RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	SOSTDC1	Q6X4U4	206 aa		14.09	□□□□□ -0.15
CNOT7-204	ENST00000518885		Q6ZRX8	168 aa		14.09	□□□□□ -0.15
CNOT7-204	ENST00000518885	LINC00308	Q8TCZ7	52 aa		14.09	□□□□□ -0.15
CNOT7-204	ENST00000518885	COPS9	Q8WXC6	57 aa		14.09	□□□□□ -0.15
CNOT7-204	ENST00000518885	C4orf48	Q5BLP8	95 aa		14.07	□□□□□ -0.16
CNOT7-204	ENST00000518885	SCGB1D4	Q6XE38	83 aa		14.07	□□□□□ -0.16
CNOT7-204	ENST00000518885	C3orf22	Q8N5N4	141 aa		14.07	□□□□□ -0.16
CNOT7-204	ENST00000518885	LITAF	Q99732	161 aa		14.07	□□□□□ -0.16
CNOT7-204	ENST00000518885	ZNF73	O43830	326 aa	Predicted RBP	14.06	□□□□□ -0.16
CNOT7-204	ENST00000518885	RNF213	Q63HN8	5207 aa		14.05	□□□□□ -0.16
CNOT7-204	ENST00000518885	LINC00483	Q53H64	154 aa		14.04	□□□□□ -0.16
CNOT7-204	ENST00000518885	LINC00518	Q8N0U6	118 aa		14.04	□□□□□ -0.16
CNOT7-204	ENST00000518885	OR13C6P	Q8NH95	151 aa		14.04	□□□□□ -0.16
CNOT7-204	ENST00000518885	SNRPE	P62304	92 aa	Known RBP	14.03	□□□□□ -0.16
CNOT7-204	ENST00000518885	PPDPF	Q9H3Y8	114 aa		14.03	□□□□□ -0.16
CNOT7-204	ENST00000518885	EIF4EBP3	O60516	100 aa	Predicted RBP	14.02	□□□□□ -0.17
CNOT7-204	ENST00000518885	S100A2	P29034	98 aa		14.02	□□□□□ -0.17
CNOT7-204	ENST00000518885	GAGE2A	Q6NT46	116 aa		14.02	□□□□□ -0.17
CNOT7-204	ENST00000518885	SPANXD	Q9BXN6	97 aa		14.02	□□□□□ -0.17
CNOT7-204	ENST00000518885	LPA	P08519	4548 aa		14.01	□□□□□ -0.17
CNOT7-204	ENST00000518885		Q9BRP9	147 aa		14	□□□□□ -0.17
CNOT7-204	ENST00000518885	TTTY13	Q9BZ97	58 aa		14	□□□□□ -0.17
CNOT7-204	ENST00000518885		Q6ZVH6	145 aa		13.99	□□□□□ -0.17
CNOT7-204	ENST00000518885	C5orf52	A6NGY3	159 aa		13.98	□□□□□ -0.17
CNOT7-204	ENST00000518885	S100A6	P06703	90 aa		13.97	□□□□□ -0.17
CNOT7-204	ENST00000518885	IFITM1	P13164	125 aa		13.97	□□□□□ -0.17
CNOT7-204	ENST00000518885	ATOH7	Q8N100	152 aa		13.97	□□□□□ -0.17
CNOT7-204	ENST00000518885	ERC2-IT1	O76042	136 aa		13.96	□□□□□ -0.17
CNOT7-204	ENST00000518885	ANKRD39	Q53RE8	183 aa		13.96	□□□□□ -0.17
CNOT7-204	ENST00000518885		Q8NBF4	154 aa		13.96	□□□□□ -0.17
CNOT7-204	ENST00000518885	RETNLB	Q9BQ08	111 aa		13.94	□□□□□ -0.18
CNOT7-204	ENST00000518885	DHRS4-AS1	Q9P1J3	65 aa		13.94	□□□□□ -0.18
CNOT7-204	ENST00000518885	HSBP1L1	C9JCN9	74 aa		13.93	□□□□□ -0.18
CNOT7-204	ENST00000518885	SPINK1	P00995	79 aa		13.93	□□□□□ -0.18
CNOT7-204	ENST00000518885	SSBP3-AS1	Q7Z2R9	100 aa		13.93	□□□□□ -0.18
CNOT7-204	ENST00000518885	HIST3H2BB	Q8N257	126 aa		13.93	□□□□□ -0.18
CNOT7-204	ENST00000518885	IGLV9-49	A0A0B4J1Y8	123 aa		13.92	□□□□□ -0.18
CNOT7-204	ENST00000518885	HIST1H2BL	Q99880	126 aa		13.91	□□□□□ -0.18
CNOT7-204	ENST00000518885	MOBP	Q13875	183 aa		13.9	□□□□□ -0.18
CNOT7-204	ENST00000518885	SLC25A34	Q6PIV7	304 aa		13.9	□□□□□ -0.18
CNOT7-204	ENST00000518885	IGLV7-46	A0A075B6I9	117 aa		13.88	□□□□□ -0.19
CNOT7-204	ENST00000518885	COX7B	P24311	80 aa		13.87	□□□□□ -0.19
CNOT7-204	ENST00000518885	PCP2	Q8IVA1	136 aa		13.87	□□□□□ -0.19
CNOT7-204	ENST00000518885	TPRXL	Q17RH7	258 aa		13.86	□□□□□ -0.19
CNOT7-204	ENST00000518885	FP248	Q71RG6	208 aa	Predicted RBP	13.86	□□□□□ -0.19
CNOT7-204	ENST00000518885		A6NDN8	102 aa		13.85	□□□□□ -0.19
CNOT7-204	ENST00000518885	ELOF1	P60002	83 aa	Known RBP	13.85	□□□□□ -0.19
CNOT7-204	ENST00000518885	C6orf99	Q4VX62	202 aa		13.85	□□□□□ -0.19
CNOT7-204	ENST00000518885	C9orf153	Q5TBE3	101 aa		13.85	□□□□□ -0.19
CNOT7-204	ENST00000518885	TRBV7-6	A0A0J9YX20	115 aa		13.84	□□□□□ -0.19
CNOT7-204	ENST00000518885	RPS29	P62273	56 aa	Known RBP	13.84	□□□□□ -0.19
CNOT7-204	ENST00000518885	MUSTN1	Q8IVN3	82 aa		13.83	□□□□□ -0.2
CNOT7-204	ENST00000518885	CDIP1	Q9H305	208 aa		13.83	□□□□□ -0.2
CNOT7-204	ENST00000518885	ST20-AS1	Q8NBB2	130 aa		13.82	□□□□□ -0.2
CNOT7-204	ENST00000518885	TRAV13-2	A0A0B4J235	113 aa		13.81	□□□□□ -0.2
CNOT7-204	ENST00000518885		A0A1B0GWB2	263 aa		13.79	□□□□□ -0.2
CNOT7-204	ENST00000518885	SPRR1B	P22528	89 aa		13.78	□□□□□ -0.2
CNOT7-204	ENST00000518885	LAMTOR3	Q9UHA4	124 aa		13.78	□□□□□ -0.2
CNOT7-204	ENST00000518885		A4D1N5	150 aa		13.77	□□□□□ -0.21
CNOT7-204	ENST00000518885	SLC25A20	O43772	301 aa		13.75	□□□□□ -0.21
CNOT7-204	ENST00000518885	SCGB1D1	O95968	90 aa		13.75	□□□□□ -0.21
CNOT7-204	ENST00000518885	TAL2	Q16559	108 aa		13.75	□□□□□ -0.21
CNOT7-204	ENST00000518885	NHP2	Q9NX24	153 aa	Known RBP	13.75	□□□□□ -0.21
CNOT7-204	ENST00000518885		A0A0U1RQV1	116 aa		13.72	□□□□□ -0.21
CNOT7-204	ENST00000518885	TEX49	A0A1B0GTD5	131 aa		13.71	□□□□□ -0.21
CNOT7-204	ENST00000518885	VAMP3	Q15836	100 aa		13.7	□□□□□ -0.22
CNOT7-204	ENST00000518885		Q8N377	158 aa		13.7	□□□□□ -0.22
CNOT7-204	ENST00000518885	DEFB105A	Q8NG35	78 aa		13.69	□□□□□ -0.22
CNOT7-204	ENST00000518885	LIMD2	Q9BT23	127 aa		13.67	□□□□□ -0.22
CNOT7-204	ENST00000518885	SMIM11B	Q8TCY0	68 aa		13.66	□□□□□ -0.22
CNOT7-204	ENST00000518885	MUC2	Q02817	5179 aa		13.63	□□□□□ -0.23
CNOT7-204	ENST00000518885	HIST1H4G	Q99525	98 aa		13.63	□□□□□ -0.23
CNOT7-204	ENST00000518885	PRO1933	Q9H354	126 aa		13.63	□□□□□ -0.23
CNOT7-204	ENST00000518885		Q1RN00	199 aa		13.62	□□□□□ -0.23
CNOT7-204	ENST00000518885	IGLV5-48	A0A075B6I7	105 aa		13.61	□□□□□ -0.23
CNOT7-204	ENST00000518885	COX8A	P10176	69 aa		13.61	□□□□□ -0.23
CNOT7-204	ENST00000518885	KRTAP13-3	Q3SY46	172 aa		13.61	□□□□□ -0.23
CNOT7-204	ENST00000518885	DLEU1	O43261	78 aa		13.59	□□□□□ -0.23
CNOT7-204	ENST00000518885	CD164	Q04900	197 aa		13.59	□□□□□ -0.23
CNOT7-204	ENST00000518885	HRCT1	Q6UXD1	115 aa		13.56	□□□□□ -0.24
CNOT7-204	ENST00000518885		H7C2G1	150 aa		13.55	□□□□□ -0.24
CNOT7-204	ENST00000518885		F8WEM9	126 aa		13.53	□□□□□ -0.24
CNOT7-204	ENST00000518885	LINC01547	P58512	204 aa	Predicted RBP	13.53	□□□□□ -0.24
CNOT7-204	ENST00000518885	BVES-AS1	Q5T3Y7	98 aa		13.52	□□□□□ -0.25
CNOT7-204	ENST00000518885	LINC00575	Q6W349	94 aa		13.52	□□□□□ -0.25
CNOT7-204	ENST00000518885	SMIM29	Q86T20	159 aa		13.52	□□□□□ -0.25
CNOT7-204	ENST00000518885	VAMP8	Q9BV40	100 aa		13.52	□□□□□ -0.25
CNOT7-204	ENST00000518885	hADV29S1	A0JD25	119 aa		13.51	□□□□□ -0.25
CNOT7-204	ENST00000518885	SPATA45	Q537H7	98 aa		13.5	□□□□□ -0.25
CNOT7-204	ENST00000518885	PAM16	Q9Y3D7	125 aa		13.5	□□□□□ -0.25
CNOT7-204	ENST00000518885	C12orf57	Q99622	126 aa		13.49	□□□□□ -0.25
CNOT7-204	ENST00000518885	SEC61B	P60468	96 aa	Known RBP	13.48	□□□□□ -0.25
CNOT7-204	ENST00000518885	C14orf144	Q96I85	54 aa		13.48	□□□□□ -0.25
CNOT7-204	ENST00000518885	HIGD1B	Q9P298	99 aa		13.48	□□□□□ -0.25
CNOT7-204	ENST00000518885	SNCG	O76070	127 aa		13.46	□□□□□ -0.25
CNOT7-204	ENST00000518885	RAB37	Q96AX2	223 aa		13.46	□□□□□ -0.25
CNOT7-204	ENST00000518885	MUC17	Q685J3	4493 aa		13.46	□□□□□ -0.26
CNOT7-204	ENST00000518885		Q6ZQY7	126 aa		13.45	□□□□□ -0.26
CNOT7-204	ENST00000518885	ASB16-AS1	Q495Z4	193 aa		13.44	□□□□□ -0.26
CNOT7-204	ENST00000518885		Q5XG85	94 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms