RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 C4AP0C0L4 1744 aa1.23□□□□□ -2.21
HMGB1P46-201ENST00000520062 A0A096LNT2 108 aa1.23□□□□□ -2.21
HMGB1P46-201ENST00000520062 NDUFA4O00483 81 aa1.23□□□□□ -2.21
HMGB1P46-201ENST00000520062 COX7BP24311 80 aa1.23□□□□□ -2.21
HMGB1P46-201ENST00000520062 SLIT1O75093 1534 aa1.23□□□□□ -2.21
HMGB1P46-201ENST00000520062 LINC00959A0A1B0GUT2 108 aa1.22□□□□□ -2.21
HMGB1P46-201ENST00000520062 MRPL33O75394 65 aaKnown RBP1.22□□□□□ -2.21
HMGB1P46-201ENST00000520062 Q6ZRX8 168 aa1.22□□□□□ -2.21
HMGB1P46-201ENST00000520062 KCNQ1DNQ9H478 68 aa1.22□□□□□ -2.21
HMGB1P46-201ENST00000520062 FAM208BQ5VWN6 2430 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 SAMD9LQ8IVG5 1584 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 CACNA1EQ15878 2313 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 LMO7Q8WWI1 1683 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 LINC01546A6NGU7 62 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 IGIPA6NJ69 53 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 H0YGX0 51 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 LY6G6CO95867 125 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 SPINK9Q5DT21 86 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 DEPDC5O75140 1603 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 PDE4DIPQ5VU43 2346 aa1.21□□□□□ -2.22
HMGB1P46-201ENST00000520062 GVQW2A0A096LPI5 108 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P46-201ENST00000520062 ETDCA0A1B0GVM5 59 aa1.2□□□□□ -2.22
HMGB1P46-201ENST00000520062 CPSF4LA6NMK7 179 aaKnown RBP1.2□□□□□ -2.22
HMGB1P46-201ENST00000520062 I3L3M4 83 aa1.2□□□□□ -2.22
HMGB1P46-201ENST00000520062 FXYD6P3P58550 94 aa1.2□□□□□ -2.22
HMGB1P46-201ENST00000520062 HAMPP81172 84 aa1.2□□□□□ -2.22
HMGB1P46-201ENST00000520062 C4BP0C0L5 1744 aa1.2□□□□□ -2.22
HMGB1P46-201ENST00000520062 M0R1W7 72 aa1.19□□□□□ -2.22
HMGB1P46-201ENST00000520062 COX6B1P14854 86 aa1.19□□□□□ -2.22
HMGB1P46-201ENST00000520062 SNRPGP62308 76 aaKnown RBP1.19□□□□□ -2.22
HMGB1P46-201ENST00000520062 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.19□□□□□ -2.22
HMGB1P46-201ENST00000520062 MROH2BQ7Z745 1585 aa1.19□□□□□ -2.22
HMGB1P46-201ENST00000520062 GCC2Q8IWJ2 1684 aa1.19□□□□□ -2.22
HMGB1P46-201ENST00000520062 SSC5DA1L4H1 1573 aa1.18□□□□□ -2.22
HMGB1P46-201ENST00000520062 JMJD1CQ15652 2540 aa1.18□□□□□ -2.22
HMGB1P46-201ENST00000520062 PIEZO2Q9H5I5 2752 aa1.18□□□□□ -2.22
HMGB1P46-201ENST00000520062 DEFB131BA0A096LNP1 70 aa1.18□□□□□ -2.22
HMGB1P46-201ENST00000520062 G3V318 75 aa1.18□□□□□ -2.22
HMGB1P46-201ENST00000520062 SSBP3-AS1Q7Z2R9 100 aa1.18□□□□□ -2.22
HMGB1P46-201ENST00000520062 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P46-201ENST00000520062 KIF21BO75037 1637 aa1.18□□□□□ -2.22
HMGB1P46-201ENST00000520062 PTPRZ1P23471 2315 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P46-201ENST00000520062 SPTY2D1-AS1A0A0U1RR47 76 aa1.17□□□□□ -2.22
HMGB1P46-201ENST00000520062 PKDREJQ9NTG1 2253 aa1.16□□□□□ -2.22
HMGB1P46-201ENST00000520062 RPL37P61927 97 aaKnown RBP1.16□□□□□ -2.22
HMGB1P46-201ENST00000520062 DUOX1Q9NRD9 1551 aa1.16□□□□□ -2.22
HMGB1P46-201ENST00000520062 TNRC6CQ9HCJ0 1690 aaKnown RBP1.16□□□□□ -2.22
HMGB1P46-201ENST00000520062 CLTCL1P53675 1640 aa1.15□□□□□ -2.22
HMGB1P46-201ENST00000520062 KNL1Q8NG31 2342 aa1.15□□□□□ -2.23
HMGB1P46-201ENST00000520062 UBE2DNLQ8IWF7 75 aa1.15□□□□□ -2.23
HMGB1P46-201ENST00000520062 USMG5Q96IX5 58 aa1.15□□□□□ -2.23
HMGB1P46-201ENST00000520062 CRIPTQ9P021 101 aa1.15□□□□□ -2.23
HMGB1P46-201ENST00000520062 PTPRQQ9UMZ3 2332 aa1.15□□□□□ -2.23
HMGB1P46-201ENST00000520062 COX6B2Q6YFQ2 88 aa1.14□□□□□ -2.23
HMGB1P46-201ENST00000520062 TMEM167BQ9NRX6 74 aa1.14□□□□□ -2.23
HMGB1P46-201ENST00000520062 ASH1LQ9NR48 2969 aaKnown RBP1.12□□□□□ -2.23
HMGB1P46-201ENST00000520062 C2CD3Q4AC94 2353 aa1.12□□□□□ -2.23
HMGB1P46-201ENST00000520062 WNK2Q9Y3S1 2297 aa1.12□□□□□ -2.23
HMGB1P46-201ENST00000520062 A0A0D9SG42 100 aa1.12□□□□□ -2.23
HMGB1P46-201ENST00000520062 SPINK4O60575 86 aa1.12□□□□□ -2.23
HMGB1P46-201ENST00000520062 NDUFA3O95167 84 aa1.12□□□□□ -2.23
HMGB1P46-201ENST00000520062 USF3Q68DE3 2245 aa1.11□□□□□ -2.23
HMGB1P46-201ENST00000520062 K7EQZ3 153 aa1.11□□□□□ -2.23
HMGB1P46-201ENST00000520062 CCL22O00626 93 aa1.11□□□□□ -2.23
HMGB1P46-201ENST00000520062 CRIP1P50238 77 aa1.11□□□□□ -2.23
HMGB1P46-201ENST00000520062 LINC00158P58513 81 aa1.11□□□□□ -2.23
HMGB1P46-201ENST00000520062 PIGYQ3MUY2 71 aa1.11□□□□□ -2.23
HMGB1P46-201ENST00000520062 TIMM8BQ9Y5J9 83 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P46-201ENST00000520062 TPRP12270 2363 aaKnown RBP1.11□□□□□ -2.23
HMGB1P46-201ENST00000520062 LYNX1G3V0Z9 82 aa1.1□□□□□ -2.23
HMGB1P46-201ENST00000520062 Q8IZM0 81 aa1.1□□□□□ -2.23
HMGB1P46-201ENST00000520062 DEFB123Q8N688 67 aa1.1□□□□□ -2.23
HMGB1P46-201ENST00000520062 CNFNQ9BYD5 112 aa1.09□□□□□ -2.23
HMGB1P46-201ENST00000520062 C10orf95Q9H7T3 257 aa1.09□□□□□ -2.23
HMGB1P46-201ENST00000520062 TP53AIP1Q9HCN2 124 aa1.09□□□□□ -2.23
HMGB1P46-201ENST00000520062 CDKN2A-AS1Q9UH64 79 aa1.09□□□□□ -2.23
HMGB1P46-201ENST00000520062 ZNF462Q96JM2 2506 aa1.09□□□□□ -2.24
HMGB1P46-201ENST00000520062 MRPL34Q9BQ48 92 aaKnown RBP1.08□□□□□ -2.24
HMGB1P46-201ENST00000520062 SMIM2Q9BVW6 85 aa1.08□□□□□ -2.24
HMGB1P46-201ENST00000520062 SPTBN2O15020 2390 aa1.08□□□□□ -2.24
HMGB1P46-201ENST00000520062 SPTBN1Q01082 2364 aaKnown RBP1.06□□□□□ -2.24
HMGB1P46-201ENST00000520062 I3L2K1 104 aa1.06□□□□□ -2.24
HMGB1P46-201ENST00000520062 LINC00308Q8TCZ7 52 aa1.06□□□□□ -2.24
HMGB1P46-201ENST00000520062 PRO3102Q9H379 93 aa1.06□□□□□ -2.24
HMGB1P46-201ENST00000520062 IGF2RP11717 2491 aa1.06□□□□□ -2.24
HMGB1P46-201ENST00000520062 ZNF292O60281 2723 aa1.05□□□□□ -2.24
HMGB1P46-201ENST00000520062 CSPG4Q6UVK1 2322 aa1.05□□□□□ -2.24
HMGB1P46-201ENST00000520062 ABCA12Q86UK0 2595 aa1.04□□□□□ -2.24
HMGB1P46-201ENST00000520062 NDUFA1O15239 70 aa1.04□□□□□ -2.24
HMGB1P46-201ENST00000520062 COX6A2Q02221 97 aa1.04□□□□□ -2.24
HMGB1P46-201ENST00000520062 MINOS1Q5TGZ0 78 aa1.04□□□□□ -2.24
HMGB1P46-201ENST00000520062 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
HMGB1P46-201ENST00000520062 F8P00451 2351 aa1.03□□□□□ -2.24
HMGB1P46-201ENST00000520062 C6orf48Q9UBA6 75 aa1.03□□□□□ -2.24
HMGB1P46-201ENST00000520062 CACNA1HO95180 2353 aa1.03□□□□□ -2.25
HMGB1P46-201ENST00000520062 GVINP1Q7Z2Y8 2422 aa1.03□□□□□ -2.25
HMGB1P46-201ENST00000520062 DSPP15924 2871 aaKnown RBP1.02□□□□□ -2.25
HMGB1P46-201ENST00000520062 FBN2P35556 2912 aa1.02□□□□□ -2.25
HMGB1P46-201ENST00000520062 A0A0C4DFX4 3053 aa1.02□□□□□ -2.25
HMGB1P46-201ENST00000520062 REV3LO60673 3130 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 396.6 ms