RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 IGLC3P0DOY3 106 aa4.2□□□□□ -1.74
CDKL3-203ENST00000519312 PFN2P35080 140 aa4.2□□□□□ -1.74
CDKL3-203ENST00000519312 SSBP3-AS1Q7Z2R9 100 aa4.2□□□□□ -1.74
CDKL3-203ENST00000519312 NDUFA6P56556 154 aa4.19□□□□□ -1.74
CDKL3-203ENST00000519312 YPEL4Q96NS1 127 aa4.19□□□□□ -1.74
CDKL3-203ENST00000519312 ZNF22P17026 224 aaPredicted RBP4.18□□□□□ -1.74
CDKL3-203ENST00000519312 PMCHL1Q16048 86 aa4.18□□□□□ -1.74
CDKL3-203ENST00000519312 BAGE3Q86Y29 109 aa4.18□□□□□ -1.74
CDKL3-203ENST00000519312 CHCHD1Q96BP2 118 aaKnown RBP4.18□□□□□ -1.74
CDKL3-203ENST00000519312 ZNF625Q96I27 306 aaPredicted RBP4.18□□□□□ -1.74
CDKL3-203ENST00000519312 KCNQ1DNQ9H478 68 aa4.18□□□□□ -1.74
CDKL3-203ENST00000519312 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
CDKL3-203ENST00000519312 SMCR5Q8TEV8 140 aa4.17□□□□□ -1.74
CDKL3-203ENST00000519312 TRAV12-1A0A0B4J245 112 aa4.16□□□□□ -1.74
CDKL3-203ENST00000519312 C11orf86A6NJI1 115 aa4.16□□□□□ -1.74
CDKL3-203ENST00000519312 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
CDKL3-203ENST00000519312 MOBPQ13875 183 aa4.16□□□□□ -1.74
CDKL3-203ENST00000519312 TMEM170BQ5T4T1 132 aa4.16□□□□□ -1.74
CDKL3-203ENST00000519312 CHTOPQ9Y3Y2 248 aaKnown RBP4.16□□□□□ -1.74
CDKL3-203ENST00000519312 HSBP1O75506 76 aa4.15□□□□□ -1.75
CDKL3-203ENST00000519312 IFI27L1Q96BM0 104 aa4.15□□□□□ -1.75
CDKL3-203ENST00000519312 ETDCA0A1B0GVM5 59 aa4.14□□□□□ -1.75
CDKL3-203ENST00000519312 TRGC2P03986 189 aa4.14□□□□□ -1.75
CDKL3-203ENST00000519312 IGLV8-61A0A075B6I0 122 aa4.13□□□□□ -1.75
CDKL3-203ENST00000519312 IGLV9-49A0A0B4J1Y8 123 aa4.13□□□□□ -1.75
CDKL3-203ENST00000519312 TMEM223A0PJW6 202 aa4.13□□□□□ -1.75
CDKL3-203ENST00000519312 PCOTHQ58A44 107 aa4.13□□□□□ -1.75
CDKL3-203ENST00000519312 GAGE2AQ6NT46 116 aa4.13□□□□□ -1.75
CDKL3-203ENST00000519312 ERC2-IT1O76042 136 aa4.12□□□□□ -1.75
CDKL3-203ENST00000519312 LEPROTL1O95214 131 aa4.12□□□□□ -1.75
CDKL3-203ENST00000519312 LINC00158P58513 81 aa4.12□□□□□ -1.75
CDKL3-203ENST00000519312 SMIM29Q86T20 159 aa4.12□□□□□ -1.75
CDKL3-203ENST00000519312 SLC7A5P1Q8MH63 180 aa4.12□□□□□ -1.75
CDKL3-203ENST00000519312 TRBV10-3A0A0K0K1G6 114 aa4.11□□□□□ -1.75
CDKL3-203ENST00000519312 C5orf52A6NGY3 159 aa4.11□□□□□ -1.75
CDKL3-203ENST00000519312 LINC00587B1AMM8 73 aa4.11□□□□□ -1.75
CDKL3-203ENST00000519312 S100A12P80511 92 aa4.11□□□□□ -1.75
CDKL3-203ENST00000519312 Q6ZRX8 168 aa4.11□□□□□ -1.75
CDKL3-203ENST00000519312 BOD1L2Q8IYS8 172 aa4.11□□□□□ -1.75
CDKL3-203ENST00000519312 Q9BRP9 147 aa4.11□□□□□ -1.75
CDKL3-203ENST00000519312 LOC107984156A0A0G2JMH3 177 aa4.1□□□□□ -1.75
CDKL3-203ENST00000519312 TRBV10-2A0A0K0K1G8 114 aa4.1□□□□□ -1.75
CDKL3-203ENST00000519312 COLCA2A8K830 154 aa4.1□□□□□ -1.75
CDKL3-203ENST00000519312 NCR3O14931 201 aa4.1□□□□□ -1.75
CDKL3-203ENST00000519312 SERF1AO75920 110 aa4.1□□□□□ -1.75
CDKL3-203ENST00000519312 HERV-K104P63124 156 aa4.1□□□□□ -1.75
CDKL3-203ENST00000519312 ARL17AQ8IVW1 177 aa4.1□□□□□ -1.75
CDKL3-203ENST00000519312 LIMD2Q9BT23 127 aa4.1□□□□□ -1.75
CDKL3-203ENST00000519312 HSPB8Q9UJY1 196 aa4.1□□□□□ -1.75
CDKL3-203ENST00000519312 MYMXA0A1B0GTQ4 84 aa4.09□□□□□ -1.75
CDKL3-203ENST00000519312 H0Y8G0 127 aa4.09□□□□□ -1.75
CDKL3-203ENST00000519312 ATP6V1G1O75348 118 aa4.09□□□□□ -1.75
CDKL3-203ENST00000519312 SMIM13P0DJ93 91 aa4.09□□□□□ -1.75
CDKL3-203ENST00000519312 PLNP26678 52 aa4.09□□□□□ -1.75
CDKL3-203ENST00000519312 MEIG1Q5JSS6 88 aa4.09□□□□□ -1.75
CDKL3-203ENST00000519312 MIR7-3HGQ8N6C7 128 aa4.09□□□□□ -1.75
CDKL3-203ENST00000519312 PAM16Q9Y3D7 125 aa4.09□□□□□ -1.75
CDKL3-203ENST00000519312 A0A0U1RRA0 63 aa4.08□□□□□ -1.76
CDKL3-203ENST00000519312 M0R2T5 61 aa4.08□□□□□ -1.76
CDKL3-203ENST00000519312 FABP4P15090 132 aa4.08□□□□□ -1.76
CDKL3-203ENST00000519312 MAP1LC3CQ9BXW4 147 aa4.08□□□□□ -1.76
CDKL3-203ENST00000519312 USH2AO75445 5202 aa4.08□□□□□ -1.76
CDKL3-203ENST00000519312 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
CDKL3-203ENST00000519312 LEPROTO15243 131 aa4.07□□□□□ -1.76
CDKL3-203ENST00000519312 DPM2O94777 84 aa4.07□□□□□ -1.76
CDKL3-203ENST00000519312 IGKCP01834 107 aa4.07□□□□□ -1.76
CDKL3-203ENST00000519312 SPRR1BP22528 89 aa4.07□□□□□ -1.76
CDKL3-203ENST00000519312 DDTP30046 118 aa4.07□□□□□ -1.76
CDKL3-203ENST00000519312 HERVK_113P61574 105 aa4.07□□□□□ -1.76
CDKL3-203ENST00000519312 JOSD1Q15040 202 aaPredicted RBP4.07□□□□□ -1.76
CDKL3-203ENST00000519312 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
CDKL3-203ENST00000519312 C9orf153Q5TBE3 101 aa4.07□□□□□ -1.76
CDKL3-203ENST00000519312 J3QQQ9 107 aa4.06□□□□□ -1.76
CDKL3-203ENST00000519312 IGLV6-57P01721 117 aa4.06□□□□□ -1.76
CDKL3-203ENST00000519312 NMUP48645 174 aa4.06□□□□□ -1.76
CDKL3-203ENST00000519312 RPL37P61927 97 aaKnown RBP4.06□□□□□ -1.76
CDKL3-203ENST00000519312 Q5XG85 94 aa4.06□□□□□ -1.76
CDKL3-203ENST00000519312 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
CDKL3-203ENST00000519312 SPANXB1Q9NS25 103 aaPredicted RBP4.06□□□□□ -1.76
CDKL3-203ENST00000519312 NDUFC2O95298 119 aa4.05□□□□□ -1.76
CDKL3-203ENST00000519312 TSPEAR-AS2P59090 65 aa4.05□□□□□ -1.76
CDKL3-203ENST00000519312 CD164Q04900 197 aa4.05□□□□□ -1.76
CDKL3-203ENST00000519312 PMCHL2Q9BQD1 86 aa4.05□□□□□ -1.76
CDKL3-203ENST00000519312 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST1H2BKO60814 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST1H2BJP06899 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 LGALS3P17931 250 aaKnown RBP4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST1H2BOP23527 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST1H2BBP33778 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST1H2BDP58876 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST1H2BCP62807 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST2H2BEQ16778 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.04□□□□□ -1.76
CDKL3-203ENST00000519312 SLC25A34Q6PIV7 304 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 COX6B2Q6YFQ2 88 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST1H2BHQ93079 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST1H2BNQ99877 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 HIST1H2BMQ99879 126 aa4.04□□□□□ -1.76
CDKL3-203ENST00000519312 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms