RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 NBPF19A0A087WUL8 3843 aa3.14□□□□□ -1.91
CNOT8-220ENST00000522139 LECT2O14960 151 aa3.14□□□□□ -1.91
CNOT8-220ENST00000522139 LINC00158P58513 81 aa3.14□□□□□ -1.91
CNOT8-220ENST00000522139 LINC00575Q6W349 94 aa3.14□□□□□ -1.91
CNOT8-220ENST00000522139 MRPL55Q7Z7F7 128 aaKnown RBP3.14□□□□□ -1.91
CNOT8-220ENST00000522139 UBL5Q9BZL1 73 aa3.14□□□□□ -1.91
CNOT8-220ENST00000522139 NOP10Q9NPE3 64 aaKnown RBP3.14□□□□□ -1.91
CNOT8-220ENST00000522139 CENPEQ02224 2701 aa3.13□□□□□ -1.91
CNOT8-220ENST00000522139 IGLV4-60A0A075B6I1 120 aa3.13□□□□□ -1.91
CNOT8-220ENST00000522139 TRGV2A0A075B6R0 118 aa3.13□□□□□ -1.91
CNOT8-220ENST00000522139 TRGV4A0A0C4DH28 118 aa3.13□□□□□ -1.91
CNOT8-220ENST00000522139 H3BNG1 76 aa3.13□□□□□ -1.91
CNOT8-220ENST00000522139 HTN1P15515 57 aa3.13□□□□□ -1.91
CNOT8-220ENST00000522139 NPC2P61916 151 aa3.13□□□□□ -1.91
CNOT8-220ENST00000522139 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.13□□□□□ -1.91
CNOT8-220ENST00000522139 Q6ZQT0 140 aa3.13□□□□□ -1.91
CNOT8-220ENST00000522139 EPG5Q9HCE0 2579 aa3.12□□□□□ -1.91
CNOT8-220ENST00000522139 TRBV7-4A0A0J9YYF1 115 aa3.12□□□□□ -1.91
CNOT8-220ENST00000522139 PRR3P79522 188 aaKnown RBP3.12□□□□□ -1.91
CNOT8-220ENST00000522139 RBM3P98179 157 aaKnown RBP3.12□□□□□ -1.91
CNOT8-220ENST00000522139 FAM19A5Q7Z5A7 132 aaPredicted RBP3.12□□□□□ -1.91
CNOT8-220ENST00000522139 DEFB104AQ8WTQ1 72 aa3.12□□□□□ -1.91
CNOT8-220ENST00000522139 C14orf132Q9NPU4 83 aa3.12□□□□□ -1.91
CNOT8-220ENST00000522139 APCP25054 2843 aa3.12□□□□□ -1.91
CNOT8-220ENST00000522139 NF1P21359 2839 aa3.11□□□□□ -1.91
CNOT8-220ENST00000522139 OXTP01178 125 aa3.11□□□□□ -1.91
CNOT8-220ENST00000522139 PRM2P04554 102 aa3.11□□□□□ -1.91
CNOT8-220ENST00000522139 DEFB136Q30KP8 78 aa3.11□□□□□ -1.91
CNOT8-220ENST00000522139 FBN2P35556 2912 aa3.11□□□□□ -1.91
CNOT8-220ENST00000522139 ITPR3Q14573 2671 aa3.1□□□□□ -1.91
CNOT8-220ENST00000522139 JMJD1CQ15652 2540 aa3.1□□□□□ -1.91
CNOT8-220ENST00000522139 IGLV1-50A0A075B6I6 118 aa3.1□□□□□ -1.91
CNOT8-220ENST00000522139 IGKV2D-24A0A075B6R9 120 aa3.1□□□□□ -1.91
CNOT8-220ENST00000522139 LELP1Q5T871 98 aa3.1□□□□□ -1.91
CNOT8-220ENST00000522139 SERP1Q9Y6X1 66 aa3.1□□□□□ -1.91
CNOT8-220ENST00000522139 H7BZZ5 65 aa3.09□□□□□ -1.91
CNOT8-220ENST00000522139 NCR3O14931 201 aa3.09□□□□□ -1.91
CNOT8-220ENST00000522139 MIFP14174 115 aa3.09□□□□□ -1.91
CNOT8-220ENST00000522139 PFN2P35080 140 aa3.09□□□□□ -1.91
CNOT8-220ENST00000522139 XCL1P47992 114 aa3.09□□□□□ -1.91
CNOT8-220ENST00000522139 ELOF1P60002 83 aaKnown RBP3.09□□□□□ -1.91
CNOT8-220ENST00000522139 SYCNQ0VAF6 134 aa3.09□□□□□ -1.91
CNOT8-220ENST00000522139 TOMM7Q9P0U1 55 aa3.09□□□□□ -1.91
CNOT8-220ENST00000522139 FAM208BQ5VWN6 2430 aa3.09□□□□□ -1.92
CNOT8-220ENST00000522139 LCE6AA0A183 80 aa3.08□□□□□ -1.92
CNOT8-220ENST00000522139 C6orf99Q4VX62 202 aa3.08□□□□□ -1.92
CNOT8-220ENST00000522139 LINC00483Q53H64 154 aa3.08□□□□□ -1.92
CNOT8-220ENST00000522139 DSCR8Q96T75 97 aa3.08□□□□□ -1.92
CNOT8-220ENST00000522139 ANK3Q12955 4377 aaKnown RBP3.08□□□□□ -1.92
CNOT8-220ENST00000522139 WNK1Q9H4A3 2382 aa3.08□□□□□ -1.92
CNOT8-220ENST00000522139 ZNF462Q96JM2 2506 aa3.08□□□□□ -1.92
CNOT8-220ENST00000522139 POLQO75417 2590 aa3.07□□□□□ -1.92
CNOT8-220ENST00000522139 ABCA12Q86UK0 2595 aa3.07□□□□□ -1.92
CNOT8-220ENST00000522139 IGLV5-48A0A075B6I7 105 aa3.07□□□□□ -1.92
CNOT8-220ENST00000522139 SMIM26A0A096LP01 95 aa3.07□□□□□ -1.92
CNOT8-220ENST00000522139 IGKV3D-7A0A0C4DH55 119 aa3.07□□□□□ -1.92
CNOT8-220ENST00000522139 COX7BP24311 80 aa3.07□□□□□ -1.92
CNOT8-220ENST00000522139 Q5XG85 94 aa3.07□□□□□ -1.92
CNOT8-220ENST00000522139 NIPBLQ6KC79 2804 aaeCLIP3.07□□□□□ -1.92
CNOT8-220ENST00000522139 FAM236DA0A1B0GTK5 79 aa3.06□□□□□ -1.92
CNOT8-220ENST00000522139 M0R378 163 aa3.06□□□□□ -1.92
CNOT8-220ENST00000522139 FAM236CP0DP71 79 aa3.06□□□□□ -1.92
CNOT8-220ENST00000522139 FLNAP21333 2647 aaKnown RBP3.06□□□□□ -1.92
CNOT8-220ENST00000522139 ZFYVE26Q68DK2 2539 aa3.06□□□□□ -1.92
CNOT8-220ENST00000522139 WFDC9Q8NEX5 89 aa3.06□□□□□ -1.92
CNOT8-220ENST00000522139 DIRC1Q969H9 104 aa3.06□□□□□ -1.92
CNOT8-220ENST00000522139 CAMK2N2Q96S95 79 aa3.06□□□□□ -1.92
CNOT8-220ENST00000522139 ZNF469Q96JG9 3925 aaPredicted RBP3.06□□□□□ -1.92
CNOT8-220ENST00000522139 USP24Q9UPU5 2620 aa3.06□□□□□ -1.92
CNOT8-220ENST00000522139 HIVEP2P31629 2446 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 TRAV23DV6A0A075B6W5 121 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 A0A087WVE0 104 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 A0A0U1RQV1 116 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 ZNF73O43830 326 aaPredicted RBP3.05□□□□□ -1.92
CNOT8-220ENST00000522139 SPAG11BQ08648 103 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 Q5W150 140 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 KRTAP26-1Q6PEX3 210 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 ENHOQ6UWT2 76 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 LINC00269Q8N2A0 174 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 Q8NAQ8 132 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 CYSTM1Q9H1C7 97 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 KCNQ1DNQ9H478 68 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 PDZD2O15018 2839 aa3.05□□□□□ -1.92
CNOT8-220ENST00000522139 KMT2BQ9UMN6 2715 aaPredicted RBP3.04□□□□□ -1.92
CNOT8-220ENST00000522139 PRB2P02812 416 aaPredicted RBP3.04□□□□□ -1.92
CNOT8-220ENST00000522139 SPART-AS1P0CW21 52 aa3.04□□□□□ -1.92
CNOT8-220ENST00000522139 Q6ZQY7 126 aa3.04□□□□□ -1.92
CNOT8-220ENST00000522139 FAM19A1Q7Z5A9 133 aa3.04□□□□□ -1.92
CNOT8-220ENST00000522139 Q8NDZ9 215 aa3.04□□□□□ -1.92
CNOT8-220ENST00000522139 LAMTOR3Q9UHA4 124 aa3.04□□□□□ -1.92
CNOT8-220ENST00000522139 PRO0628Q9UI54 55 aa3.04□□□□□ -1.92
CNOT8-220ENST00000522139 GCN1Q92616 2671 aaKnown RBP3.03□□□□□ -1.92
CNOT8-220ENST00000522139 ANGP03950 147 aaKnown RBP3.03□□□□□ -1.92
CNOT8-220ENST00000522139 SPRR1AP35321 89 aa3.03□□□□□ -1.92
CNOT8-220ENST00000522139 UNQ6190/PRO20217Q6UXQ8 127 aa3.03□□□□□ -1.92
CNOT8-220ENST00000522139 C20orf197Q8N268 126 aa3.03□□□□□ -1.92
CNOT8-220ENST00000522139 SPRR4Q96PI1 79 aa3.03□□□□□ -1.92
CNOT8-220ENST00000522139 SONP18583 2426 aaKnown RBP3.02□□□□□ -1.93
CNOT8-220ENST00000522139 SETD2Q9BYW2 2564 aaPredicted RBP3.02□□□□□ -1.93
CNOT8-220ENST00000522139 A0A096LPF7 62 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms