211ENST00000522556 Q6ZQY7 126 aa10.01□□□□□ -0.81
CLK4-211ENST00000522556 CEND1Q8N111 149 aa10.01□□□□□ -0.81
CLK4-211ENST00000522556 NHP2Q9NX24 153 aaKnown RBP10.01□□□□□ -0.81
CLK4-211ENST00000522556 VAMP3Q15836 100 aa10□□□□□ -0.81
CLK4-211ENST00000522556 KRTAP13-3Q3SY46 172 aa10□□□□□ -0.81
CLK4-211ENST00000522556 CDIP1Q9H305 208 aa10□□□□□ -0.81
CLK4-211ENST00000522556 A0A0B4J2C4 111 aa9.99□□□□□ -0.81
CLK4-211ENST00000522556 hADV29S1A0JD25 119 aa9.99□□□□□ -0.81
CLK4-211ENST00000522556 SLC25A20O43772 301 aa9.99□□□□□ -0.81
CLK4-211ENST00000522556 RAB37Q96AX2 223 aa9.99□□□□□ -0.81
CLK4-211ENST00000522556 PRO1933Q9H354 126 aa9.97□□□□□ -0.81
CLK4-211ENST00000522556 FAM218AQ96MZ4 157 aa9.96□□□□□ -0.82
CLK4-211ENST00000522556 BVES-AS1Q5T3Y7 98 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms