RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 IGHV1-58A0A0C4DH39 117 aa3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 IGKV3OR2-268A0A0C4DH90 116 aa3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 LOC107984640A0A0U1RRK4 108 aa3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 SMCPP49901 116 aaPredicted RBP3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 RPL36AP83881 106 aaKnown RBP3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 GAGE6Q13070 117 aa3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 PCOTHQ58A44 107 aa3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 ADAMTSL4-AS1Q5T5F5 129 aa3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 DAND5Q8N907 189 aa3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 RPL36ALQ969Q0 106 aaKnown RBP3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 LITAFQ99732 161 aa3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 CDKN2A-AS1Q9UH64 79 aa3.13□□□□□ -1.91
SCARNA21.2-201ENST00000516600 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 TRAV13-1A0A0B4J241 112 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 A0A0U1RRA0 63 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 TMEM238LA0A1B0GVL6 79 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 A6NJY4 79 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 TMEM238C9JI98 176 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 TCL1BO95988 128 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 LINC00242Q5T6M2 205 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 KRTAP11-1Q8IUC1 163 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 ZNF625Q96I27 306 aaPredicted RBP3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 TMEM101Q96IK0 257 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 GEMIN7Q9H840 131 aaKnown RBP3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 NDUFA12Q9UI09 145 aa3.12□□□□□ -1.91
SCARNA21.2-201ENST00000516600 TRBV10-1A0A0K0K1A3 114 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 GAGE12HA6NDE8 117 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 K7ERU9 68 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 UBE2L6O14933 153 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 ZNF861PO60384 105 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 SCGB1C2P0DMR2 95 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 PCP4P48539 62 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 UBE2BP63146 152 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 Q1RN00 199 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 ETDBQ3ZM63 59 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 KRTAP13-2Q52LG2 175 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 SPANXDQ9BXN6 97 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 SPANXCQ9NY87 97 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 PRO1854Q9UHT4 67 aa3.11□□□□□ -1.91
SCARNA21.2-201ENST00000516600 IGLV4-60A0A075B6I1 120 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 IGLV5-45A0A087WSX0 123 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 A0A0B4J2C4 111 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 SMIM1B2RUZ4 78 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 F8W1H4 67 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 NDUFA1O15239 70 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 PRSS2P07478 247 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 HERVK_113P63121 156 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 CDC42SE2Q9NRR3 84 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 ERG28Q9UKR5 140 aa3.1□□□□□ -1.91
SCARNA21.2-201ENST00000516600 IGLV5-39A0A0G2JS06 123 aa3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 TRIAP1O43715 76 aa3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 RPL18AQ02543 176 aaKnown RBP3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 SYCNQ0VAF6 134 aa3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 MEIG1Q5JSS6 88 aa3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 SOSTDC1Q6X4U4 206 aa3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 FAM19A3Q7Z5A8 133 aa3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 LINC00526Q96FQ7 95 aa3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 ANAPC11Q9NYG5 84 aa3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 TOMM7Q9P0U1 55 aa3.09□□□□□ -1.91
SCARNA21.2-201ENST00000516600 C9JAW5 83 aa3.08□□□□□ -1.92
SCARNA21.2-201ENST00000516600 FOXI1Q12951 378 aa3.08□□□□□ -1.92
SCARNA21.2-201ENST00000516600 C5orf38Q86SI9 138 aa3.08□□□□□ -1.92
SCARNA21.2-201ENST00000516600 ANKRD29Q8N6D5 301 aa3.08□□□□□ -1.92
SCARNA21.2-201ENST00000516600 LINC00308Q8TCZ7 52 aa3.08□□□□□ -1.92
SCARNA21.2-201ENST00000516600 CLEC2BQ92478 149 aa3.08□□□□□ -1.92
SCARNA21.2-201ENST00000516600 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
SCARNA21.2-201ENST00000516600 TIMM17BO60830 172 aa3.07□□□□□ -1.92
SCARNA21.2-201ENST00000516600 LYRM7Q5U5X0 104 aa3.07□□□□□ -1.92
SCARNA21.2-201ENST00000516600 COX7B2Q8TF08 81 aa3.07□□□□□ -1.92
SCARNA21.2-201ENST00000516600 CSDC2Q9Y534 153 aaKnown RBP3.07□□□□□ -1.92
SCARNA21.2-201ENST00000516600 TRBV20-1A0A075B6N2 111 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 TRBV30A0A0K0K1B3 111 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 LINC00959A0A1B0GUT2 108 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 H7C423 109 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 ZNF561-AS1K7EIQ3 104 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 SLC25A20O43772 301 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 MT2AP02795 61 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 IFITM1P13164 125 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 SMAGPQ0VAQ4 97 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 ATXN8Q156A1 80 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 FAM19A5Q7Z5A7 132 aaPredicted RBP3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 PPDPFLQ8WWR9 84 aa3.06□□□□□ -1.92
SCARNA21.2-201ENST00000516600 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
SCARNA21.2-201ENST00000516600 PFN2P35080 140 aa3.05□□□□□ -1.92
SCARNA21.2-201ENST00000516600 XCL1P47992 114 aa3.05□□□□□ -1.92
SCARNA21.2-201ENST00000516600 FAM229BQ4G0N7 80 aa3.05□□□□□ -1.92
SCARNA21.2-201ENST00000516600 SPAG11AQ6PDA7 123 aa3.05□□□□□ -1.92
SCARNA21.2-201ENST00000516600 TEN1Q86WV5 123 aa3.05□□□□□ -1.92
SCARNA21.2-201ENST00000516600 MIR7-3HGQ8N6C7 128 aa3.05□□□□□ -1.92
SCARNA21.2-201ENST00000516600 IGHV3OR16-9A0A0B4J2B5 98 aa3.04□□□□□ -1.92
SCARNA21.2-201ENST00000516600 TRBV10-2A0A0K0K1G8 114 aa3.04□□□□□ -1.92
SCARNA21.2-201ENST00000516600 J3QR89 54 aa3.04□□□□□ -1.92
SCARNA21.2-201ENST00000516600 M0QXV9 152 aa3.04□□□□□ -1.92
SCARNA21.2-201ENST00000516600 MT-ATP8P03928 68 aa3.04□□□□□ -1.92
SCARNA21.2-201ENST00000516600 MT1FP04733 61 aa3.04□□□□□ -1.92
SCARNA21.2-201ENST00000516600 RPL28P46779 137 aaKnown RBP3.04□□□□□ -1.92
SCARNA21.2-201ENST00000516600 LINC00158P58513 81 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms