RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 TRAPPC2P0DI81 140 aa-5.38□□□□□ -3.27
SNORA40.13-201ENST00000516379 TRAPPC2BP0DI82 140 aa-5.38□□□□□ -3.27
SNORA40.13-201ENST00000516379 COMMD6Q7Z4G1 85 aa-5.38□□□□□ -3.27
SNORA40.13-201ENST00000516379 C7orf77A4D0Y5 90 aa-5.39□□□□□ -3.27
SNORA40.13-201ENST00000516379 SMIM21Q3B7S5 101 aa-5.39□□□□□ -3.27
SNORA40.13-201ENST00000516379 COX6CP09669 75 aa-5.4□□□□□ -3.27
SNORA40.13-201ENST00000516379 DPH3Q96FX2 82 aa-5.4□□□□□ -3.27
SNORA40.13-201ENST00000516379 CFTRP13569 1480 aa-5.4□□□□□ -3.27
SNORA40.13-201ENST00000516379 PRDM15P57071 1507 aaPredicted RBP-5.41□□□□□ -3.28
SNORA40.13-201ENST00000516379 IGLV5-48A0A075B6I7 105 aa-5.42□□□□□ -3.28
SNORA40.13-201ENST00000516379 S100GP29377 79 aa-5.42□□□□□ -3.28
SNORA40.13-201ENST00000516379 MANBALQ9NQG1 85 aa-5.42□□□□□ -3.28
SNORA40.13-201ENST00000516379 ROBO1Q9Y6N7 1651 aa-5.43□□□□□ -3.28
SNORA40.13-201ENST00000516379 LRRC9Q6ZRR7 1453 aa-5.43□□□□□ -3.28
SNORA40.13-201ENST00000516379 DBIP07108 87 aaKnown RBP-5.43□□□□□ -3.28
SNORA40.13-201ENST00000516379 Q0VG73 95 aa-5.43□□□□□ -3.28
SNORA40.13-201ENST00000516379 CCDC153Q494R4 210 aa-5.43□□□□□ -3.28
SNORA40.13-201ENST00000516379 Q56UQ5 140 aa-5.43□□□□□ -3.28
SNORA40.13-201ENST00000516379 SKA2Q8WVK7 121 aaPredicted RBP-5.43□□□□□ -3.28
SNORA40.13-201ENST00000516379 C12orf57Q99622 126 aa-5.43□□□□□ -3.28
SNORA40.13-201ENST00000516379 AP4S1Q9Y587 144 aa-5.43□□□□□ -3.28
SNORA40.13-201ENST00000516379 LYNX1G3V0Z9 82 aa-5.44□□□□□ -3.28
SNORA40.13-201ENST00000516379 PPP3R2Q96LZ3 170 aa-5.44□□□□□ -3.28
SNORA40.13-201ENST00000516379 IAPPP10997 89 aa-5.45□□□□□ -3.28
SNORA40.13-201ENST00000516379 COX7BP24311 80 aa-5.45□□□□□ -3.28
SNORA40.13-201ENST00000516379 SERP2Q8N6R1 65 aa-5.45□□□□□ -3.28
SNORA40.13-201ENST00000516379 SERP1Q9Y6X1 66 aa-5.45□□□□□ -3.28
SNORA40.13-201ENST00000516379 LINC01546A6NGU7 62 aa-5.46□□□□□ -3.28
SNORA40.13-201ENST00000516379 J3QR89 54 aa-5.46□□□□□ -3.28
SNORA40.13-201ENST00000516379 K7EP13 123 aa-5.46□□□□□ -3.28
SNORA40.13-201ENST00000516379 RERGLQ9H628 205 aa-5.46□□□□□ -3.28
SNORA40.13-201ENST00000516379 SMPXQ9UHP9 88 aa-5.46□□□□□ -3.28
SNORA40.13-201ENST00000516379 TIMM8BQ9Y5J9 83 aaPredicted RBP-5.46□□□□□ -3.28
SNORA40.13-201ENST00000516379 CEP350Q5VT06 3117 aa-5.47□□□□□ -3.28
SNORA40.13-201ENST00000516379 F6UZH7 168 aa-5.47□□□□□ -3.29
SNORA40.13-201ENST00000516379 SCGB1A1P11684 91 aa-5.47□□□□□ -3.29
SNORA40.13-201ENST00000516379 TCEAL4Q96EI5 215 aa-5.47□□□□□ -3.29
SNORA40.13-201ENST00000516379 PRO1854Q9UHT4 67 aa-5.47□□□□□ -3.29
SNORA40.13-201ENST00000516379 K7ERU9 68 aa-5.48□□□□□ -3.29
SNORA40.13-201ENST00000516379 SPANXCQ9NY87 97 aa-5.48□□□□□ -3.29
SNORA40.13-201ENST00000516379 LY75O60449 1722 aa-5.48□□□□□ -3.29
SNORA40.13-201ENST00000516379 PARP4Q9UKK3 1724 aaKnown RBP-5.48□□□□□ -3.29
SNORA40.13-201ENST00000516379 PDCD10Q9BUL8 212 aa-5.49□□□□□ -3.29
SNORA40.13-201ENST00000516379 SMIM3Q9BZL3 60 aa-5.49□□□□□ -3.29
SNORA40.13-201ENST00000516379 FAM135AQ9P2D6 1515 aa-5.49□□□□□ -3.29
SNORA40.13-201ENST00000516379 PKD1L3Q7Z443 1732 aa-5.5□□□□□ -3.29
SNORA40.13-201ENST00000516379 RPL38P63173 70 aaKnown RBP-5.5□□□□□ -3.29
SNORA40.13-201ENST00000516379 CDC26Q8NHZ8 85 aa-5.5□□□□□ -3.29
SNORA40.13-201ENST00000516379 NESP48681 1621 aa-5.5□□□□□ -3.29
SNORA40.13-201ENST00000516379 FRYLO94915 3013 aa-5.51□□□□□ -3.29
SNORA40.13-201ENST00000516379 F8WEM9 126 aa-5.51□□□□□ -3.29
SNORA40.13-201ENST00000516379 IGLC2P0DOY2 106 aa-5.51□□□□□ -3.29
SNORA40.13-201ENST00000516379 IGLC3P0DOY3 106 aa-5.51□□□□□ -3.29
SNORA40.13-201ENST00000516379 SMCO1Q147U7 214 aa-5.51□□□□□ -3.29
SNORA40.13-201ENST00000516379 GRIN2AQ12879 1464 aa-5.51□□□□□ -3.29
SNORA40.13-201ENST00000516379 GNG11P61952 73 aa-5.52□□□□□ -3.29
SNORA40.13-201ENST00000516379 COPS9Q8WXC6 57 aa-5.52□□□□□ -3.29
SNORA40.13-201ENST00000516379 VAMP8Q9BV40 100 aa-5.52□□□□□ -3.29
SNORA40.13-201ENST00000516379 FHAD1B1AJZ9 1412 aa-5.52□□□□□ -3.29
SNORA40.13-201ENST00000516379 MAST1Q9Y2H9 1570 aa-5.52□□□□□ -3.29
SNORA40.13-201ENST00000516379 A0A1B0GV72 72 aa-5.53□□□□□ -3.29
SNORA40.13-201ENST00000516379 C8orf59Q8N0T1 100 aaPredicted RBP-5.53□□□□□ -3.29
SNORA40.13-201ENST00000516379 GINS2Q9Y248 185 aa-5.53□□□□□ -3.29
SNORA40.13-201ENST00000516379 IFI6P09912 130 aa-5.54□□□□□ -3.3
SNORA40.13-201ENST00000516379 RPS29P62273 56 aaKnown RBP-5.54□□□□□ -3.3
SNORA40.13-201ENST00000516379 CCDC167Q9P0B6 97 aa-5.54□□□□□ -3.3
SNORA40.13-201ENST00000516379 HSPB11Q9Y547 144 aa-5.54□□□□□ -3.3
SNORA40.13-201ENST00000516379 PCNTO95613 3336 aa-5.54□□□□□ -3.3
SNORA40.13-201ENST00000516379 M0R2Z0 102 aa-5.56□□□□□ -3.3
SNORA40.13-201ENST00000516379 SMARCA2P51531 1590 aa-5.56□□□□□ -3.3
SNORA40.13-201ENST00000516379 G0S2P27469 103 aa-5.57□□□□□ -3.3
SNORA40.13-201ENST00000516379 MIF4GDA9UHW6 222 aaKnown RBP-5.58□□□□□ -3.3
SNORA40.13-201ENST00000516379 TRGV9Q99603 122 aa-5.58□□□□□ -3.3
SNORA40.13-201ENST00000516379 GSKIPQ9P0R6 139 aa-5.59□□□□□ -3.3
SNORA40.13-201ENST00000516379 TEX14Q8IWB6 1497 aa-5.59□□□□□ -3.3
SNORA40.13-201ENST00000516379 TSTD3H0UI37 97 aa-5.6□□□□□ -3.31
SNORA40.13-201ENST00000516379 COPZ1P61923 177 aa-5.6□□□□□ -3.31
SNORA40.13-201ENST00000516379 CHMP6Q96FZ7 201 aa-5.6□□□□□ -3.31
SNORA40.13-201ENST00000516379 CATR1Q13166 79 aa-5.62□□□□□ -3.31
SNORA40.13-201ENST00000516379 DDA1Q9BW61 102 aa-5.62□□□□□ -3.31
SNORA40.13-201ENST00000516379 GNG10P50151 68 aa-5.63□□□□□ -3.31
SNORA40.13-201ENST00000516379 E5RI56 91 aa-5.64□□□□□ -3.31
SNORA40.13-201ENST00000516379 TMEM262E9PQX1 116 aa-5.64□□□□□ -3.31
SNORA40.13-201ENST00000516379 RPS25P62851 125 aaKnown RBP-5.64□□□□□ -3.31
SNORA40.13-201ENST00000516379 ANP32BQ92688 251 aaKnown RBP-5.64□□□□□ -3.31
SNORA40.13-201ENST00000516379 CENPHQ9H3R5 247 aa-5.64□□□□□ -3.31
SNORA40.13-201ENST00000516379 NWD1Q149M9 1564 aa-5.64□□□□□ -3.31
SNORA40.13-201ENST00000516379 MYH4Q9Y623 1939 aa-5.64□□□□□ -3.31
SNORA40.13-201ENST00000516379 SCAPERQ9BY12 1400 aa-5.65□□□□□ -3.31
SNORA40.13-201ENST00000516379 LRRC7Q96NW7 1537 aa-5.65□□□□□ -3.31
SNORA40.13-201ENST00000516379 RGPD1P0DJD0 1748 aa-5.65□□□□□ -3.31
SNORA40.13-201ENST00000516379 SPANXA1Q9NS26 97 aa-5.66□□□□□ -3.32
SNORA40.13-201ENST00000516379 SZT2Q5T011 3432 aa-5.66□□□□□ -3.32
SNORA40.13-201ENST00000516379 EIF4G3O43432 1585 aaKnown RBP-5.67□□□□□ -3.32
SNORA40.13-201ENST00000516379 CGREF1Q99674 301 aa-5.67□□□□□ -3.32
SNORA40.13-201ENST00000516379 SUPT6HQ7KZ85 1726 aaKnown RBP-5.68□□□□□ -3.32
SNORA40.13-201ENST00000516379 NAP1L6A6NFF2 107 aa-5.68□□□□□ -3.32
SNORA40.13-201ENST00000516379 WT1-ASQ06250 92 aa-5.68□□□□□ -3.32
SNORA40.13-201ENST00000516379 C1orf54Q8WWF1 131 aa-5.68□□□□□ -3.32
SNORA40.13-201ENST00000516379 ITSN2Q9NZM3 1697 aa-5.69□□□□□ -3.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms