RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 JOSD1Q15040 202 aaPredicted RBP6.13□□□□□ -1.43
PVT1-209ENST00000520913 HIST2H2BEQ16778 126 aa6.13□□□□□ -1.43
PVT1-209ENST00000520913 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.13□□□□□ -1.43
PVT1-209ENST00000520913 GAGE2AQ6NT46 116 aa6.13□□□□□ -1.43
PVT1-209ENST00000520913 SOSTDC1Q6X4U4 206 aa6.13□□□□□ -1.43
PVT1-209ENST00000520913 HIST1H2BHQ93079 126 aa6.13□□□□□ -1.43
PVT1-209ENST00000520913 HIST1H2BNQ99877 126 aa6.13□□□□□ -1.43
PVT1-209ENST00000520913 HIST1H2BMQ99879 126 aa6.13□□□□□ -1.43
PVT1-209ENST00000520913 CBY1Q9Y3M2 126 aa6.13□□□□□ -1.43
PVT1-209ENST00000520913 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
PVT1-209ENST00000520913 ERC2-IT1O76042 136 aa6.12□□□□□ -1.43
PVT1-209ENST00000520913 SPINK1P00995 79 aa6.12□□□□□ -1.43
PVT1-209ENST00000520913 MOBPQ13875 183 aa6.12□□□□□ -1.43
PVT1-209ENST00000520913 FAT4Q6V0I7 4981 aa6.11□□□□□ -1.43
PVT1-209ENST00000520913 ZNF73O43830 326 aaPredicted RBP6.11□□□□□ -1.43
PVT1-209ENST00000520913 ADAMTSL4-AS1Q5T5F5 129 aa6.11□□□□□ -1.43
PVT1-209ENST00000520913 LINC01545Q5VT33 79 aa6.11□□□□□ -1.43
PVT1-209ENST00000520913 SPANXCQ9NY87 97 aa6.11□□□□□ -1.43
PVT1-209ENST00000520913 EIF4EBP3O60516 100 aaPredicted RBP6.1□□□□□ -1.43
PVT1-209ENST00000520913 TIMM17BO60830 172 aa6.1□□□□□ -1.43
PVT1-209ENST00000520913 RPS29P62273 56 aaKnown RBP6.1□□□□□ -1.43
PVT1-209ENST00000520913 PET117Q6UWS5 81 aa6.1□□□□□ -1.43
PVT1-209ENST00000520913 ZNF815PA8K554 130 aa6.09□□□□□ -1.43
PVT1-209ENST00000520913 HINT1P49773 126 aaPredicted RBP6.09□□□□□ -1.43
PVT1-209ENST00000520913 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
PVT1-209ENST00000520913 LINC00308Q8TCZ7 52 aa6.09□□□□□ -1.43
PVT1-209ENST00000520913 LITAFQ99732 161 aa6.09□□□□□ -1.43
PVT1-209ENST00000520913 C9orf153Q5TBE3 101 aa6.08□□□□□ -1.44
PVT1-209ENST00000520913 C5orf52A6NGY3 159 aa6.07□□□□□ -1.44
PVT1-209ENST00000520913 C3orf79P0CE67 100 aa6.07□□□□□ -1.44
PVT1-209ENST00000520913 OR13C6PQ8NH95 151 aa6.07□□□□□ -1.44
PVT1-209ENST00000520913 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
PVT1-209ENST00000520913 Q8N377 158 aa6.06□□□□□ -1.44
PVT1-209ENST00000520913 SPANXDQ9BXN6 97 aa6.06□□□□□ -1.44
PVT1-209ENST00000520913 TTTY13Q9BZ97 58 aa6.05□□□□□ -1.44
PVT1-209ENST00000520913 DHRS4-AS1Q9P1J3 65 aa6.05□□□□□ -1.44
PVT1-209ENST00000520913 C20orf202A1L168 122 aa6.04□□□□□ -1.44
PVT1-209ENST00000520913 SLC25A20O43772 301 aa6.04□□□□□ -1.44
PVT1-209ENST00000520913 KRTDAPP60985 99 aa6.04□□□□□ -1.44
PVT1-209ENST00000520913 COA6Q5JTJ3 125 aaKnown RBP6.04□□□□□ -1.44
PVT1-209ENST00000520913 LINC00518Q8N0U6 118 aa6.04□□□□□ -1.44
PVT1-209ENST00000520913 ST20-AS1Q8NBB2 130 aa6.04□□□□□ -1.44
PVT1-209ENST00000520913 ELOF1P60002 83 aaKnown RBP6.03□□□□□ -1.44
PVT1-209ENST00000520913 SLC25A34Q6PIV7 304 aa6.03□□□□□ -1.44
PVT1-209ENST00000520913 SCGB1D4Q6XE38 83 aa6.03□□□□□ -1.44
PVT1-209ENST00000520913 COPS9Q8WXC6 57 aa6.03□□□□□ -1.44
PVT1-209ENST00000520913 SPRR1BP22528 89 aa6.02□□□□□ -1.45
PVT1-209ENST00000520913 COX7BP24311 80 aa6.01□□□□□ -1.45
PVT1-209ENST00000520913 AKR1D1P51857 326 aa6.01□□□□□ -1.45
PVT1-209ENST00000520913 C6orf99Q4VX62 202 aa6.01□□□□□ -1.45
PVT1-209ENST00000520913 LCE2AQ5TA79 106 aaPredicted RBP6.01□□□□□ -1.45
PVT1-209ENST00000520913 IFITM1P13164 125 aa6□□□□□ -1.45
PVT1-209ENST00000520913 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
PVT1-209ENST00000520913 ANKRD39Q53RE8 183 aa6□□□□□ -1.45
PVT1-209ENST00000520913 LIMD2Q9BT23 127 aa6□□□□□ -1.45
PVT1-209ENST00000520913 SEC61BP60468 96 aaKnown RBP5.99□□□□□ -1.45
PVT1-209ENST00000520913 Q6ZVH6 145 aa5.99□□□□□ -1.45
PVT1-209ENST00000520913 LAMTOR3Q9UHA4 124 aa5.99□□□□□ -1.45
PVT1-209ENST00000520913 TRBV7-6A0A0J9YX20 115 aa5.98□□□□□ -1.45
PVT1-209ENST00000520913 ATOH7Q8N100 152 aa5.98□□□□□ -1.45
PVT1-209ENST00000520913 A0A1B0GWB2 263 aa5.97□□□□□ -1.45
PVT1-209ENST00000520913 A6NDN8 102 aa5.96□□□□□ -1.46
PVT1-209ENST00000520913 TAL2Q16559 108 aa5.96□□□□□ -1.46
PVT1-209ENST00000520913 TEX49A0A1B0GTD5 131 aa5.95□□□□□ -1.46
PVT1-209ENST00000520913 SNRPEP62304 92 aaKnown RBP5.95□□□□□ -1.46
PVT1-209ENST00000520913 Q1RN00 199 aa5.95□□□□□ -1.46
PVT1-209ENST00000520913 XP32Q5T750 250 aa5.95□□□□□ -1.46
PVT1-209ENST00000520913 HRCT1Q6UXD1 115 aa5.95□□□□□ -1.46
PVT1-209ENST00000520913 PCP2Q8IVA1 136 aa5.95□□□□□ -1.46
PVT1-209ENST00000520913 TRAV13-2A0A0B4J235 113 aa5.94□□□□□ -1.46
PVT1-209ENST00000520913 MUSTN1Q8IVN3 82 aa5.94□□□□□ -1.46
PVT1-209ENST00000520913 DEFB105AQ8NG35 78 aa5.94□□□□□ -1.46
PVT1-209ENST00000520913 PRO1933Q9H354 126 aa5.94□□□□□ -1.46
PVT1-209ENST00000520913 IGLV5-48A0A075B6I7 105 aa5.93□□□□□ -1.46
PVT1-209ENST00000520913 A4D1N5 150 aa5.93□□□□□ -1.46
PVT1-209ENST00000520913 CD164Q04900 197 aa5.93□□□□□ -1.46
PVT1-209ENST00000520913 NHP2Q9NX24 153 aaKnown RBP5.93□□□□□ -1.46
PVT1-209ENST00000520913 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
PVT1-209ENST00000520913 H7C2G1 150 aa5.91□□□□□ -1.46
PVT1-209ENST00000520913 S100A2P29034 98 aa5.91□□□□□ -1.46
PVT1-209ENST00000520913 LINC01547P58512 204 aaPredicted RBP5.91□□□□□ -1.46
PVT1-209ENST00000520913 HIST3H2BBQ8N257 126 aa5.91□□□□□ -1.46
PVT1-209ENST00000520913 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
PVT1-209ENST00000520913 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
PVT1-209ENST00000520913 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
PVT1-209ENST00000520913 HSBP1L1C9JCN9 74 aa5.9□□□□□ -1.46
PVT1-209ENST00000520913 SMIM29Q86T20 159 aa5.9□□□□□ -1.46
PVT1-209ENST00000520913 SMIM11BQ8TCY0 68 aa5.9□□□□□ -1.46
PVT1-209ENST00000520913 HIST1H2BLQ99880 126 aa5.9□□□□□ -1.46
PVT1-209ENST00000520913 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.46
PVT1-209ENST00000520913 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
PVT1-209ENST00000520913 C9orf92A6NGG3 77 aa5.88□□□□□ -1.47
PVT1-209ENST00000520913 Q5XG85 94 aa5.88□□□□□ -1.47
PVT1-209ENST00000520913 S100A6P06703 90 aa5.87□□□□□ -1.47
PVT1-209ENST00000520913 VAMP3Q15836 100 aa5.87□□□□□ -1.47
PVT1-209ENST00000520913 F8WEM9 126 aa5.86□□□□□ -1.47
PVT1-209ENST00000520913 S100A1P23297 94 aa5.84□□□□□ -1.47
PVT1-209ENST00000520913 C1orf195Q5TG92 126 aa5.84□□□□□ -1.47
PVT1-209ENST00000520913 LINC00575Q6W349 94 aa5.84□□□□□ -1.47
PVT1-209ENST00000520913 Q6ZQY7 126 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 355.7 ms