RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 M0R378 163 aa4.83□□□□□ -1.64
SDCBP-206ENST00000519115 IGKV2D-28P01615 120 aa4.83□□□□□ -1.64
SDCBP-206ENST00000519115 IGLV6-57P01721 117 aa4.83□□□□□ -1.64
SDCBP-206ENST00000519115 SDIM1Q6ZPB5 146 aa4.83□□□□□ -1.64
SDCBP-206ENST00000519115 GTF2H5Q6ZYL4 71 aa4.83□□□□□ -1.64
SDCBP-206ENST00000519115 CIRBP-AS1Q8TBR5 109 aa4.83□□□□□ -1.64
SDCBP-206ENST00000519115 IGKV2-24A0A0C4DH68 120 aa4.82□□□□□ -1.64
SDCBP-206ENST00000519115 A0A1B0GX51 115 aa4.82□□□□□ -1.64
SDCBP-206ENST00000519115 SNCGO76070 127 aa4.82□□□□□ -1.64
SDCBP-206ENST00000519115 TSPAN13O95857 204 aa4.82□□□□□ -1.64
SDCBP-206ENST00000519115 VPREB1P12018 145 aa4.82□□□□□ -1.64
SDCBP-206ENST00000519115 VAMP3Q15836 100 aa4.82□□□□□ -1.64
SDCBP-206ENST00000519115 LINC00337Q8N6G1 96 aa4.82□□□□□ -1.64
SDCBP-206ENST00000519115 FLG2Q5D862 2391 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-206ENST00000519115 H3BUT2 72 aa4.81□□□□□ -1.64
SDCBP-206ENST00000519115 A0A096LNI7 61 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 GAGE10A6NGK3 116 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 H3BQ85 93 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 RPL13AP40429 203 aaKnown RBP4.8□□□□□ -1.64
SDCBP-206ENST00000519115 NPC2P61916 151 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 UBE2V1Q13404 147 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 S100A7L2Q5SY68 101 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 C9orf129Q5T035 196 aaKnown RBP4.8□□□□□ -1.64
SDCBP-206ENST00000519115 SPACA4Q8TDM5 124 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 DPH3Q96FX2 82 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 LINC01600Q96MT4 127 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 KCNQ1DNQ9H478 68 aa4.8□□□□□ -1.64
SDCBP-206ENST00000519115 A0A087WYN8 130 aa4.79□□□□□ -1.64
SDCBP-206ENST00000519115 K7ERJ3 54 aa4.79□□□□□ -1.64
SDCBP-206ENST00000519115 M0QXV9 152 aa4.79□□□□□ -1.64
SDCBP-206ENST00000519115 INAFM2P0DMQ5 153 aa4.79□□□□□ -1.64
SDCBP-206ENST00000519115 SCGB1C2P0DMR2 95 aa4.79□□□□□ -1.64
SDCBP-206ENST00000519115 RPL18AQ02543 176 aaKnown RBP4.79□□□□□ -1.64
SDCBP-206ENST00000519115 GAGE2EQ4V326 116 aa4.79□□□□□ -1.64
SDCBP-206ENST00000519115 XAGE1AQ9HD64 81 aa4.79□□□□□ -1.64
SDCBP-206ENST00000519115 GAGE2DQ9UEU5 116 aa4.79□□□□□ -1.64
SDCBP-206ENST00000519115 DNAH8Q96JB1 4490 aa4.79□□□□□ -1.64
SDCBP-206ENST00000519115 SRRM2Q9UQ35 2752 aaKnown RBP4.78□□□□□ -1.64
SDCBP-206ENST00000519115 F8W1H4 67 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 K7EP34 96 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 TRACP01848 142 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 PSMB2P49721 201 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 GAGE2BQ13066 116 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 ATXN8Q156A1 80 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 Q1RN00 199 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 NKAPP1Q8N9T2 125 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 OR13C6PQ8NH95 151 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 SMIM11BQ8TCY0 68 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 FAT1Q14517 4588 aa4.78□□□□□ -1.64
SDCBP-206ENST00000519115 A0A1B0GV90 55 aa4.77□□□□□ -1.65
SDCBP-206ENST00000519115 TRIAP1O43715 76 aa4.77□□□□□ -1.65
SDCBP-206ENST00000519115 PLA2G1BP04054 148 aaKnown RBP4.77□□□□□ -1.65
SDCBP-206ENST00000519115 C22orf24Q9Y442 160 aa4.77□□□□□ -1.65
SDCBP-206ENST00000519115 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
SDCBP-206ENST00000519115 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
SDCBP-206ENST00000519115 LST1O00453 97 aa4.76□□□□□ -1.65
SDCBP-206ENST00000519115 PRYO14603 147 aa4.76□□□□□ -1.65
SDCBP-206ENST00000519115 SPRR1AP35321 89 aa4.76□□□□□ -1.65
SDCBP-206ENST00000519115 RPL37AP61513 92 aaKnown RBP4.76□□□□□ -1.65
SDCBP-206ENST00000519115 MRPL55Q7Z7F7 128 aaKnown RBP4.76□□□□□ -1.65
SDCBP-206ENST00000519115 Q8NDZ9 215 aa4.76□□□□□ -1.65
SDCBP-206ENST00000519115 PLAC8Q9NZF1 115 aa4.76□□□□□ -1.65
SDCBP-206ENST00000519115 TRAV23DV6A0A075B6W5 121 aa4.75□□□□□ -1.65
SDCBP-206ENST00000519115 TRBV10-3A0A0K0K1G6 114 aa4.75□□□□□ -1.65
SDCBP-206ENST00000519115 H0Y9J4 135 aa4.75□□□□□ -1.65
SDCBP-206ENST00000519115 ZNF73O43830 326 aaPredicted RBP4.75□□□□□ -1.65
SDCBP-206ENST00000519115 KRTAP10-4P60372 401 aaPredicted RBP4.75□□□□□ -1.65
SDCBP-206ENST00000519115 PRR3P79522 188 aaKnown RBP4.75□□□□□ -1.65
SDCBP-206ENST00000519115 OCIAD2Q56VL3 154 aa4.75□□□□□ -1.65
SDCBP-206ENST00000519115 H7C2G1 150 aa4.74□□□□□ -1.65
SDCBP-206ENST00000519115 TCL1BO95988 128 aa4.74□□□□□ -1.65
SDCBP-206ENST00000519115 SERTAD4-AS1Q5TG53 156 aa4.74□□□□□ -1.65
SDCBP-206ENST00000519115 KRTAP7-1Q8IUC3 87 aa4.74□□□□□ -1.65
SDCBP-206ENST00000519115 C7orf33Q8WU49 177 aa4.74□□□□□ -1.65
SDCBP-206ENST00000519115 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
SDCBP-206ENST00000519115 LINC00167Q96N53 147 aa4.74□□□□□ -1.65
SDCBP-206ENST00000519115 VPS13BQ7Z7G8 4022 aa4.74□□□□□ -1.65
SDCBP-206ENST00000519115 KRTAP4-16G5E9R7 235 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-206ENST00000519115 NCR3O14931 201 aa4.73□□□□□ -1.65
SDCBP-206ENST00000519115 SLC25A20O43772 301 aa4.73□□□□□ -1.65
SDCBP-206ENST00000519115 ELOF1P60002 83 aaKnown RBP4.73□□□□□ -1.65
SDCBP-206ENST00000519115 C6orf99Q4VX62 202 aa4.73□□□□□ -1.65
SDCBP-206ENST00000519115 LINC00575Q6W349 94 aa4.73□□□□□ -1.65
SDCBP-206ENST00000519115 PPDPFLQ8WWR9 84 aa4.73□□□□□ -1.65
SDCBP-206ENST00000519115 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
SDCBP-206ENST00000519115 DHRS4-AS1Q9P1J3 65 aa4.73□□□□□ -1.65
SDCBP-206ENST00000519115 A0A1W2PNN7 141 aa4.72□□□□□ -1.65
SDCBP-206ENST00000519115 FAM168BA1KXE4 195 aa4.72□□□□□ -1.65
SDCBP-206ENST00000519115 H3BMG7 143 aa4.72□□□□□ -1.65
SDCBP-206ENST00000519115 H3BT86 120 aa4.72□□□□□ -1.65
SDCBP-206ENST00000519115 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-206ENST00000519115 COX7BP24311 80 aa4.71□□□□□ -1.66
SDCBP-206ENST00000519115 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
SDCBP-206ENST00000519115 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-206ENST00000519115 FAM19A5Q7Z5A7 132 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-206ENST00000519115 hADV29S1A0JD25 119 aa4.7□□□□□ -1.66
SDCBP-206ENST00000519115 TMEM256-PLSCR3K7ERE1 68 aa4.7□□□□□ -1.66
SDCBP-206ENST00000519115 DNAL4O96015 105 aa4.7□□□□□ -1.66
SDCBP-206ENST00000519115 REG3GQ6UW15 175 aa4.7□□□□□ -1.66
SDCBP-206ENST00000519115 Q6ZRX8 168 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms