RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 C2orf88Q9BSF0 95 aa3.32□□□□□ -1.88
CCDC6-203ENST00000518638 TOMM7Q9P0U1 55 aa3.32□□□□□ -1.88
CCDC6-203ENST00000518638 A0A1B0GUT8 65 aa3.31□□□□□ -1.88
CCDC6-203ENST00000518638 AMN1Q8IY45 258 aa3.31□□□□□ -1.88
CCDC6-203ENST00000518638 MAP1LC3AQ9H492 121 aa3.31□□□□□ -1.88
CCDC6-203ENST00000518638 C8orf17Q9NRJ1 99 aa3.31□□□□□ -1.88
CCDC6-203ENST00000518638 MED9Q9NWA0 146 aa3.31□□□□□ -1.88
CCDC6-203ENST00000518638 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
CCDC6-203ENST00000518638 LINC00862A6NCI5 91 aa3.3□□□□□ -1.88
CCDC6-203ENST00000518638 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
CCDC6-203ENST00000518638 RPL39P62891 51 aaKnown RBP3.3□□□□□ -1.88
CCDC6-203ENST00000518638 SEC11AP67812 179 aa3.3□□□□□ -1.88
CCDC6-203ENST00000518638 LINC01551Q86U37 167 aa3.3□□□□□ -1.88
CCDC6-203ENST00000518638 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
CCDC6-203ENST00000518638 USH2AO75445 5202 aa3.29□□□□□ -1.88
CCDC6-203ENST00000518638 BPY2O14599 106 aa3.29□□□□□ -1.88
CCDC6-203ENST00000518638 PCOTHQ58A44 107 aa3.29□□□□□ -1.88
CCDC6-203ENST00000518638 SPRR4Q96PI1 79 aa3.29□□□□□ -1.88
CCDC6-203ENST00000518638 HIGD2AQ9BW72 106 aa3.29□□□□□ -1.88
CCDC6-203ENST00000518638 TMEM126AQ9H061 195 aa3.29□□□□□ -1.88
CCDC6-203ENST00000518638 LINC00846Q9NV44 126 aa3.29□□□□□ -1.88
CCDC6-203ENST00000518638 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
CCDC6-203ENST00000518638 TRBV24-1A0A075B6N3 115 aa3.28□□□□□ -1.88
CCDC6-203ENST00000518638 HIGD1CA8MV81 97 aa3.28□□□□□ -1.88
CCDC6-203ENST00000518638 ARPC5O15511 151 aa3.28□□□□□ -1.88
CCDC6-203ENST00000518638 HERVK_113P63121 156 aa3.28□□□□□ -1.88
CCDC6-203ENST00000518638 ZNF345Q14585 488 aa3.28□□□□□ -1.88
CCDC6-203ENST00000518638 SMIM2Q9BVW6 85 aa3.28□□□□□ -1.88
CCDC6-203ENST00000518638 Q5BKY6 102 aa3.27□□□□□ -1.89
CCDC6-203ENST00000518638 SSBP3-AS1Q7Z2R9 100 aa3.27□□□□□ -1.89
CCDC6-203ENST00000518638 EIF5A2Q9GZV4 153 aaKnown RBP3.27□□□□□ -1.89
CCDC6-203ENST00000518638 SND1-IT1Q9HBX3 110 aa3.27□□□□□ -1.89
CCDC6-203ENST00000518638 TMEM250H0YL14 139 aa3.26□□□□□ -1.89
CCDC6-203ENST00000518638 M0R378 163 aa3.26□□□□□ -1.89
CCDC6-203ENST00000518638 CKS2P33552 79 aa3.26□□□□□ -1.89
CCDC6-203ENST00000518638 FAM19A3Q7Z5A8 133 aa3.26□□□□□ -1.89
CCDC6-203ENST00000518638 KANTRA0A1W2PQU2 76 aa3.25□□□□□ -1.89
CCDC6-203ENST00000518638 PPBPP02775 128 aa3.25□□□□□ -1.89
CCDC6-203ENST00000518638 MRPL51Q4U2R6 128 aaKnown RBP3.25□□□□□ -1.89
CCDC6-203ENST00000518638 FAM104BQ5XKR9 115 aa3.25□□□□□ -1.89
CCDC6-203ENST00000518638 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
CCDC6-203ENST00000518638 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
CCDC6-203ENST00000518638 YPEL4Q96NS1 127 aa3.24□□□□□ -1.89
CCDC6-203ENST00000518638 AMELXQ99217 191 aa3.24□□□□□ -1.89
CCDC6-203ENST00000518638 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
CCDC6-203ENST00000518638 CYSLTR1Q9Y271 337 aa3.24□□□□□ -1.89
CCDC6-203ENST00000518638 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
CCDC6-203ENST00000518638 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
CCDC6-203ENST00000518638 F8W036 122 aa3.23□□□□□ -1.89
CCDC6-203ENST00000518638 S100A8P05109 93 aa3.23□□□□□ -1.89
CCDC6-203ENST00000518638 LINC00614P0C842 121 aa3.23□□□□□ -1.89
CCDC6-203ENST00000518638 MOBPQ13875 183 aa3.23□□□□□ -1.89
CCDC6-203ENST00000518638 C1orf195Q5TG92 126 aa3.23□□□□□ -1.89
CCDC6-203ENST00000518638 COMMD7Q86VX2 200 aa3.23□□□□□ -1.89
CCDC6-203ENST00000518638 COX7B2Q8TF08 81 aa3.23□□□□□ -1.89
CCDC6-203ENST00000518638 CDKN2A-AS1Q9UH64 79 aa3.23□□□□□ -1.89
CCDC6-203ENST00000518638 NAT8BQ9UHF3 227 aa3.23□□□□□ -1.89
CCDC6-203ENST00000518638 TMEM223A0PJW6 202 aa3.22□□□□□ -1.89
CCDC6-203ENST00000518638 HMSDA8MTL9 139 aa3.22□□□□□ -1.89
CCDC6-203ENST00000518638 K7EMI3 77 aa3.22□□□□□ -1.89
CCDC6-203ENST00000518638 COX17Q14061 63 aa3.22□□□□□ -1.89
CCDC6-203ENST00000518638 ORMDL3Q8N138 153 aa3.22□□□□□ -1.89
CCDC6-203ENST00000518638 OSTCQ9NRP0 149 aa3.22□□□□□ -1.89
CCDC6-203ENST00000518638 A0A096LNJ9 63 aa3.21□□□□□ -1.9
CCDC6-203ENST00000518638 C9JQL5 133 aa3.21□□□□□ -1.9
CCDC6-203ENST00000518638 D6R8Y8 96 aa3.21□□□□□ -1.9
CCDC6-203ENST00000518638 SCO1O75880 301 aa3.21□□□□□ -1.9
CCDC6-203ENST00000518638 MP68P56378 58 aa3.21□□□□□ -1.9
CCDC6-203ENST00000518638 RAB5BP61020 215 aa3.21□□□□□ -1.9
CCDC6-203ENST00000518638 ANAPC13Q9BS18 74 aa3.21□□□□□ -1.9
CCDC6-203ENST00000518638 LAMTOR2Q9Y2Q5 125 aa3.21□□□□□ -1.9
CCDC6-203ENST00000518638 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
CCDC6-203ENST00000518638 ETDCA0A1B0GVM5 59 aa3.2□□□□□ -1.9
CCDC6-203ENST00000518638 C9orf92A6NGG3 77 aa3.2□□□□□ -1.9
CCDC6-203ENST00000518638 NPYP01303 97 aa3.2□□□□□ -1.9
CCDC6-203ENST00000518638 IGLV6-57P01721 117 aa3.2□□□□□ -1.9
CCDC6-203ENST00000518638 SCGB1C2P0DMR2 95 aa3.2□□□□□ -1.9
CCDC6-203ENST00000518638 SFTA2Q6UW10 78 aa3.2□□□□□ -1.9
CCDC6-203ENST00000518638 SCGB1D4Q6XE38 83 aa3.2□□□□□ -1.9
CCDC6-203ENST00000518638 FA2HQ7L5A8 372 aa3.2□□□□□ -1.9
CCDC6-203ENST00000518638 A0A1B0GV72 72 aa3.19□□□□□ -1.9
CCDC6-203ENST00000518638 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
CCDC6-203ENST00000518638 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
CCDC6-203ENST00000518638 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
CCDC6-203ENST00000518638 SMCR5Q8TEV8 140 aa3.19□□□□□ -1.9
CCDC6-203ENST00000518638 SMIM7Q9BQ49 75 aa3.19□□□□□ -1.9
CCDC6-203ENST00000518638 V9GYV3 84 aa3.19□□□□□ -1.9
CCDC6-203ENST00000518638 LINC01549A6NIU2 74 aa3.18□□□□□ -1.9
CCDC6-203ENST00000518638 IGIPA6NJ69 53 aa3.18□□□□□ -1.9
CCDC6-203ENST00000518638 H3BRM9 83 aa3.18□□□□□ -1.9
CCDC6-203ENST00000518638 C9orf153Q5TBE3 101 aa3.18□□□□□ -1.9
CCDC6-203ENST00000518638 Q5W150 140 aa3.18□□□□□ -1.9
CCDC6-203ENST00000518638 PRELID3AQ96N28 172 aa3.18□□□□□ -1.9
CCDC6-203ENST00000518638 ERG28Q9UKR5 140 aa3.18□□□□□ -1.9
CCDC6-203ENST00000518638 TRAV9-1A0A075B6T8 112 aa3.17□□□□□ -1.9
CCDC6-203ENST00000518638 SPRR1AP35321 89 aa3.17□□□□□ -1.9
CCDC6-203ENST00000518638 Q6Q795 121 aa3.17□□□□□ -1.9
CCDC6-203ENST00000518638 TMEM136Q6ZRR5 245 aa3.17□□□□□ -1.9
CCDC6-203ENST00000518638 SMIM27A0A1W2PRY6 76 aa3.16□□□□□ -1.9
CCDC6-203ENST00000518638 DDTP30046 118 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms