RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 H7BZZ5 65 aa10.82□□□□□ -0.68
USP42-207ENST00000521713 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
USP42-207ENST00000521713 C7orf65Q6ZTY9 151 aa10.81□□□□□ -0.68
USP42-207ENST00000521713 PRR34Q9NV39 138 aa10.8□□□□□ -0.68
USP42-207ENST00000521713 EPM2AB3EWF7 344 aa10.79□□□□□ -0.68
USP42-207ENST00000521713 LINC01600Q96MT4 127 aa10.79□□□□□ -0.68
USP42-207ENST00000521713 SPACA4Q8TDM5 124 aa10.78□□□□□ -0.68
USP42-207ENST00000521713 CHTF8P0CG12 524 aa10.78□□□□□ -0.68
USP42-207ENST00000521713 CENPEQ02224 2701 aa10.77□□□□□ -0.68
USP42-207ENST00000521713 PLA2G1BP04054 148 aaKnown RBP10.77□□□□□ -0.69
USP42-207ENST00000521713 COA5Q86WW8 74 aa10.77□□□□□ -0.69
USP42-207ENST00000521713 IGKV2D-30A0A075B6S6 120 aa10.76□□□□□ -0.69
USP42-207ENST00000521713 IGKV2-30P06310 120 aa10.76□□□□□ -0.69
USP42-207ENST00000521713 ZNF292O60281 2723 aa10.76□□□□□ -0.69
USP42-207ENST00000521713 A8MWP4 228 aa10.75□□□□□ -0.69
USP42-207ENST00000521713 TYMSOSQ8TAI1 123 aa10.75□□□□□ -0.69
USP42-207ENST00000521713 KTN1-AS1Q86SY8 53 aa10.75□□□□□ -0.69
USP42-207ENST00000521713 HTTP42858 3142 aa10.72□□□□□ -0.69
USP42-207ENST00000521713 RANBP2P49792 3224 aaKnown RBP10.72□□□□□ -0.69
USP42-207ENST00000521713 K7EQZ3 153 aa10.71□□□□□ -0.7
USP42-207ENST00000521713 UQCR11O14957 56 aa10.7□□□□□ -0.7
USP42-207ENST00000521713 RPL37AP61513 92 aaKnown RBP10.69□□□□□ -0.7
USP42-207ENST00000521713 BPTFQ12830 3046 aa10.69□□□□□ -0.7
USP42-207ENST00000521713 LINC00528Q8N1L1 170 aa10.69□□□□□ -0.7
USP42-207ENST00000521713 LCA10Q71F78 164 aa10.68□□□□□ -0.7
USP42-207ENST00000521713 A0A087WTM6 91 aa10.68□□□□□ -0.7
USP42-207ENST00000521713 KCNQ1DNQ9H478 68 aa10.67□□□□□ -0.7
USP42-207ENST00000521713 ST20-AS1Q8NBB2 130 aa10.67□□□□□ -0.7
USP42-207ENST00000521713 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
USP42-207ENST00000521713 C15orf56Q8N910 161 aa10.66□□□□□ -0.7
USP42-207ENST00000521713 APLNQ9ULZ1 77 aa10.66□□□□□ -0.7
USP42-207ENST00000521713 PRR15Q8IV56 129 aa10.66□□□□□ -0.7
USP42-207ENST00000521713 IGLV1-50A0A075B6I6 118 aa10.66□□□□□ -0.7
USP42-207ENST00000521713 C9orf163Q8N9P6 203 aa10.66□□□□□ -0.7
USP42-207ENST00000521713 C5orf42Q9H799 3197 aa10.65□□□□□ -0.7
USP42-207ENST00000521713 FAM168BA1KXE4 195 aa10.65□□□□□ -0.71
USP42-207ENST00000521713 MRPL34Q9BQ48 92 aaKnown RBP10.64□□□□□ -0.71
USP42-207ENST00000521713 TRANK1O15050 2925 aa10.64□□□□□ -0.71
USP42-207ENST00000521713 SPANXA2-OT1Q8N9U9 137 aa10.63□□□□□ -0.71
USP42-207ENST00000521713 LINC00313P59037 77 aa10.63□□□□□ -0.71
USP42-207ENST00000521713 TLX1NBP0CAT3 122 aa10.61□□□□□ -0.71
USP42-207ENST00000521713 OBSCN-AS1Q96MR7 158 aa10.6□□□□□ -0.71
USP42-207ENST00000521713 J3QL48 77 aa10.6□□□□□ -0.71
USP42-207ENST00000521713 SPINT4Q6UDR6 99 aa10.58□□□□□ -0.72
USP42-207ENST00000521713 PLA2G2DQ9UNK4 145 aa10.57□□□□□ -0.72
USP42-207ENST00000521713 ZNF861PO60384 105 aa10.57□□□□□ -0.72
USP42-207ENST00000521713 MIR22HGQ0VDD5 57 aa10.57□□□□□ -0.72
USP42-207ENST00000521713 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
USP42-207ENST00000521713 BRCA2P51587 3418 aa10.56□□□□□ -0.72
USP42-207ENST00000521713 MKI67P46013 3256 aaKnown RBP10.55□□□□□ -0.72
USP42-207ENST00000521713 Q1T7F1 81 aa10.55□□□□□ -0.72
USP42-207ENST00000521713 SSBP3-AS1Q7Z2R9 100 aa10.55□□□□□ -0.72
USP42-207ENST00000521713 CDC42SE1Q9NRR8 79 aa10.55□□□□□ -0.72
USP42-207ENST00000521713 CNBPP62633 177 aaKnown RBP10.55□□□□□ -0.72
USP42-207ENST00000521713 TEP1Q99973 2627 aaKnown RBP10.54□□□□□ -0.72
USP42-207ENST00000521713 IGFL1Q6UW32 110 aa10.53□□□□□ -0.72
USP42-207ENST00000521713 C9orf129Q5T035 196 aaKnown RBP10.53□□□□□ -0.72
USP42-207ENST00000521713 SETXQ7Z333 2677 aaKnown RBP10.53□□□□□ -0.72
USP42-207ENST00000521713 Q8N377 158 aa10.52□□□□□ -0.73
USP42-207ENST00000521713 C8orf17Q9NRJ1 99 aa10.52□□□□□ -0.73
USP42-207ENST00000521713 IGLV8-61A0A075B6I0 122 aa10.49□□□□□ -0.73
USP42-207ENST00000521713 STAB1Q9NY15 2570 aa10.48□□□□□ -0.73
USP42-207ENST00000521713 LINC00304Q8N9R0 145 aa10.46□□□□□ -0.73
USP42-207ENST00000521713 MGAQ8IWI9 3026 aa10.46□□□□□ -0.74
USP42-207ENST00000521713 A0A1B0GVX0 72 aa10.46□□□□□ -0.74
USP42-207ENST00000521713 CASC10Q5T4H9 136 aa10.45□□□□□ -0.74
USP42-207ENST00000521713 Q96NJ1 140 aa10.45□□□□□ -0.74
USP42-207ENST00000521713 UNC79Q9P2D8 2635 aa10.45□□□□□ -0.74
USP42-207ENST00000521713 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
USP42-207ENST00000521713 IGLV7-43P04211 117 aa10.44□□□□□ -0.74
USP42-207ENST00000521713 LAMA2P24043 3122 aaKnown RBP10.44□□□□□ -0.74
USP42-207ENST00000521713 SMR3BP02814 79 aaPredicted RBP10.44□□□□□ -0.74
USP42-207ENST00000521713 LAMA3Q16787 3333 aa10.43□□□□□ -0.74
USP42-207ENST00000521713 COL6A5A8TX70 2615 aa10.42□□□□□ -0.74
USP42-207ENST00000521713 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
USP42-207ENST00000521713 CR1P17927 2039 aa10.42□□□□□ -0.74
USP42-207ENST00000521713 PSORS1C2Q9UIG4 136 aa10.42□□□□□ -0.74
USP42-207ENST00000521713 IGLV5-48A0A075B6I7 105 aa10.41□□□□□ -0.74
USP42-207ENST00000521713 TEX15Q9BXT5 2789 aa10.4□□□□□ -0.75
USP42-207ENST00000521713 A0A1W2PNM2 257 aa10.39□□□□□ -0.75
USP42-207ENST00000521713 CRIPTQ9P021 101 aa10.39□□□□□ -0.75
USP42-207ENST00000521713 Q5XG85 94 aa10.38□□□□□ -0.75
USP42-207ENST00000521713 IGSF10Q6WRI0 2623 aa10.37□□□□□ -0.75
USP42-207ENST00000521713 IGLV5-37A0A075B6J1 123 aa10.36□□□□□ -0.75
USP42-207ENST00000521713 BAHCC1Q9P281 2608 aa10.36□□□□□ -0.75
USP42-207ENST00000521713 TNP2Q05952 138 aa10.35□□□□□ -0.75
USP42-207ENST00000521713 A0A0C4DFX4 3053 aa10.35□□□□□ -0.75
USP42-207ENST00000521713 SPRR4Q96PI1 79 aa10.34□□□□□ -0.75
USP42-207ENST00000521713 Q75L30 129 aa10.33□□□□□ -0.76
USP42-207ENST00000521713 DSPP15924 2871 aaKnown RBP10.33□□□□□ -0.76
USP42-207ENST00000521713 UNC80Q8N2C7 3258 aa10.3□□□□□ -0.76
USP42-207ENST00000521713 AKAP13Q12802 2813 aa10.3□□□□□ -0.76
USP42-207ENST00000521713 RBM12B-AS1Q9P1G2 102 aa10.29□□□□□ -0.76
USP42-207ENST00000521713 ANAPC11Q9NYG5 84 aa10.28□□□□□ -0.76
USP42-207ENST00000521713 CHD6Q8TD26 2715 aa10.27□□□□□ -0.77
USP42-207ENST00000521713 IGLV7-46A0A075B6I9 117 aa10.27□□□□□ -0.77
USP42-207ENST00000521713 DSCR10P59022 87 aa10.26□□□□□ -0.77
USP42-207ENST00000521713 FAM104AQ969W3 186 aa10.26□□□□□ -0.77
USP42-207ENST00000521713 FP248Q71RG6 208 aaPredicted RBP10.25□□□□□ -0.77
USP42-207ENST00000521713 WDFY4Q6ZS81 3184 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 207.5 ms