RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 CBY1Q9Y3M2 126 aa9.17□□□□□ -0.94
IGHV3-42-201ENST00000520410 ZNF815PA8K554 130 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST1H2BKO60814 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST1H2BJP06899 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST1H2BOP23527 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST1H2BBP33778 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST1H2BDP58876 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST1H2BCP62807 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST2H2BEQ16778 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 SSBP3-AS1Q7Z2R9 100 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST1H2BHQ93079 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST1H2BNQ99877 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 HIST1H2BMQ99879 126 aa9.15□□□□□ -0.94
IGHV3-42-201ENST00000520410 ST20-AS1Q8NBB2 130 aa9.14□□□□□ -0.95
IGHV3-42-201ENST00000520410 SPANXCQ9NY87 97 aa9.14□□□□□ -0.95
IGHV3-42-201ENST00000520410 LINC00308Q8TCZ7 52 aa9.13□□□□□ -0.95
IGHV3-42-201ENST00000520410 KRTDAPP60985 99 aa9.12□□□□□ -0.95
IGHV3-42-201ENST00000520410 PET117Q6UWS5 81 aa9.12□□□□□ -0.95
IGHV3-42-201ENST00000520410 MUC2Q02817 5179 aa9.12□□□□□ -0.95
IGHV3-42-201ENST00000520410 LINC01545Q5VT33 79 aa9.11□□□□□ -0.95
IGHV3-42-201ENST00000520410 TTTY13Q9BZ97 58 aa9.11□□□□□ -0.95
IGHV3-42-201ENST00000520410 SLC25A20O43772 301 aa9.1□□□□□ -0.95
IGHV3-42-201ENST00000520410 KRTAP13-3Q3SY46 172 aa9.1□□□□□ -0.95
IGHV3-42-201ENST00000520410 SCGB1D4Q6XE38 83 aa9.1□□□□□ -0.95
IGHV3-42-201ENST00000520410 TIMM17BO60830 172 aa9.09□□□□□ -0.95
IGHV3-42-201ENST00000520410 HRCT1Q6UXD1 115 aa9.09□□□□□ -0.95
IGHV3-42-201ENST00000520410 Q8N377 158 aa9.09□□□□□ -0.95
IGHV3-42-201ENST00000520410 C3orf79P0CE67 100 aa9.08□□□□□ -0.96
IGHV3-42-201ENST00000520410 LITAFQ99732 161 aa9.08□□□□□ -0.96
IGHV3-42-201ENST00000520410 SPANXDQ9BXN6 97 aa9.08□□□□□ -0.96
IGHV3-42-201ENST00000520410 C20orf202A1L168 122 aa9.07□□□□□ -0.96
IGHV3-42-201ENST00000520410 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
IGHV3-42-201ENST00000520410 SLC25A34Q6PIV7 304 aa9.07□□□□□ -0.96
IGHV3-42-201ENST00000520410 DHRS4-AS1Q9P1J3 65 aa9.07□□□□□ -0.96
IGHV3-42-201ENST00000520410 COX7BP24311 80 aa9.06□□□□□ -0.96
IGHV3-42-201ENST00000520410 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
IGHV3-42-201ENST00000520410 TAL2Q16559 108 aa9.05□□□□□ -0.96
IGHV3-42-201ENST00000520410 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
IGHV3-42-201ENST00000520410 LINC00518Q8N0U6 118 aa9.05□□□□□ -0.96
IGHV3-42-201ENST00000520410 LAMTOR3Q9UHA4 124 aa9.05□□□□□ -0.96
IGHV3-42-201ENST00000520410 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
IGHV3-42-201ENST00000520410 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
IGHV3-42-201ENST00000520410 A6NDN8 102 aa9.02□□□□□ -0.97
IGHV3-42-201ENST00000520410 C5orf52A6NGY3 159 aa9.02□□□□□ -0.97
IGHV3-42-201ENST00000520410 Q1RN00 199 aa9.02□□□□□ -0.97
IGHV3-42-201ENST00000520410 COPS9Q8WXC6 57 aa9.02□□□□□ -0.97
IGHV3-42-201ENST00000520410 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
IGHV3-42-201ENST00000520410 MUC17Q685J3 4493 aa9.01□□□□□ -0.97
IGHV3-42-201ENST00000520410 ELOF1P60002 83 aaKnown RBP9.01□□□□□ -0.97
IGHV3-42-201ENST00000520410 ASB16-AS1Q495Z4 193 aa9.01□□□□□ -0.97
IGHV3-42-201ENST00000520410 ANKRD39Q53RE8 183 aa8.99□□□□□ -0.97
IGHV3-42-201ENST00000520410 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
IGHV3-42-201ENST00000520410 SPRR1BP22528 89 aa8.97□□□□□ -0.97
IGHV3-42-201ENST00000520410 LINC01547P58512 204 aaPredicted RBP8.96□□□□□ -0.98
IGHV3-42-201ENST00000520410 TEX49A0A1B0GTD5 131 aa8.95□□□□□ -0.98
IGHV3-42-201ENST00000520410 C9orf92A6NGG3 77 aa8.95□□□□□ -0.98
IGHV3-42-201ENST00000520410 H7C2G1 150 aa8.95□□□□□ -0.98
IGHV3-42-201ENST00000520410 IFITM1P13164 125 aa8.95□□□□□ -0.98
IGHV3-42-201ENST00000520410 COA6Q5JTJ3 125 aaKnown RBP8.95□□□□□ -0.98
IGHV3-42-201ENST00000520410 MUSTN1Q8IVN3 82 aa8.95□□□□□ -0.98
IGHV3-42-201ENST00000520410 PRO1933Q9H354 126 aa8.95□□□□□ -0.98
IGHV3-42-201ENST00000520410 A0A1B0GWB2 263 aa8.94□□□□□ -0.98
IGHV3-42-201ENST00000520410 XP32Q5T750 250 aa8.94□□□□□ -0.98
IGHV3-42-201ENST00000520410 PCP2Q8IVA1 136 aa8.94□□□□□ -0.98
IGHV3-42-201ENST00000520410 KRTAP9-2Q9BYQ4 174 aa8.94□□□□□ -0.98
IGHV3-42-201ENST00000520410 AKR1D1P51857 326 aa8.93□□□□□ -0.98
IGHV3-42-201ENST00000520410 Q6ZVH6 145 aa8.92□□□□□ -0.98
IGHV3-42-201ENST00000520410 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
IGHV3-42-201ENST00000520410 TRBV7-6A0A0J9YX20 115 aa8.91□□□□□ -0.98
IGHV3-42-201ENST00000520410 TRAV13-2A0A0B4J235 113 aa8.9□□□□□ -0.98
IGHV3-42-201ENST00000520410 S100A2P29034 98 aa8.9□□□□□ -0.98
IGHV3-42-201ENST00000520410 NHP2Q9NX24 153 aaKnown RBP8.9□□□□□ -0.98
IGHV3-42-201ENST00000520410 HSBP1L1C9JCN9 74 aa8.89□□□□□ -0.99
IGHV3-42-201ENST00000520410 KRTAP4-1Q9BYQ7 146 aa8.89□□□□□ -0.99
IGHV3-42-201ENST00000520410 A0A0G2JQZ4 141 aa8.87□□□□□ -0.99
IGHV3-42-201ENST00000520410 A4D1N5 150 aa8.87□□□□□ -0.99
IGHV3-42-201ENST00000520410 SMIM11BQ8TCY0 68 aa8.87□□□□□ -0.99
IGHV3-42-201ENST00000520410 F8WEM9 126 aa8.86□□□□□ -0.99
IGHV3-42-201ENST00000520410 SNRPEP62304 92 aaKnown RBP8.86□□□□□ -0.99
IGHV3-42-201ENST00000520410 CD164Q04900 197 aa8.86□□□□□ -0.99
IGHV3-42-201ENST00000520410 VAMP3Q15836 100 aa8.85□□□□□ -0.99
IGHV3-42-201ENST00000520410 PCOTHQ58A44 107 aa8.84□□□□□ -0.99
IGHV3-42-201ENST00000520410 SMIM29Q86T20 159 aa8.84□□□□□ -0.99
IGHV3-42-201ENST00000520410 IGLV8-61A0A075B6I0 122 aa8.83□□□□□ -1
IGHV3-42-201ENST00000520410 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
IGHV3-42-201ENST00000520410 S100A6P06703 90 aa8.82□□□□□ -1
IGHV3-42-201ENST00000520410 HIST3H2BBQ8N257 126 aa8.81□□□□□ -1
IGHV3-42-201ENST00000520410 HIST1H2BLQ99880 126 aa8.8□□□□□ -1
IGHV3-42-201ENST00000520410 C12orf57Q99622 126 aa8.79□□□□□ -1
IGHV3-42-201ENST00000520410 TCL1BO95988 128 aa8.78□□□□□ -1
IGHV3-42-201ENST00000520410 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
IGHV3-42-201ENST00000520410 C1orf195Q5TG92 126 aa8.78□□□□□ -1
IGHV3-42-201ENST00000520410 hADV29S1A0JD25 119 aa8.77□□□□□ -1.01
IGHV3-42-201ENST00000520410 Q6ZQY7 126 aa8.77□□□□□ -1.01
IGHV3-42-201ENST00000520410 SCGB1D1O95968 90 aa8.76□□□□□ -1.01
IGHV3-42-201ENST00000520410 LINC00575Q6W349 94 aa8.76□□□□□ -1.01
IGHV3-42-201ENST00000520410 HIST1H4GQ99525 98 aa8.76□□□□□ -1.01
IGHV3-42-201ENST00000520410 Q5XG85 94 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms