RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 Q8N377 158 aa4.41□□□□□ -1.7
CPNE3-203ENST00000517490 Q9BRP9 147 aa4.41□□□□□ -1.7
CPNE3-203ENST00000517490 Q8NDZ9 215 aa4.4□□□□□ -1.7
CPNE3-203ENST00000517490 DEFB116Q30KQ4 102 aa4.4□□□□□ -1.7
CPNE3-203ENST00000517490 FP248Q71RG6 208 aaPredicted RBP4.4□□□□□ -1.7
CPNE3-203ENST00000517490 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.71
CPNE3-203ENST00000517490 ST20-AS1Q8NBB2 130 aa4.4□□□□□ -1.71
CPNE3-203ENST00000517490 C1orf64Q8NEQ6 169 aa4.4□□□□□ -1.71
CPNE3-203ENST00000517490 LINC00476Q8WZB0 136 aa4.4□□□□□ -1.71
CPNE3-203ENST00000517490 ZNF462Q96JM2 2506 aa4.4□□□□□ -1.71
CPNE3-203ENST00000517490 EYSQ5T1H1 3165 aa4.39□□□□□ -1.71
CPNE3-203ENST00000517490 K7EQZ3 153 aa4.39□□□□□ -1.71
CPNE3-203ENST00000517490 C15orf56Q8N910 161 aa4.39□□□□□ -1.71
CPNE3-203ENST00000517490 IGLV5-48A0A075B6I7 105 aa4.39□□□□□ -1.71
CPNE3-203ENST00000517490 SMR3AQ99954 134 aa4.39□□□□□ -1.71
CPNE3-203ENST00000517490 ZZEF1O43149 2961 aa4.39□□□□□ -1.71
CPNE3-203ENST00000517490 ADGRG4Q8IZF6 3080 aa4.39□□□□□ -1.71
CPNE3-203ENST00000517490 EPM2AB3EWF7 344 aa4.39□□□□□ -1.71
CPNE3-203ENST00000517490 MTORP42345 2549 aa4.39□□□□□ -1.71
CPNE3-203ENST00000517490 COL6A3P12111 3177 aa4.38□□□□□ -1.71
CPNE3-203ENST00000517490 IGLV1-50A0A075B6I6 118 aa4.38□□□□□ -1.71
CPNE3-203ENST00000517490 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-203ENST00000517490 EPG5Q9HCE0 2579 aa4.37□□□□□ -1.71
CPNE3-203ENST00000517490 BOD1L1Q8NFC6 3051 aa4.37□□□□□ -1.71
CPNE3-203ENST00000517490 LCA10Q71F78 164 aa4.37□□□□□ -1.71
CPNE3-203ENST00000517490 RBM12B-AS1Q9P1G2 102 aa4.37□□□□□ -1.71
CPNE3-203ENST00000517490 KALRNO60229 2985 aa4.37□□□□□ -1.71
CPNE3-203ENST00000517490 A0A1W2PNM2 257 aa4.37□□□□□ -1.71
CPNE3-203ENST00000517490 PRLHP81277 87 aa4.37□□□□□ -1.71
CPNE3-203ENST00000517490 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
CPNE3-203ENST00000517490 TACC2O95359 2948 aa4.36□□□□□ -1.71
CPNE3-203ENST00000517490 Q75L30 129 aa4.36□□□□□ -1.71
CPNE3-203ENST00000517490 TLX1NBP0CAT3 122 aa4.36□□□□□ -1.71
CPNE3-203ENST00000517490 ZFYVE26Q68DK2 2539 aa4.36□□□□□ -1.71
CPNE3-203ENST00000517490 TRAV22A0A0B4J277 110 aa4.35□□□□□ -1.71
CPNE3-203ENST00000517490 Q1T7F1 81 aa4.35□□□□□ -1.71
CPNE3-203ENST00000517490 A8MUN3 132 aa4.35□□□□□ -1.71
CPNE3-203ENST00000517490 KRTAP1-3Q8IUG1 177 aa4.35□□□□□ -1.71
CPNE3-203ENST00000517490 PLA2G1BP04054 148 aaKnown RBP4.35□□□□□ -1.71
CPNE3-203ENST00000517490 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
CPNE3-203ENST00000517490 KTN1-AS1Q86SY8 53 aa4.35□□□□□ -1.71
CPNE3-203ENST00000517490 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
CPNE3-203ENST00000517490 PCOTHQ58A44 107 aa4.34□□□□□ -1.71
CPNE3-203ENST00000517490 TP53AIP1Q9HCN2 124 aa4.34□□□□□ -1.71
CPNE3-203ENST00000517490 LRBAP50851 2863 aa4.34□□□□□ -1.71
CPNE3-203ENST00000517490 CYP4F30PQ9H0H9 118 aa4.34□□□□□ -1.71
CPNE3-203ENST00000517490 IGLV7-46A0A075B6I9 117 aa4.34□□□□□ -1.72
CPNE3-203ENST00000517490 FAM168BA1KXE4 195 aa4.34□□□□□ -1.72
CPNE3-203ENST00000517490 FAM229BQ4G0N7 80 aa4.34□□□□□ -1.72
CPNE3-203ENST00000517490 KRTAP10-3P60369 221 aa4.33□□□□□ -1.72
CPNE3-203ENST00000517490 IGFL1Q6UW32 110 aa4.33□□□□□ -1.72
CPNE3-203ENST00000517490 TNRC18O15417 2968 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-203ENST00000517490 SPRR4Q96PI1 79 aa4.33□□□□□ -1.72
CPNE3-203ENST00000517490 A8MWP4 228 aa4.33□□□□□ -1.72
CPNE3-203ENST00000517490 RPL37AP61513 92 aaKnown RBP4.32□□□□□ -1.72
CPNE3-203ENST00000517490 SPANXA2-OT1Q8N9U9 137 aa4.32□□□□□ -1.72
CPNE3-203ENST00000517490 ACANP16112 2415 aa4.32□□□□□ -1.72
CPNE3-203ENST00000517490 DSCR10P59022 87 aa4.32□□□□□ -1.72
CPNE3-203ENST00000517490 C8orf87E5RJ46 101 aa4.31□□□□□ -1.72
CPNE3-203ENST00000517490 IGHV6-1A0A0B4J1U7 121 aa4.31□□□□□ -1.72
CPNE3-203ENST00000517490 KRTAP21-3Q3LHN1 58 aa4.31□□□□□ -1.72
CPNE3-203ENST00000517490 RETNLBQ9BQ08 111 aa4.31□□□□□ -1.72
CPNE3-203ENST00000517490 C16orf90A8MZG2 172 aa4.3□□□□□ -1.72
CPNE3-203ENST00000517490 WDFY3Q8IZQ1 3526 aa4.3□□□□□ -1.72
CPNE3-203ENST00000517490 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
CPNE3-203ENST00000517490 KRTAP1-1Q07627 177 aa4.3□□□□□ -1.72
CPNE3-203ENST00000517490 COA5Q86WW8 74 aa4.3□□□□□ -1.72
CPNE3-203ENST00000517490 LINC00588Q9Y4M8 146 aa4.3□□□□□ -1.72
CPNE3-203ENST00000517490 LOC400499M0QZD8 3231 aa4.29□□□□□ -1.72
CPNE3-203ENST00000517490 CR1P17927 2039 aa4.29□□□□□ -1.72
CPNE3-203ENST00000517490 SPINK6Q6UWN8 80 aa4.29□□□□□ -1.72
CPNE3-203ENST00000517490 MOBPQ13875 183 aa4.28□□□□□ -1.72
CPNE3-203ENST00000517490 ATP11AUNQ6ZP68 121 aa4.28□□□□□ -1.72
CPNE3-203ENST00000517490 SPAG11AQ6PDA7 123 aa4.28□□□□□ -1.72
CPNE3-203ENST00000517490 DMXL2Q8TDJ6 3036 aa4.27□□□□□ -1.73
CPNE3-203ENST00000517490 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
CPNE3-203ENST00000517490 CHD6Q8TD26 2715 aa4.27□□□□□ -1.73
CPNE3-203ENST00000517490 SPRR1AP35321 89 aa4.27□□□□□ -1.73
CPNE3-203ENST00000517490 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
CPNE3-203ENST00000517490 LOC101927531A0A1B0GV80 90 aa4.27□□□□□ -1.73
CPNE3-203ENST00000517490 HRNRQ86YZ3 2850 aaPredicted RBP4.26□□□□□ -1.73
CPNE3-203ENST00000517490 MAP1AP78559 2803 aaPredicted RBP4.26□□□□□ -1.73
CPNE3-203ENST00000517490 A0A0G2JQZ4 141 aa4.26□□□□□ -1.73
CPNE3-203ENST00000517490 A0A1W2PNN7 141 aa4.26□□□□□ -1.73
CPNE3-203ENST00000517490 PHF5AQ7RTV0 110 aaKnown RBP4.26□□□□□ -1.73
CPNE3-203ENST00000517490 FLNAP21333 2647 aaKnown RBP4.26□□□□□ -1.73
CPNE3-203ENST00000517490 LY6G6CO95867 125 aa4.26□□□□□ -1.73
CPNE3-203ENST00000517490 KRTAP26-1Q6PEX3 210 aa4.26□□□□□ -1.73
CPNE3-203ENST00000517490 CENPEQ02224 2701 aa4.25□□□□□ -1.73
CPNE3-203ENST00000517490 ATMQ13315 3056 aa4.25□□□□□ -1.73
CPNE3-203ENST00000517490 NUPR2A6NF83 97 aa4.24□□□□□ -1.73
CPNE3-203ENST00000517490 ACYP2P14621 99 aa4.24□□□□□ -1.73
CPNE3-203ENST00000517490 C7orf65Q6ZTY9 151 aa4.23□□□□□ -1.73
CPNE3-203ENST00000517490 ZCCHC13Q8WW36 166 aaKnown RBP4.23□□□□□ -1.73
CPNE3-203ENST00000517490 CASC10Q5T4H9 136 aa4.23□□□□□ -1.73
CPNE3-203ENST00000517490 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
CPNE3-203ENST00000517490 C8orf17Q9NRJ1 99 aa4.22□□□□□ -1.73
CPNE3-203ENST00000517490 LCE6AA0A183 80 aa4.22□□□□□ -1.73
CPNE3-203ENST00000517490 KRTAP10-11P60412 298 aa4.22□□□□□ -1.73
CPNE3-203ENST00000517490 Q8N9P0 234 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms