RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 AGPAT4-IT1Q9H0P7 198 aa0.35□□□□□ -2.35
SMN1-210ENST00000518504 RPRMQ9NS64 109 aa0.35□□□□□ -2.35
SMN1-210ENST00000518504 LOC100130705A0A1B0GUX0 176 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 RBAKDNA6NC62 111 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 MCRIP1C9JLW8 97 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 TNFP01375 233 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 IFNA17P01571 189 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 SMR3BP02814 79 aaPredicted RBP0.34□□□□□ -2.36
SMN1-210ENST00000518504 HIST1H1DP16402 221 aaKnown RBP0.34□□□□□ -2.36
SMN1-210ENST00000518504 NCMAPQ5T1S8 102 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 Q6AWC8 147 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 SPATA8Q6RVD6 105 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 DEFB108BQ8NET1 73 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 DEFB104AQ8WTQ1 72 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 LSM10Q969L4 123 aaKnown RBP0.34□□□□□ -2.36
SMN1-210ENST00000518504 SEC11CQ9BY50 192 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 RERGLQ9H628 205 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 SERP1Q9Y6X1 66 aa0.34□□□□□ -2.36
SMN1-210ENST00000518504 DSTQ03001 7570 aaKnown RBP0.34□□□□□ -2.36
SMN1-210ENST00000518504 TRBV10-3A0A0K0K1G6 114 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 A0A1B0GV90 55 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 FAM25AB3EWG3 89 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 FAM25CB3EWG5 89 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 FAM25GB3EWG6 89 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 SNCGO76070 127 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 FGF7P21781 194 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 CCL8P80075 99 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 MEIG1Q5JSS6 88 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 S100A7L2Q5SY68 101 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 FAM74A4Q5TZK3 123 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 RPL7L1Q6DKI1 246 aaKnown RBP0.33□□□□□ -2.36
SMN1-210ENST00000518504 ZNF818PQ6ZRF7 136 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 C4orf33Q8N1A6 199 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 Q8N8P6 123 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.33□□□□□ -2.36
SMN1-210ENST00000518504 COPS9Q8WXC6 57 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 Q96NJ1 140 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 NAA60Q9H7X0 242 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 APLNQ9ULZ1 77 aa0.33□□□□□ -2.36
SMN1-210ENST00000518504 GVQW2A0A096LPI5 108 aaPredicted RBP0.32□□□□□ -2.36
SMN1-210ENST00000518504 TRBV7-1A0A0A6YYK4 115 aa0.32□□□□□ -2.36
SMN1-210ENST00000518504 A6NIN4 97 aa0.32□□□□□ -2.36
SMN1-210ENST00000518504 DLEU1O43261 78 aa0.32□□□□□ -2.36
SMN1-210ENST00000518504 DCDP81605 110 aaKnown RBP0.32□□□□□ -2.36
SMN1-210ENST00000518504 DEFB112Q30KQ8 113 aa0.32□□□□□ -2.36
SMN1-210ENST00000518504 C12orf73Q69YU5 71 aa0.32□□□□□ -2.36
SMN1-210ENST00000518504 SPTSSBQ8NFR3 76 aa0.32□□□□□ -2.36
SMN1-210ENST00000518504 PROK2Q9HC23 129 aa0.32□□□□□ -2.36
SMN1-210ENST00000518504 V9GYV3 84 aa0.32□□□□□ -2.36
SMN1-210ENST00000518504 FLGP20930 4061 aaPredicted RBP0.31□□□□□ -2.36
SMN1-210ENST00000518504 APOC4-APOC2K7ER74 178 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 SIX6O95475 246 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 SPRR2EP22531 72 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 SPRR2BP35325 72 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 SPRR2AP35326 72 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 EDDM3BP56851 147 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 SPINK7P58062 85 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 HAMPP81172 84 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 SMIM11BQ8TCY0 68 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 PP6455Q8WZ26 134 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 COX14Q96I36 57 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 C2orf88Q9BSF0 95 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 PLAC8Q9NZF1 115 aa0.31□□□□□ -2.36
SMN1-210ENST00000518504 LINC00587B1AMM8 73 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 F2Z2F3 143 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 LYNX1G3V0Z9 82 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 SPRR2DP22532 72 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 RBM3P98179 157 aaKnown RBP0.3□□□□□ -2.36
SMN1-210ENST00000518504 INSL4Q14641 139 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 DEFB110Q30KQ9 67 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 Q56UQ5 140 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 WFDC6Q9BQY6 131 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 FAIMQ9NVQ4 179 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 LINC00312Q9Y6C7 94 aa0.3□□□□□ -2.36
SMN1-210ENST00000518504 TRGV1A0A0A0MS02 117 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 TRAV13-2A0A0B4J235 113 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 PIGBOS1A0A0B4J2F0 54 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 MIF4GDA9UHW6 222 aaKnown RBP0.29□□□□□ -2.36
SMN1-210ENST00000518504 HCG22E2RYF7 251 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 PRH1P02810 166 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 AKAIN1P0CW23 69 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 ACYP2P14621 99 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 VMO1Q7Z5L0 202 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 LINC01600Q96MT4 127 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 PRR15LQ9BU68 103 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 SCN3BQ9NY72 215 aa0.29□□□□□ -2.36
SMN1-210ENST00000518504 A0A0D9SFI3 127 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 TMEM14DPA8MWL7 114 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 APOC2P02655 101 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 MT1FP04733 61 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 MT4P47944 62 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 CATR1Q13166 79 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 Q5VV11 94 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 Q6ZRX8 168 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 PPP3R2Q96LZ3 170 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 SCP2D1Q9UJQ7 156 aa0.28□□□□□ -2.36
SMN1-210ENST00000518504 TRAV1-2A0A0B4J238 106 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 ATP6V1G2-DDX39BF2Z307 99 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 G3V318 75 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms