RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 HIST1H1AQ02539 215 aaPredicted RBP-4.74□□□□□ -3.17
SNORA40.16-201ENST00000517238 OR9Q1Q8NGQ5 310 aa-4.74□□□□□ -3.17
SNORA40.16-201ENST00000517238 SHPRHQ149N8 1683 aa-4.75□□□□□ -3.17
SNORA40.16-201ENST00000517238 BVES-AS1Q5T3Y7 98 aa-4.75□□□□□ -3.17
SNORA40.16-201ENST00000517238 VAMP8Q9BV40 100 aa-4.75□□□□□ -3.17
SNORA40.16-201ENST00000517238 ATP10BO94823 1461 aa-4.75□□□□□ -3.17
SNORA40.16-201ENST00000517238 RPP14O95059 124 aaKnown RBP-4.76□□□□□ -3.17
SNORA40.16-201ENST00000517238 LEPROTL1O95214 131 aa-4.76□□□□□ -3.17
SNORA40.16-201ENST00000517238 IGLC2P0DOY2 106 aa-4.76□□□□□ -3.17
SNORA40.16-201ENST00000517238 IGLC3P0DOY3 106 aa-4.76□□□□□ -3.17
SNORA40.16-201ENST00000517238 THEM6Q8WUY1 208 aa-4.76□□□□□ -3.17
SNORA40.16-201ENST00000517238 NKIRAS1Q9NYS0 192 aa-4.76□□□□□ -3.17
SNORA40.16-201ENST00000517238 MAGOHP61326 146 aaKnown RBP-4.77□□□□□ -3.17
SNORA40.16-201ENST00000517238 C12orf57Q99622 126 aa-4.77□□□□□ -3.17
SNORA40.16-201ENST00000517238 FAM135AQ9P2D6 1515 aa-4.77□□□□□ -3.17
SNORA40.16-201ENST00000517238 ROCK1Q13464 1354 aa-4.78□□□□□ -3.17
SNORA40.16-201ENST00000517238 COX6CP09669 75 aa-4.78□□□□□ -3.17
SNORA40.16-201ENST00000517238 REEP5Q00765 189 aa-4.78□□□□□ -3.17
SNORA40.16-201ENST00000517238 TCEAL4Q96EI5 215 aa-4.78□□□□□ -3.17
SNORA40.16-201ENST00000517238 KIF21BO75037 1637 aa-4.79□□□□□ -3.18
SNORA40.16-201ENST00000517238 NESP48681 1621 aa-4.79□□□□□ -3.18
SNORA40.16-201ENST00000517238 C5P01031 1676 aa-4.79□□□□□ -3.18
SNORA40.16-201ENST00000517238 MRC2Q9UBG0 1479 aa-4.79□□□□□ -3.18
SNORA40.16-201ENST00000517238 LSM6P62312 80 aaKnown RBP-4.79□□□□□ -3.18
SNORA40.16-201ENST00000517238 RGS21Q2M5E4 152 aa-4.79□□□□□ -3.18
SNORA40.16-201ENST00000517238 PTRHD1Q6GMV3 140 aaKnown RBP-4.79□□□□□ -3.18
SNORA40.16-201ENST00000517238 PLIN4Q96Q06 1357 aa-4.79□□□□□ -3.18
SNORA40.16-201ENST00000517238 TOPAZ1Q8N9V7 1692 aa-4.8□□□□□ -3.18
SNORA40.16-201ENST00000517238 ITSN2Q9NZM3 1697 aa-4.8□□□□□ -3.18
SNORA40.16-201ENST00000517238 OVOS2A0A0G2JMS6 1433 aa-4.8□□□□□ -3.18
SNORA40.16-201ENST00000517238 TNFSF15O95150 251 aa-4.8□□□□□ -3.18
SNORA40.16-201ENST00000517238 Q56UQ5 140 aa-4.8□□□□□ -3.18
SNORA40.16-201ENST00000517238 MANBALQ9NQG1 85 aa-4.8□□□□□ -3.18
SNORA40.16-201ENST00000517238 CENPFP49454 3210 aa-4.8□□□□□ -3.18
SNORA40.16-201ENST00000517238 SPEF2Q9C093 1822 aa-4.81□□□□□ -3.18
SNORA40.16-201ENST00000517238 SIKE1Q9BRV8 207 aa-4.81□□□□□ -3.18
SNORA40.16-201ENST00000517238 LINC00474Q9P2X8 69 aa-4.81□□□□□ -3.18
SNORA40.16-201ENST00000517238 ASPMQ8IZT6 3477 aa-4.81□□□□□ -3.18
SNORA40.16-201ENST00000517238 CROCC2H7BZ55 1655 aa-4.82□□□□□ -3.18
SNORA40.16-201ENST00000517238 KIF1AQ12756 1690 aa-4.82□□□□□ -3.18
SNORA40.16-201ENST00000517238 RPS27P42677 84 aaKnown RBP-4.82□□□□□ -3.18
SNORA40.16-201ENST00000517238 C12orf73Q69YU5 71 aa-4.82□□□□□ -3.18
SNORA40.16-201ENST00000517238 RPS27LQ71UM5 84 aaKnown RBP-4.82□□□□□ -3.18
SNORA40.16-201ENST00000517238 CDK5RAP2Q96SN8 1893 aa-4.82□□□□□ -3.18
SNORA40.16-201ENST00000517238 PFDN1O60925 122 aa-4.83□□□□□ -3.18
SNORA40.16-201ENST00000517238 SMIM20Q8N5G0 67 aa-4.83□□□□□ -3.18
SNORA40.16-201ENST00000517238 SPANXDQ9BXN6 97 aa-4.83□□□□□ -3.18
SNORA40.16-201ENST00000517238 ARL2BPQ9Y2Y0 163 aa-4.83□□□□□ -3.18
SNORA40.16-201ENST00000517238 ERICH2A1L162 156 aa-4.84□□□□□ -3.18
SNORA40.16-201ENST00000517238 NDUFC1O43677 76 aa-4.84□□□□□ -3.18
SNORA40.16-201ENST00000517238 GNG3P63215 75 aa-4.84□□□□□ -3.18
SNORA40.16-201ENST00000517238 SMIM23A6NLE4 172 aa-4.85□□□□□ -3.19
SNORA40.16-201ENST00000517238 TCTAP57738 103 aa-4.85□□□□□ -3.19
SNORA40.16-201ENST00000517238 GAFA1Q96PS6 74 aa-4.85□□□□□ -3.19
SNORA40.16-201ENST00000517238 A0A1W2PRE2 83 aa-4.86□□□□□ -3.19
SNORA40.16-201ENST00000517238 MRPS10P82664 201 aaKnown RBP-4.86□□□□□ -3.19
SNORA40.16-201ENST00000517238 Q0VG73 95 aa-4.86□□□□□ -3.19
SNORA40.16-201ENST00000517238 LLPHQ9BRT6 129 aaKnown RBP-4.86□□□□□ -3.19
SNORA40.16-201ENST00000517238 PRO1854Q9UHT4 67 aa-4.86□□□□□ -3.19
SNORA40.16-201ENST00000517238 NCOA2Q15596 1464 aa-4.87□□□□□ -3.19
SNORA40.16-201ENST00000517238 YKT6O15498 198 aa-4.87□□□□□ -3.19
SNORA40.16-201ENST00000517238 KCNRGQ8N5I3 272 aa-4.87□□□□□ -3.19
SNORA40.16-201ENST00000517238 ANP32BQ92688 251 aaKnown RBP-4.87□□□□□ -3.19
SNORA40.16-201ENST00000517238 UBR1Q8IWV7 1749 aa-4.87□□□□□ -3.19
SNORA40.16-201ENST00000517238 DNAH12Q6ZR08 3092 aa-4.87□□□□□ -3.19
SNORA40.16-201ENST00000517238 NWD1Q149M9 1564 aa-4.87□□□□□ -3.19
SNORA40.16-201ENST00000517238 CPSF1Q10570 1443 aaKnown RBP-4.88□□□□□ -3.19
SNORA40.16-201ENST00000517238 F6UZH7 168 aa-4.88□□□□□ -3.19
SNORA40.16-201ENST00000517238 DBIP07108 87 aaKnown RBP-4.88□□□□□ -3.19
SNORA40.16-201ENST00000517238 TPM4P67936 248 aa-4.88□□□□□ -3.19
SNORA40.16-201ENST00000517238 BOLA2Q9H3K6 86 aa-4.88□□□□□ -3.19
SNORA40.16-201ENST00000517238 TOP2BQ02880 1626 aa-4.89□□□□□ -3.19
SNORA40.16-201ENST00000517238 TMEM218A2RU14 115 aa-4.89□□□□□ -3.19
SNORA40.16-201ENST00000517238 CCDC58Q4VC31 144 aa-4.89□□□□□ -3.19
SNORA40.16-201ENST00000517238 MED14O60244 1454 aa-4.89□□□□□ -3.19
SNORA40.16-201ENST00000517238 EEA1Q15075 1411 aa-4.89□□□□□ -3.19
SNORA40.16-201ENST00000517238 ROBO1Q9Y6N7 1651 aa-4.89□□□□□ -3.19
SNORA40.16-201ENST00000517238 LRRC7Q96NW7 1537 aa-4.9□□□□□ -3.19
SNORA40.16-201ENST00000517238 TMEM35BQ8NCS4 154 aa-4.9□□□□□ -3.19
SNORA40.16-201ENST00000517238 PRAP1Q96NZ9 151 aa-4.9□□□□□ -3.19
SNORA40.16-201ENST00000517238 ANKRD36BQ8N2N9 1353 aa-4.91□□□□□ -3.19
SNORA40.16-201ENST00000517238 MYH4Q9Y623 1939 aa-4.91□□□□□ -3.2
SNORA40.16-201ENST00000517238 GUCA1AP43080 201 aaPredicted RBP-4.91□□□□□ -3.2
SNORA40.16-201ENST00000517238 GNG11P61952 73 aa-4.91□□□□□ -3.2
SNORA40.16-201ENST00000517238 CCL7P80098 99 aa-4.91□□□□□ -3.2
SNORA40.16-201ENST00000517238 KIAA0586Q9BVV6 1533 aa-4.92□□□□□ -3.2
SNORA40.16-201ENST00000517238 S100A9P06702 114 aaKnown RBP-4.92□□□□□ -3.2
SNORA40.16-201ENST00000517238 SCTP09683 121 aa-4.92□□□□□ -3.2
SNORA40.16-201ENST00000517238 HIGD1AQ9Y241 93 aa-4.92□□□□□ -3.2
SNORA40.16-201ENST00000517238 LRRIQ1Q96JM4 1722 aa-4.92□□□□□ -3.2
SNORA40.16-201ENST00000517238 ZC3H13Q5T200 1668 aaKnown RBP-4.92□□□□□ -3.2
SNORA40.16-201ENST00000517238 MIF4GDA9UHW6 222 aaKnown RBP-4.93□□□□□ -3.2
SNORA40.16-201ENST00000517238 SFTA3P0C7M3 94 aa-4.93□□□□□ -3.2
SNORA40.16-201ENST00000517238 PPP3R2Q96LZ3 170 aa-4.93□□□□□ -3.2
SNORA40.16-201ENST00000517238 CD163L1Q9NR16 1453 aa-4.94□□□□□ -3.2
SNORA40.16-201ENST00000517238 C20orf202A1L168 122 aa-4.94□□□□□ -3.2
SNORA40.16-201ENST00000517238 TMEM262E9PQX1 116 aa-4.94□□□□□ -3.2
SNORA40.16-201ENST00000517238 IGLC6P0CF74 106 aa-4.94□□□□□ -3.2
SNORA40.16-201ENST00000517238 KRTAP19-2Q3LHN2 52 aa-4.94□□□□□ -3.2
SNORA40.16-201ENST00000517238 ZNF436-AS1Q8NC38 126 aaPredicted RBP-4.94□□□□□ -3.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms