RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 PRR34Q9NV39 138 aa8.76□□□□□ -1.01
PABPC1-208ENST00000519004 TLN2Q9Y4G6 2542 aa8.76□□□□□ -1.01
PABPC1-208ENST00000519004 WFDC13Q8IUB5 93 aa8.76□□□□□ -1.01
PABPC1-208ENST00000519004 MXRA5Q9NR99 2828 aa8.75□□□□□ -1.01
PABPC1-208ENST00000519004 MAPK1IP1LQ8NDC0 245 aa8.74□□□□□ -1.01
PABPC1-208ENST00000519004 EGFEM1PQ0D2K5 195 aa8.74□□□□□ -1.01
PABPC1-208ENST00000519004 IGKV2D-24A0A075B6R9 120 aa8.73□□□□□ -1.01
PABPC1-208ENST00000519004 COA5Q86WW8 74 aa8.73□□□□□ -1.01
PABPC1-208ENST00000519004 CAMK2N2Q96S95 79 aa8.73□□□□□ -1.01
PABPC1-208ENST00000519004 H0Y9P7 68 aa8.73□□□□□ -1.01
PABPC1-208ENST00000519004 C9orf163Q8N9P6 203 aa8.73□□□□□ -1.01
PABPC1-208ENST00000519004 APCP25054 2843 aa8.73□□□□□ -1.01
PABPC1-208ENST00000519004 CEP295Q9C0D2 2601 aa8.72□□□□□ -1.01
PABPC1-208ENST00000519004 C7orf33Q8WU49 177 aa8.72□□□□□ -1.01
PABPC1-208ENST00000519004 H3BPC8 53 aa8.71□□□□□ -1.01
PABPC1-208ENST00000519004 RIF1Q5UIP0 2472 aaKnown RBP8.71□□□□□ -1.02
PABPC1-208ENST00000519004 X6R8D5 127 aa8.71□□□□□ -1.02
PABPC1-208ENST00000519004 ZANQ9Y493 2812 aa8.7□□□□□ -1.02
PABPC1-208ENST00000519004 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-208ENST00000519004 WFDC10BQ8IUB3 73 aa8.7□□□□□ -1.02
PABPC1-208ENST00000519004 PLAC8Q9NZF1 115 aa8.7□□□□□ -1.02
PABPC1-208ENST00000519004 DNAJC9-AS1A6NH13 148 aa8.7□□□□□ -1.02
PABPC1-208ENST00000519004 NIPBLQ6KC79 2804 aaeCLIP8.69□□□□□ -1.021e-8■□□□□ 9.7
PABPC1-208ENST00000519004 DHRS4-AS1Q9P1J3 65 aa8.69□□□□□ -1.02
PABPC1-208ENST00000519004 IGLV1-51P01701 117 aa8.69□□□□□ -1.02
PABPC1-208ENST00000519004 FN1P02751 2386 aaKnown RBP8.69□□□□□ -1.02
PABPC1-208ENST00000519004 LELP1Q5T871 98 aa8.68□□□□□ -1.02
PABPC1-208ENST00000519004 LINC01558Q9Y6Z2 57 aa8.68□□□□□ -1.02
PABPC1-208ENST00000519004 Q6ZRX8 168 aa8.68□□□□□ -1.02
PABPC1-208ENST00000519004 MYO9AB2RTY4 2548 aa8.67□□□□□ -1.02
PABPC1-208ENST00000519004 NCOR2Q9Y618 2525 aa8.66□□□□□ -1.02
PABPC1-208ENST00000519004 PTPN13Q12923 2485 aa8.66□□□□□ -1.02
PABPC1-208ENST00000519004 FBN2P35556 2912 aa8.66□□□□□ -1.02
PABPC1-208ENST00000519004 ZFHX2Q9C0A1 2572 aaPredicted RBP8.66□□□□□ -1.02
PABPC1-208ENST00000519004 KRTAP4-16G5E9R7 235 aaPredicted RBP8.65□□□□□ -1.02
PABPC1-208ENST00000519004 SPINK7P58062 85 aa8.65□□□□□ -1.02
PABPC1-208ENST00000519004 SERTAD4-AS1Q5TG53 156 aa8.65□□□□□ -1.02
PABPC1-208ENST00000519004 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
PABPC1-208ENST00000519004 H3BS24 57 aa8.65□□□□□ -1.02
PABPC1-208ENST00000519004 IGLV7-46A0A075B6I9 117 aa8.64□□□□□ -1.03
PABPC1-208ENST00000519004 A0A0G2JQZ4 141 aa8.63□□□□□ -1.03
PABPC1-208ENST00000519004 A0A1W2PNN7 141 aa8.63□□□□□ -1.03
PABPC1-208ENST00000519004 C15orf56Q8N910 161 aa8.63□□□□□ -1.03
PABPC1-208ENST00000519004 NBEAL2Q6ZNJ1 2754 aa8.63□□□□□ -1.03
PABPC1-208ENST00000519004 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
PABPC1-208ENST00000519004 KRTAP26-1Q6PEX3 210 aa8.63□□□□□ -1.03
PABPC1-208ENST00000519004 LINC00476Q8WZB0 136 aa8.63□□□□□ -1.03
PABPC1-208ENST00000519004 DEFB4AO15263 64 aa8.62□□□□□ -1.03
PABPC1-208ENST00000519004 LINC00313P59037 77 aa8.62□□□□□ -1.03
PABPC1-208ENST00000519004 SPAG11AQ6PDA7 123 aa8.62□□□□□ -1.03
PABPC1-208ENST00000519004 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
PABPC1-208ENST00000519004 UTP20O75691 2785 aaKnown RBP8.61□□□□□ -1.03
PABPC1-208ENST00000519004 CASC2Q6XLA1 102 aa8.61□□□□□ -1.03
PABPC1-208ENST00000519004 TTC28Q96AY4 2481 aa8.6□□□□□ -1.03
PABPC1-208ENST00000519004 SPRR1AP35321 89 aa8.6□□□□□ -1.03
PABPC1-208ENST00000519004 RPL37AP8A6NKH3 93 aa8.59□□□□□ -1.03
PABPC1-208ENST00000519004 ZFYVE26Q68DK2 2539 aa8.59□□□□□ -1.03
PABPC1-208ENST00000519004 CNBPP62633 177 aaKnown RBP8.59□□□□□ -1.03
PABPC1-208ENST00000519004 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
PABPC1-208ENST00000519004 USP9YO00507 2555 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-208ENST00000519004 TEX15Q9BXT5 2789 aa8.57□□□□□ -1.04
PABPC1-208ENST00000519004 A0A087WSZ3 146 aa8.56□□□□□ -1.04
PABPC1-208ENST00000519004 IGF2RP11717 2491 aa8.56□□□□□ -1.04
PABPC1-208ENST00000519004 GCN1Q92616 2671 aaKnown RBP8.56□□□□□ -1.04
PABPC1-208ENST00000519004 IGLV1-50A0A075B6I6 118 aa8.55□□□□□ -1.04
PABPC1-208ENST00000519004 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
PABPC1-208ENST00000519004 NF1P21359 2839 aa8.55□□□□□ -1.04
PABPC1-208ENST00000519004 HTN3P15516 51 aa8.54□□□□□ -1.04
PABPC1-208ENST00000519004 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
PABPC1-208ENST00000519004 USP9XQ93008 2570 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-208ENST00000519004 EPG5Q9HCE0 2579 aa8.53□□□□□ -1.04
PABPC1-208ENST00000519004 LINC01554Q52M75 96 aa8.53□□□□□ -1.04
PABPC1-208ENST00000519004 CFAP46Q8IYW2 2715 aa8.53□□□□□ -1.04
PABPC1-208ENST00000519004 PCOTHQ58A44 107 aa8.53□□□□□ -1.04
PABPC1-208ENST00000519004 FAM168BA1KXE4 195 aa8.52□□□□□ -1.05
PABPC1-208ENST00000519004 PLA2G2DQ9UNK4 145 aa8.52□□□□□ -1.05
PABPC1-208ENST00000519004 Q8NAQ8 132 aa8.51□□□□□ -1.05
PABPC1-208ENST00000519004 DEFB135Q30KP9 77 aa8.5□□□□□ -1.05
PABPC1-208ENST00000519004 OTOGQ6ZRI0 2925 aa8.5□□□□□ -1.05
PABPC1-208ENST00000519004 PLA2G1BP04054 148 aaKnown RBP8.49□□□□□ -1.05
PABPC1-208ENST00000519004 A8MWP4 228 aa8.49□□□□□ -1.05
PABPC1-208ENST00000519004 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
PABPC1-208ENST00000519004 ANK3Q12955 4377 aaKnown RBP8.48□□□□□ -1.05
PABPC1-208ENST00000519004 HRES1P13985 223 aa8.48□□□□□ -1.05
PABPC1-208ENST00000519004 IGLV8-61A0A075B6I0 122 aa8.48□□□□□ -1.05
PABPC1-208ENST00000519004 MDFIQ99750 246 aa8.47□□□□□ -1.05
PABPC1-208ENST00000519004 ANKRD17O75179 2603 aaKnown RBP8.46□□□□□ -1.06
PABPC1-208ENST00000519004 MUC6Q6W4X9 2439 aa8.46□□□□□ -1.06
PABPC1-208ENST00000519004 MMP24-AS1A0A0U1RRL7 71 aa8.45□□□□□ -1.06
PABPC1-208ENST00000519004 TLX1NBP0CAT3 122 aa8.45□□□□□ -1.06
PABPC1-208ENST00000519004 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
PABPC1-208ENST00000519004 LRRK2Q5S007 2527 aa8.43□□□□□ -1.06
PABPC1-208ENST00000519004 POLQO75417 2590 aa8.42□□□□□ -1.06
PABPC1-208ENST00000519004 SONP18583 2426 aaKnown RBP8.42□□□□□ -1.06
PABPC1-208ENST00000519004 NAV2Q8IVL1 2488 aa8.42□□□□□ -1.06
PABPC1-208ENST00000519004 SPART-AS1P0CW21 52 aa8.42□□□□□ -1.06
PABPC1-208ENST00000519004 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
PABPC1-208ENST00000519004 SETD2Q9BYW2 2564 aaPredicted RBP8.41□□□□□ -1.06
PABPC1-208ENST00000519004 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.07
PABPC1-208ENST00000519004 REG3GQ6UW15 175 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms