RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 SMIM13P0DJ93 91 aa6.84□□□□□ -1.31
SRGAP3-212ENST00000520860 DDTP30046 118 aa6.84□□□□□ -1.31
SRGAP3-212ENST00000520860 JOSD1Q15040 202 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-212ENST00000520860 MEIG1Q5JSS6 88 aa6.84□□□□□ -1.31
SRGAP3-212ENST00000520860 TMEM170BQ5T4T1 132 aa6.84□□□□□ -1.31
SRGAP3-212ENST00000520860 BAGE3Q86Y29 109 aa6.84□□□□□ -1.31
SRGAP3-212ENST00000520860 MIR7-3HGQ8N6C7 128 aa6.84□□□□□ -1.31
SRGAP3-212ENST00000520860 LINC01546A6NGU7 62 aa6.83□□□□□ -1.32
SRGAP3-212ENST00000520860 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
SRGAP3-212ENST00000520860 C18orf32Q8TCD1 76 aa6.83□□□□□ -1.32
SRGAP3-212ENST00000520860 LINC00846Q9NV44 126 aa6.83□□□□□ -1.32
SRGAP3-212ENST00000520860 TMA7Q9Y2S6 64 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-212ENST00000520860 LCE2BO14633 110 aa6.82□□□□□ -1.32
SRGAP3-212ENST00000520860 SLC25A34Q6PIV7 304 aa6.82□□□□□ -1.32
SRGAP3-212ENST00000520860 ST20-AS1Q8NBB2 130 aa6.82□□□□□ -1.32
SRGAP3-212ENST00000520860 CHCHD1Q96BP2 118 aaKnown RBP6.82□□□□□ -1.32
SRGAP3-212ENST00000520860 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
SRGAP3-212ENST00000520860 S100A2P29034 98 aa6.81□□□□□ -1.32
SRGAP3-212ENST00000520860 COA6Q5JTJ3 125 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-212ENST00000520860 C5orf52A6NGY3 159 aa6.8□□□□□ -1.32
SRGAP3-212ENST00000520860 HSBP1O75506 76 aa6.8□□□□□ -1.32
SRGAP3-212ENST00000520860 LINC00614P0C842 121 aa6.8□□□□□ -1.32
SRGAP3-212ENST00000520860 CD164Q04900 197 aa6.79□□□□□ -1.32
SRGAP3-212ENST00000520860 TRBV10-2A0A0K0K1G8 114 aa6.78□□□□□ -1.32
SRGAP3-212ENST00000520860 H7C2G1 150 aa6.78□□□□□ -1.32
SRGAP3-212ENST00000520860 C1orf195Q5TG92 126 aa6.78□□□□□ -1.32
SRGAP3-212ENST00000520860 LAMTOR3Q9UHA4 124 aa6.78□□□□□ -1.32
SRGAP3-212ENST00000520860 LINC00587B1AMM8 73 aa6.77□□□□□ -1.33
SRGAP3-212ENST00000520860 SERF1AO75920 110 aa6.77□□□□□ -1.33
SRGAP3-212ENST00000520860 MT2AP02795 61 aa6.77□□□□□ -1.33
SRGAP3-212ENST00000520860 HERV-K104P63124 156 aa6.77□□□□□ -1.33
SRGAP3-212ENST00000520860 MAP1LC3CQ9BXW4 147 aa6.77□□□□□ -1.33
SRGAP3-212ENST00000520860 C20orf202A1L168 122 aa6.76□□□□□ -1.33
SRGAP3-212ENST00000520860 SPRR1BP22528 89 aa6.76□□□□□ -1.33
SRGAP3-212ENST00000520860 SNRPEP62304 92 aaKnown RBP6.76□□□□□ -1.33
SRGAP3-212ENST00000520860 S100A7L2Q5SY68 101 aa6.76□□□□□ -1.33
SRGAP3-212ENST00000520860 Q5XG85 94 aa6.76□□□□□ -1.33
SRGAP3-212ENST00000520860 CHTOPQ9Y3Y2 248 aaKnown RBP6.76□□□□□ -1.33
SRGAP3-212ENST00000520860 TRAV23DV6A0A075B6W5 121 aa6.75□□□□□ -1.33
SRGAP3-212ENST00000520860 HBDP02042 147 aa6.75□□□□□ -1.33
SRGAP3-212ENST00000520860 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
SRGAP3-212ENST00000520860 ATP11AUNQ6ZP68 121 aa6.75□□□□□ -1.33
SRGAP3-212ENST00000520860 HSPB8Q9UJY1 196 aa6.75□□□□□ -1.33
SRGAP3-212ENST00000520860 AKR1D1P51857 326 aa6.74□□□□□ -1.33
SRGAP3-212ENST00000520860 PRO1933Q9H354 126 aa6.74□□□□□ -1.33
SRGAP3-212ENST00000520860 SPANXB1Q9NS25 103 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-212ENST00000520860 TMEM223A0PJW6 202 aa6.73□□□□□ -1.33
SRGAP3-212ENST00000520860 ZNF73O43830 326 aaPredicted RBP6.73□□□□□ -1.33
SRGAP3-212ENST00000520860 LEPROTL1O95214 131 aa6.73□□□□□ -1.33
SRGAP3-212ENST00000520860 HIST3H2BBQ8N257 126 aa6.73□□□□□ -1.33
SRGAP3-212ENST00000520860 A0A096LNJ9 63 aa6.72□□□□□ -1.33
SRGAP3-212ENST00000520860 MT1FP04733 61 aa6.72□□□□□ -1.33
SRGAP3-212ENST00000520860 HINT1P49773 126 aaPredicted RBP6.72□□□□□ -1.33
SRGAP3-212ENST00000520860 SMIM29Q86T20 159 aa6.72□□□□□ -1.33
SRGAP3-212ENST00000520860 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
SRGAP3-212ENST00000520860 LOC107984156A0A0G2JMH3 177 aa6.71□□□□□ -1.34
SRGAP3-212ENST00000520860 FABP4P15090 132 aa6.71□□□□□ -1.34
SRGAP3-212ENST00000520860 ARL17AQ8IVW1 177 aa6.71□□□□□ -1.34
SRGAP3-212ENST00000520860 MIEN1Q9BRT3 115 aa6.71□□□□□ -1.34
SRGAP3-212ENST00000520860 MYMXA0A1B0GTQ4 84 aa6.7□□□□□ -1.34
SRGAP3-212ENST00000520860 LINC00310P59036 64 aa6.7□□□□□ -1.34
SRGAP3-212ENST00000520860 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
SRGAP3-212ENST00000520860 Q1RN00 199 aa6.7□□□□□ -1.34
SRGAP3-212ENST00000520860 URB1-AS1Q96HZ7 61 aa6.7□□□□□ -1.34
SRGAP3-212ENST00000520860 HIST1H2BLQ99880 126 aa6.7□□□□□ -1.34
SRGAP3-212ENST00000520860 TRBV20-1A0A075B6N2 111 aa6.68□□□□□ -1.34
SRGAP3-212ENST00000520860 PMCHL1Q16048 86 aa6.68□□□□□ -1.34
SRGAP3-212ENST00000520860 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
SRGAP3-212ENST00000520860 IFI27L1Q96BM0 104 aa6.68□□□□□ -1.34
SRGAP3-212ENST00000520860 DHRS4-AS1Q9P1J3 65 aa6.68□□□□□ -1.34
SRGAP3-212ENST00000520860 NDUFC2O95298 119 aa6.67□□□□□ -1.34
SRGAP3-212ENST00000520860 CBY1Q9Y3M2 126 aa6.67□□□□□ -1.34
SRGAP3-212ENST00000520860 KRTDAPP60985 99 aa6.66□□□□□ -1.34
SRGAP3-212ENST00000520860 TAL2Q16559 108 aa6.66□□□□□ -1.34
SRGAP3-212ENST00000520860 Q75L30 129 aa6.66□□□□□ -1.34
SRGAP3-212ENST00000520860 TCL1BO95988 128 aa6.65□□□□□ -1.34
SRGAP3-212ENST00000520860 PET117Q6UWS5 81 aa6.65□□□□□ -1.34
SRGAP3-212ENST00000520860 TRAV12-1A0A0B4J245 112 aa6.64□□□□□ -1.35
SRGAP3-212ENST00000520860 SYS1-DBNDD2H3BUS1 97 aa6.64□□□□□ -1.35
SRGAP3-212ENST00000520860 DEFB105AQ8NG35 78 aa6.64□□□□□ -1.35
SRGAP3-212ENST00000520860 NEBP20929 6669 aa6.64□□□□□ -1.35
SRGAP3-212ENST00000520860 LOC105371267A0A1B0GV96 52 aa6.63□□□□□ -1.35
SRGAP3-212ENST00000520860 C3orf79P0CE67 100 aa6.63□□□□□ -1.35
SRGAP3-212ENST00000520860 PCP2Q8IVA1 136 aa6.63□□□□□ -1.35
SRGAP3-212ENST00000520860 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
SRGAP3-212ENST00000520860 TEX49A0A1B0GTD5 131 aa6.62□□□□□ -1.35
SRGAP3-212ENST00000520860 H0Y8G0 127 aa6.62□□□□□ -1.35
SRGAP3-212ENST00000520860 SCGB1D1O95968 90 aa6.62□□□□□ -1.35
SRGAP3-212ENST00000520860 SMIM6P0DI80 62 aa6.62□□□□□ -1.35
SRGAP3-212ENST00000520860 PLNP26678 52 aa6.62□□□□□ -1.35
SRGAP3-212ENST00000520860 OBSCN-AS1Q96MR7 158 aa6.62□□□□□ -1.35
SRGAP3-212ENST00000520860 HSBP1L1C9JCN9 74 aa6.6□□□□□ -1.35
SRGAP3-212ENST00000520860 LINC01545Q5VT33 79 aa6.6□□□□□ -1.35
SRGAP3-212ENST00000520860 FAM236DA0A1B0GTK5 79 aa6.59□□□□□ -1.35
SRGAP3-212ENST00000520860 DPM2O94777 84 aa6.59□□□□□ -1.35
SRGAP3-212ENST00000520860 FAM236CP0DP71 79 aa6.59□□□□□ -1.35
SRGAP3-212ENST00000520860 IGKCP01834 107 aa6.58□□□□□ -1.36
SRGAP3-212ENST00000520860 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
SRGAP3-212ENST00000520860 OR13C6PQ8NH95 151 aa6.58□□□□□ -1.36
SRGAP3-212ENST00000520860 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms