RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 LINC00518Q8N0U6 118 aa4.18□□□□□ -1.74
SCARNA18.2-201ENST00000516882 LINC00308Q8TCZ7 52 aa4.18□□□□□ -1.74
SCARNA18.2-201ENST00000516882 KRTAP4-16G5E9R7 235 aaPredicted RBP4.17□□□□□ -1.74
SCARNA18.2-201ENST00000516882 ZNF73O43830 326 aaPredicted RBP4.17□□□□□ -1.74
SCARNA18.2-201ENST00000516882 IGLV6-57P01721 117 aa4.17□□□□□ -1.74
SCARNA18.2-201ENST00000516882 SNRPEP62304 92 aaKnown RBP4.17□□□□□ -1.74
SCARNA18.2-201ENST00000516882 GAGE2AQ6NT46 116 aa4.17□□□□□ -1.74
SCARNA18.2-201ENST00000516882 SPAG11AQ6PDA7 123 aa4.17□□□□□ -1.74
SCARNA18.2-201ENST00000516882 SOSTDC1Q6X4U4 206 aa4.17□□□□□ -1.74
SCARNA18.2-201ENST00000516882 Q6ZRX8 168 aa4.17□□□□□ -1.74
SCARNA18.2-201ENST00000516882 HSBP1L1C9JCN9 74 aa4.16□□□□□ -1.74
SCARNA18.2-201ENST00000516882 ATOH7Q8N100 152 aa4.16□□□□□ -1.74
SCARNA18.2-201ENST00000516882 PPDPFQ9H3Y8 114 aa4.16□□□□□ -1.74
SCARNA18.2-201ENST00000516882 IFITM1P13164 125 aa4.15□□□□□ -1.75
SCARNA18.2-201ENST00000516882 Q6ZVH6 145 aa4.15□□□□□ -1.75
SCARNA18.2-201ENST00000516882 C3orf22Q8N5N4 141 aa4.15□□□□□ -1.75
SCARNA18.2-201ENST00000516882 LITAFQ99732 161 aa4.15□□□□□ -1.75
SCARNA18.2-201ENST00000516882 SPANXDQ9BXN6 97 aa4.15□□□□□ -1.75
SCARNA18.2-201ENST00000516882 TTTY13Q9BZ97 58 aa4.15□□□□□ -1.75
SCARNA18.2-201ENST00000516882 LRP2P98164 4655 aa4.15□□□□□ -1.75
SCARNA18.2-201ENST00000516882 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.75
SCARNA18.2-201ENST00000516882 IGLV9-49A0A0B4J1Y8 123 aa4.14□□□□□ -1.75
SCARNA18.2-201ENST00000516882 EIF4EBP3O60516 100 aaPredicted RBP4.14□□□□□ -1.75
SCARNA18.2-201ENST00000516882 LINC00483Q53H64 154 aa4.14□□□□□ -1.75
SCARNA18.2-201ENST00000516882 ANKRD39Q53RE8 183 aa4.14□□□□□ -1.75
SCARNA18.2-201ENST00000516882 Q9BRP9 147 aa4.14□□□□□ -1.75
SCARNA18.2-201ENST00000516882 C5orf52A6NGY3 159 aa4.13□□□□□ -1.75
SCARNA18.2-201ENST00000516882 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
SCARNA18.2-201ENST00000516882 SLC25A34Q6PIV7 304 aa4.13□□□□□ -1.75
SCARNA18.2-201ENST00000516882 HIST3H2BBQ8N257 126 aa4.13□□□□□ -1.75
SCARNA18.2-201ENST00000516882 Q8NBF4 154 aa4.13□□□□□ -1.75
SCARNA18.2-201ENST00000516882 HIST1H2BLQ99880 126 aa4.13□□□□□ -1.75
SCARNA18.2-201ENST00000516882 RETNLBQ9BQ08 111 aa4.13□□□□□ -1.75
SCARNA18.2-201ENST00000516882 DHRS4-AS1Q9P1J3 65 aa4.13□□□□□ -1.75
SCARNA18.2-201ENST00000516882 A6NDN8 102 aa4.12□□□□□ -1.75
SCARNA18.2-201ENST00000516882 SPINK1P00995 79 aa4.12□□□□□ -1.75
SCARNA18.2-201ENST00000516882 MOBPQ13875 183 aa4.12□□□□□ -1.75
SCARNA18.2-201ENST00000516882 C9orf153Q5TBE3 101 aa4.12□□□□□ -1.75
SCARNA18.2-201ENST00000516882 SSBP3-AS1Q7Z2R9 100 aa4.12□□□□□ -1.75
SCARNA18.2-201ENST00000516882 PCP2Q8IVA1 136 aa4.12□□□□□ -1.75
SCARNA18.2-201ENST00000516882 TRAV13-2A0A0B4J235 113 aa4.11□□□□□ -1.75
SCARNA18.2-201ENST00000516882 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
SCARNA18.2-201ENST00000516882 COX7BP24311 80 aa4.11□□□□□ -1.75
SCARNA18.2-201ENST00000516882 C6orf99Q4VX62 202 aa4.11□□□□□ -1.75
SCARNA18.2-201ENST00000516882 MUSTN1Q8IVN3 82 aa4.11□□□□□ -1.75
SCARNA18.2-201ENST00000516882 CDIP1Q9H305 208 aa4.11□□□□□ -1.75
SCARNA18.2-201ENST00000516882 IGLV7-46A0A075B6I9 117 aa4.1□□□□□ -1.75
SCARNA18.2-201ENST00000516882 TRBV7-6A0A0J9YX20 115 aa4.1□□□□□ -1.75
SCARNA18.2-201ENST00000516882 ELOF1P60002 83 aaKnown RBP4.1□□□□□ -1.75
SCARNA18.2-201ENST00000516882 TAL2Q16559 108 aa4.1□□□□□ -1.75
SCARNA18.2-201ENST00000516882 A0A1B0GWB2 263 aa4.09□□□□□ -1.75
SCARNA18.2-201ENST00000516882 A4D1N5 150 aa4.09□□□□□ -1.75
SCARNA18.2-201ENST00000516882 FP248Q71RG6 208 aaPredicted RBP4.09□□□□□ -1.75
SCARNA18.2-201ENST00000516882 ST20-AS1Q8NBB2 130 aa4.09□□□□□ -1.75
SCARNA18.2-201ENST00000516882 LAMTOR3Q9UHA4 124 aa4.09□□□□□ -1.75
SCARNA18.2-201ENST00000516882 LPAP08519 4548 aa4.09□□□□□ -1.76
SCARNA18.2-201ENST00000516882 SLC25A20O43772 301 aa4.08□□□□□ -1.76
SCARNA18.2-201ENST00000516882 RPS29P62273 56 aaKnown RBP4.08□□□□□ -1.76
SCARNA18.2-201ENST00000516882 VAMP3Q15836 100 aa4.08□□□□□ -1.76
SCARNA18.2-201ENST00000516882 TPRXLQ17RH7 258 aa4.08□□□□□ -1.76
SCARNA18.2-201ENST00000516882 NHP2Q9NX24 153 aaKnown RBP4.08□□□□□ -1.76
SCARNA18.2-201ENST00000516882 TEX49A0A1B0GTD5 131 aa4.07□□□□□ -1.76
SCARNA18.2-201ENST00000516882 DEFB105AQ8NG35 78 aa4.07□□□□□ -1.76
SCARNA18.2-201ENST00000516882 A0A0U1RQV1 116 aa4.06□□□□□ -1.76
SCARNA18.2-201ENST00000516882 SPRR1BP22528 89 aa4.06□□□□□ -1.76
SCARNA18.2-201ENST00000516882 SMIM11BQ8TCY0 68 aa4.06□□□□□ -1.76
SCARNA18.2-201ENST00000516882 HIST1H4GQ99525 98 aa4.06□□□□□ -1.76
SCARNA18.2-201ENST00000516882 LIMD2Q9BT23 127 aa4.06□□□□□ -1.76
SCARNA18.2-201ENST00000516882 COX8AP10176 69 aa4.05□□□□□ -1.76
SCARNA18.2-201ENST00000516882 Q1RN00 199 aa4.05□□□□□ -1.76
SCARNA18.2-201ENST00000516882 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
SCARNA18.2-201ENST00000516882 Q8N377 158 aa4.04□□□□□ -1.76
SCARNA18.2-201ENST00000516882 PRO1933Q9H354 126 aa4.04□□□□□ -1.76
SCARNA18.2-201ENST00000516882 F8WEM9 126 aa4.03□□□□□ -1.76
SCARNA18.2-201ENST00000516882 DLEU1O43261 78 aa4.03□□□□□ -1.76
SCARNA18.2-201ENST00000516882 SNCGO76070 127 aa4.03□□□□□ -1.76
SCARNA18.2-201ENST00000516882 BVES-AS1Q5T3Y7 98 aa4.03□□□□□ -1.76
SCARNA18.2-201ENST00000516882 HRCT1Q6UXD1 115 aa4.03□□□□□ -1.76
SCARNA18.2-201ENST00000516882 VAMP8Q9BV40 100 aa4.03□□□□□ -1.76
SCARNA18.2-201ENST00000516882 PAM16Q9Y3D7 125 aa4.03□□□□□ -1.76
SCARNA18.2-201ENST00000516882 IGLV5-48A0A075B6I7 105 aa4.02□□□□□ -1.77
SCARNA18.2-201ENST00000516882 hADV29S1A0JD25 119 aa4.02□□□□□ -1.77
SCARNA18.2-201ENST00000516882 H7C2G1 150 aa4.02□□□□□ -1.77
SCARNA18.2-201ENST00000516882 CD164Q04900 197 aa4.02□□□□□ -1.77
SCARNA18.2-201ENST00000516882 SPATA45Q537H7 98 aa4.02□□□□□ -1.77
SCARNA18.2-201ENST00000516882 RAB37Q96AX2 223 aa4.02□□□□□ -1.77
SCARNA18.2-201ENST00000516882 C14orf144Q96I85 54 aa4.02□□□□□ -1.77
SCARNA18.2-201ENST00000516882 C12orf57Q99622 126 aa4.02□□□□□ -1.77
SCARNA18.2-201ENST00000516882 LINC00575Q6W349 94 aa4.01□□□□□ -1.77
SCARNA18.2-201ENST00000516882 TMEM238LA0A1B0GVL6 79 aa4□□□□□ -1.77
SCARNA18.2-201ENST00000516882 A6NJY4 79 aa4□□□□□ -1.77
SCARNA18.2-201ENST00000516882 KRTAP13-3Q3SY46 172 aa4□□□□□ -1.77
SCARNA18.2-201ENST00000516882 HIGD1BQ9P298 99 aa4□□□□□ -1.77
SCARNA18.2-201ENST00000516882 LINC01547P58512 204 aaPredicted RBP3.99□□□□□ -1.77
SCARNA18.2-201ENST00000516882 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
SCARNA18.2-201ENST00000516882 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.99□□□□□ -1.77
SCARNA18.2-201ENST00000516882 Q6ZQY7 126 aa3.99□□□□□ -1.77
SCARNA18.2-201ENST00000516882 TCL1BO95988 128 aa3.98□□□□□ -1.77
SCARNA18.2-201ENST00000516882 CFC1BP0CG36 223 aa3.98□□□□□ -1.77
SCARNA18.2-201ENST00000516882 CFC1P0CG37 223 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms