RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 ZNF56Q15929 161 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 Q6Q795 121 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 SCGB1D4Q6XE38 83 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 C2orf91Q6ZV80 131 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 DERL1Q9BUN8 251 aa2.81□□□□□ -1.96
CPNE3-202ENST00000517391 TMSB15BA0A087X1C1 80 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 A6NED7 52 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 CRPP02741 224 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 FGF6P10767 208 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 MIAQ16674 131 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 FAM19A2Q8N3H0 131 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 DNAJC30Q96LL9 226 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 SPCS1Q9Y6A9 102 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 R4GN34 69 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 PCLOQ9Y6V0 5065 aa2.8□□□□□ -1.96
CPNE3-202ENST00000517391 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
CPNE3-202ENST00000517391 TRBV25-1A0A075B6N4 114 aa2.79□□□□□ -1.96
CPNE3-202ENST00000517391 IGHV1-24A0A0C4DH33 117 aa2.79□□□□□ -1.96
CPNE3-202ENST00000517391 IGLC6P0CF74 106 aa2.79□□□□□ -1.96
CPNE3-202ENST00000517391 SMIM13P0DJ93 91 aa2.79□□□□□ -1.96
CPNE3-202ENST00000517391 FOXA3P55318 350 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-202ENST00000517391 HBBP68871 147 aa2.79□□□□□ -1.96
CPNE3-202ENST00000517391 SMAGPQ0VAQ4 97 aa2.79□□□□□ -1.96
CPNE3-202ENST00000517391 Q5VSD8 79 aa2.79□□□□□ -1.96
CPNE3-202ENST00000517391 Q6ZSA8 131 aa2.79□□□□□ -1.96
CPNE3-202ENST00000517391 HSPG2P98160 4391 aa2.79□□□□□ -1.96
CPNE3-202ENST00000517391 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.96
CPNE3-202ENST00000517391 LRP1BQ9NZR2 4599 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 A0A1B0GX51 115 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 C19orf71A6NCJ1 209 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 H3BMG7 143 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 H3BUT2 72 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 M0QY20 66 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 ANGP03950 147 aaKnown RBP2.78□□□□□ -1.96
CPNE3-202ENST00000517391 HRES1P13985 223 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 ATOH7Q8N100 152 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 LINC00304Q8N9R0 145 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 NUP35Q8NFH5 326 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 OR13C6PQ8NH95 151 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 CNFNQ9BYD5 112 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 DPH3P1Q9H4G8 78 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 RYR1P21817 5038 aa2.78□□□□□ -1.96
CPNE3-202ENST00000517391 IGLV6-57P01721 117 aa2.77□□□□□ -1.97
CPNE3-202ENST00000517391 MGPP08493 103 aa2.77□□□□□ -1.97
CPNE3-202ENST00000517391 FUSP35637 526 aaKnown RBP eCLIP2.77□□□□□ -1.97
CPNE3-202ENST00000517391 RNASE7Q9H1E1 156 aaKnown RBP2.77□□□□□ -1.97
CPNE3-202ENST00000517391 MAP1LC3AQ9H492 121 aa2.77□□□□□ -1.97
CPNE3-202ENST00000517391 LINC01546A6NGU7 62 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 HIGD1CA8MV81 97 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 UBE2L6O14933 153 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 LECT2O14960 151 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 NCR2O95944 276 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 WFDC2Q14508 124 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 C4orf26Q17RF5 130 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 LYRM7Q5U5X0 104 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 LYZL1Q6UWQ5 148 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 ENHOQ6UWT2 76 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 FAM19A5Q7Z5A7 132 aaPredicted RBP2.76□□□□□ -1.97
CPNE3-202ENST00000517391 DEFB104AQ8WTQ1 72 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 LINC01600Q96MT4 127 aa2.76□□□□□ -1.97
CPNE3-202ENST00000517391 DNAH5Q8TE73 4624 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 APOBP04114 4563 aaKnown RBP2.75□□□□□ -1.97
CPNE3-202ENST00000517391 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.75□□□□□ -1.97
CPNE3-202ENST00000517391 A0A1B0GU33 70 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 PPP1R17O96001 155 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 SMR3BP02814 79 aaPredicted RBP2.75□□□□□ -1.97
CPNE3-202ENST00000517391 SPINK8P0C7L1 97 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 CNBPP62633 177 aaKnown RBP2.75□□□□□ -1.97
CPNE3-202ENST00000517391 Q6ZUT4 128 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 LINC00269Q8N2A0 174 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 SMIM20Q8N5G0 67 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 PKIGQ9Y2B9 76 aa2.75□□□□□ -1.97
CPNE3-202ENST00000517391 TRBV20-1A0A075B6N2 111 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 A0A1B0GUT8 65 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 TINCRA0A1B0GVN0 87 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 APOMO95445 188 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 HBDP02042 147 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 SCXQ7RTU7 201 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 C9orf163Q8N9P6 203 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 PPDPFLQ8WWR9 84 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 RAB37Q96AX2 223 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 HIGD2AQ9BW72 106 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 IMUPQ9GZP8 106 aa2.74□□□□□ -1.97
CPNE3-202ENST00000517391 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 TRBV6-5A0A0K0K1A5 114 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 A0A1W2PNN7 141 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 SDHAF1A6NFY7 115 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 I3L3M4 83 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 J3KT08 172 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 IFITM1P13164 125 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 HAMPP81172 84 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 KRTAP26-1Q6PEX3 210 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 CLPSL2Q6UWE3 100 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 Q6ZRU5 148 aa2.73□□□□□ -1.97
CPNE3-202ENST00000517391 TEN1Q86WV5 123 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms