RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 IFITM1P13164 125 aa6.59□□□□□ -1.35
SCARNA20-201ENST00000516768 FAM229BQ4G0N7 80 aa6.59□□□□□ -1.35
SCARNA20-201ENST00000516768 LINC00518Q8N0U6 118 aa6.59□□□□□ -1.35
SCARNA20-201ENST00000516768 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
SCARNA20-201ENST00000516768 SMCR5Q8TEV8 140 aa6.58□□□□□ -1.36
SCARNA20-201ENST00000516768 COPS9Q8WXC6 57 aa6.58□□□□□ -1.36
SCARNA20-201ENST00000516768 CBY1Q9Y3M2 126 aa6.58□□□□□ -1.36
SCARNA20-201ENST00000516768 TRAV23DV6A0A075B6W5 121 aa6.57□□□□□ -1.36
SCARNA20-201ENST00000516768 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
SCARNA20-201ENST00000516768 MUSTN1Q8IVN3 82 aa6.57□□□□□ -1.36
SCARNA20-201ENST00000516768 OR13C6PQ8NH95 151 aa6.57□□□□□ -1.36
SCARNA20-201ENST00000516768 TYMSOSQ8TAI1 123 aa6.57□□□□□ -1.36
SCARNA20-201ENST00000516768 ZNF73O43830 326 aaPredicted RBP6.56□□□□□ -1.36
SCARNA20-201ENST00000516768 Q6ZRX8 168 aa6.56□□□□□ -1.36
SCARNA20-201ENST00000516768 SPRR4Q96PI1 79 aa6.56□□□□□ -1.36
SCARNA20-201ENST00000516768 Q9BRP9 147 aa6.55□□□□□ -1.36
SCARNA20-201ENST00000516768 HMCN2Q8NDA2 5059 aa6.54□□□□□ -1.36
SCARNA20-201ENST00000516768 ERC2-IT1O76042 136 aa6.54□□□□□ -1.36
SCARNA20-201ENST00000516768 HINT1P49773 126 aaPredicted RBP6.54□□□□□ -1.36
SCARNA20-201ENST00000516768 JOSD1Q15040 202 aaPredicted RBP6.54□□□□□ -1.36
SCARNA20-201ENST00000516768 ZNF706Q9Y5V0 76 aaPredicted RBP6.54□□□□□ -1.36
SCARNA20-201ENST00000516768 COX8AP10176 69 aa6.52□□□□□ -1.37
SCARNA20-201ENST00000516768 DLEU1O43261 78 aa6.51□□□□□ -1.37
SCARNA20-201ENST00000516768 LINC00483Q53H64 154 aa6.51□□□□□ -1.37
SCARNA20-201ENST00000516768 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
SCARNA20-201ENST00000516768 A6NDN8 102 aa6.5□□□□□ -1.37
SCARNA20-201ENST00000516768 TSPAN13O95857 204 aa6.5□□□□□ -1.37
SCARNA20-201ENST00000516768 GAGE2AQ6NT46 116 aa6.5□□□□□ -1.37
SCARNA20-201ENST00000516768 C3orf22Q8N5N4 141 aa6.5□□□□□ -1.37
SCARNA20-201ENST00000516768 TRAV13-2A0A0B4J235 113 aa6.49□□□□□ -1.37
SCARNA20-201ENST00000516768 TRBV7-6A0A0J9YX20 115 aa6.49□□□□□ -1.37
SCARNA20-201ENST00000516768 CTAG1AP78358 180 aa6.49□□□□□ -1.37
SCARNA20-201ENST00000516768 C6orf99Q4VX62 202 aa6.49□□□□□ -1.37
SCARNA20-201ENST00000516768 C14orf144Q96I85 54 aa6.49□□□□□ -1.37
SCARNA20-201ENST00000516768 ELOF1P60002 83 aaKnown RBP6.48□□□□□ -1.37
SCARNA20-201ENST00000516768 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
SCARNA20-201ENST00000516768 DHRS4-AS1Q9P1J3 65 aa6.48□□□□□ -1.37
SCARNA20-201ENST00000516768 PAM16Q9Y3D7 125 aa6.48□□□□□ -1.37
SCARNA20-201ENST00000516768 A4D1N5 150 aa6.47□□□□□ -1.37
SCARNA20-201ENST00000516768 COX7BP24311 80 aa6.47□□□□□ -1.37
SCARNA20-201ENST00000516768 SPATA45Q537H7 98 aa6.47□□□□□ -1.37
SCARNA20-201ENST00000516768 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
SCARNA20-201ENST00000516768 VAMP8Q9BV40 100 aa6.47□□□□□ -1.37
SCARNA20-201ENST00000516768 SPAG11AQ6PDA7 123 aa6.46□□□□□ -1.38
SCARNA20-201ENST00000516768 ST20-AS1Q8NBB2 130 aa6.46□□□□□ -1.38
SCARNA20-201ENST00000516768 SMIM11BQ8TCY0 68 aa6.46□□□□□ -1.38
SCARNA20-201ENST00000516768 A0A1B0GWB2 263 aa6.45□□□□□ -1.38
SCARNA20-201ENST00000516768 PYY3Q5JQD4 70 aa6.45□□□□□ -1.38
SCARNA20-201ENST00000516768 SLC25A34Q6PIV7 304 aa6.45□□□□□ -1.38
SCARNA20-201ENST00000516768 SSBP3-AS1Q7Z2R9 100 aa6.45□□□□□ -1.38
SCARNA20-201ENST00000516768 HIGD1BQ9P298 99 aa6.45□□□□□ -1.38
SCARNA20-201ENST00000516768 SPRR1BP22528 89 aa6.44□□□□□ -1.38
SCARNA20-201ENST00000516768 PRR4Q16378 134 aa6.43□□□□□ -1.38
SCARNA20-201ENST00000516768 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
SCARNA20-201ENST00000516768 IGLV9-49A0A0B4J1Y8 123 aa6.42□□□□□ -1.38
SCARNA20-201ENST00000516768 VAMP3Q15836 100 aa6.42□□□□□ -1.38
SCARNA20-201ENST00000516768 Q8NBF4 154 aa6.42□□□□□ -1.38
SCARNA20-201ENST00000516768 MOBPQ13875 183 aa6.41□□□□□ -1.38
SCARNA20-201ENST00000516768 TAL2Q16559 108 aa6.41□□□□□ -1.38
SCARNA20-201ENST00000516768 C2orf91Q6ZV80 131 aa6.41□□□□□ -1.38
SCARNA20-201ENST00000516768 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
SCARNA20-201ENST00000516768 SPINK1P00995 79 aa6.4□□□□□ -1.38
SCARNA20-201ENST00000516768 CFC1BP0CG36 223 aa6.4□□□□□ -1.38
SCARNA20-201ENST00000516768 CFC1P0CG37 223 aa6.4□□□□□ -1.38
SCARNA20-201ENST00000516768 LRP2P98164 4655 aa6.4□□□□□ -1.39
SCARNA20-201ENST00000516768 TEX49A0A1B0GTD5 131 aa6.39□□□□□ -1.39
SCARNA20-201ENST00000516768 DEFB105AQ8NG35 78 aa6.39□□□□□ -1.39
SCARNA20-201ENST00000516768 C12orf57Q99622 126 aa6.39□□□□□ -1.39
SCARNA20-201ENST00000516768 LINC01547P58512 204 aaPredicted RBP6.38□□□□□ -1.39
SCARNA20-201ENST00000516768 LINC00575Q6W349 94 aa6.38□□□□□ -1.39
SCARNA20-201ENST00000516768 CEND1Q8N111 149 aa6.38□□□□□ -1.39
SCARNA20-201ENST00000516768 NHP2Q9NX24 153 aaKnown RBP6.38□□□□□ -1.39
SCARNA20-201ENST00000516768 LAMTOR3Q9UHA4 124 aa6.38□□□□□ -1.39
SCARNA20-201ENST00000516768 IGLV5-48A0A075B6I7 105 aa6.37□□□□□ -1.39
SCARNA20-201ENST00000516768 SLC25A20O43772 301 aa6.37□□□□□ -1.39
SCARNA20-201ENST00000516768 RETNLBQ9BQ08 111 aa6.37□□□□□ -1.39
SCARNA20-201ENST00000516768 RPS29P62273 56 aaKnown RBP6.36□□□□□ -1.39
SCARNA20-201ENST00000516768 BVES-AS1Q5T3Y7 98 aa6.36□□□□□ -1.39
SCARNA20-201ENST00000516768 C9orf153Q5TBE3 101 aa6.36□□□□□ -1.39
SCARNA20-201ENST00000516768 SMIM29Q86T20 159 aa6.36□□□□□ -1.39
SCARNA20-201ENST00000516768 A0A0B4J2C4 111 aa6.35□□□□□ -1.39
SCARNA20-201ENST00000516768 hADV29S1A0JD25 119 aa6.35□□□□□ -1.39
SCARNA20-201ENST00000516768 Q8N377 158 aa6.35□□□□□ -1.39
SCARNA20-201ENST00000516768 RAB37Q96AX2 223 aa6.35□□□□□ -1.39
SCARNA20-201ENST00000516768 Q1RN00 199 aa6.34□□□□□ -1.39
SCARNA20-201ENST00000516768 IGLV7-46A0A075B6I9 117 aa6.33□□□□□ -1.4
SCARNA20-201ENST00000516768 LOC105371267A0A1B0GV96 52 aa6.33□□□□□ -1.4
SCARNA20-201ENST00000516768 TMEM238LA0A1B0GVL6 79 aa6.33□□□□□ -1.4
SCARNA20-201ENST00000516768 A6NJY4 79 aa6.33□□□□□ -1.4
SCARNA20-201ENST00000516768 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
SCARNA20-201ENST00000516768 LPAP08519 4548 aa6.32□□□□□ -1.4
SCARNA20-201ENST00000516768 H7C2G1 150 aa6.32□□□□□ -1.4
SCARNA20-201ENST00000516768 FXYD2P54710 66 aa6.32□□□□□ -1.4
SCARNA20-201ENST00000516768 UQCR10Q9UDW1 63 aa6.32□□□□□ -1.4
SCARNA20-201ENST00000516768 H0YGX0 51 aa6.31□□□□□ -1.4
SCARNA20-201ENST00000516768 HSD52Q0P140 79 aa6.31□□□□□ -1.4
SCARNA20-201ENST00000516768 Q6ZQY7 126 aa6.31□□□□□ -1.4
SCARNA20-201ENST00000516768 FP248Q71RG6 208 aaPredicted RBP6.31□□□□□ -1.4
SCARNA20-201ENST00000516768 PRO1933Q9H354 126 aa6.31□□□□□ -1.4
SCARNA20-201ENST00000516768 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms