RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 LINC00694P0DN24 101 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 IGLC2P0DOY2 106 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 PKIAP61925 76 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 LINC01556Q5JQF7 62 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 LINC00269Q8N2A0 174 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 TOMM5Q8N4H5 51 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 OR10AG1Q8NH19 301 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 ATP6V0E2Q8NHE4 81 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 DPH3P1Q9H4G8 78 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 PSENENQ9NZ42 101 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 TMEM14CQ9P0S9 112 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 STAB2Q8WWQ8 2551 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 DNAH7Q8WXX0 4024 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 DYNC1H1Q14204 4646 aaKnown RBP1.34□□□□□ -2.19
HERC4-215ENST00000515753 KIAA1109Q2LD37 5005 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 TRBV6-8A0A0A6YYG3 113 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 TRAV21A0A0B4J279 112 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 TRBV6-4A0A1B0GX49 114 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 K7ERU9 68 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 M0R2P5 195 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 SMR3BP02814 79 aaPredicted RBP1.34□□□□□ -2.19
HERC4-215ENST00000515753 IAPPP10997 89 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 RNASE3P12724 160 aaKnown RBP1.34□□□□□ -2.19
HERC4-215ENST00000515753 CKS2P33552 79 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 DEFB1P60022 68 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 Q0VG73 95 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 RHOHQ15669 191 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 LELP1Q5T871 98 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 TEX261Q6UWH6 196 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 Q6ZSA8 131 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 AGPAT4-IT1Q9H0P7 198 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 MED9Q9NWA0 146 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 TNFSF18Q9UNG2 199 aa1.34□□□□□ -2.19
HERC4-215ENST00000515753 VPS13DQ5THJ4 4388 aa1.34□□□□□ -2.2
HERC4-215ENST00000515753 C9orf170A2RU37 121 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 CCDC160A6NGH7 325 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 H3BQ15 152 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 SSSCA1O60232 199 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 KRTAP13-4Q3LI77 160 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 Q6AWC8 147 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 WFDC10BQ8IUB3 73 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 ATOH7Q8N100 152 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 ORMDL1Q9P0S3 153 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 DNAH10Q8IVF4 4471 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 LYSTQ99698 3801 aa1.33□□□□□ -2.2
HERC4-215ENST00000515753 RYR1P21817 5038 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 COL7A1Q02388 2944 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 TRBV10-1A0A0K0K1A3 114 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 M0R3E3 92 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 NDUFB6O95139 128 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 IGHV3-33P01772 117 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 COX7CP15954 63 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 S100A10P60903 97 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 RPL37AP61513 92 aaKnown RBP1.32□□□□□ -2.2
HERC4-215ENST00000515753 RRAS2P62070 204 aaPredicted RBP1.32□□□□□ -2.2
HERC4-215ENST00000515753 MIR22HGQ0VDD5 57 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.32□□□□□ -2.2
HERC4-215ENST00000515753 CASC2Q6XLA1 102 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 FAM19A2Q8N3H0 131 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 Q8TAT8 98 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 DPH3Q96FX2 82 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 MGST2Q99735 147 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 SMIM7Q9BQ49 75 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 NMES1Q9C002 83 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 CYSTM1Q9H1C7 97 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 KMT2AQ03164 3969 aa1.32□□□□□ -2.2
HERC4-215ENST00000515753 FAT2Q9NYQ8 4349 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 DNAH2Q9P225 4427 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 TRBV20-1A0A075B6N2 111 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 IGHV1-24A0A0C4DH33 117 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 TMEM262E9PQX1 116 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 F6UZH7 168 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 F8W1H4 67 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 NUPR1O60356 82 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 IGHV3-30P01768 117 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 IGHV3-30-5P0DP03 117 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 FGF7P21781 194 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 UBE2L3P68036 154 aaKnown RBP1.31□□□□□ -2.2
HERC4-215ENST00000515753 CFAP126Q5VTH2 177 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 MIC13Q5XKP0 118 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 TMEM191AQ9H0A3 160 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 TMEM167BQ9NRX6 74 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 LINC00474Q9P2X8 69 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 SNURFQ9Y675 71 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 HECTD4Q9Y4D8 3996 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 HSPG2P98160 4391 aa1.31□□□□□ -2.2
HERC4-215ENST00000515753 LRP1BQ9NZR2 4599 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 TNCP24821 2201 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 CSMD3Q7Z407 3707 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 TRBV7-3A0A075B6L6 115 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 IGKV2-40A0A087WW87 121 aaPredicted RBP1.3□□□□□ -2.2
HERC4-215ENST00000515753 FAM236AA0A1B0GUQ0 79 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 UBE2L5PA0A1B0GUS4 154 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 FAM236BA0A1B0GV22 79 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 FAM24AA6NFZ4 105 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 DLEU1O43261 78 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 IGKV2D-40P01614 121 aaPredicted RBP1.3□□□□□ -2.2
HERC4-215ENST00000515753 SFTA3P0C7M3 94 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 PYYP10082 97 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 ASIPP42127 132 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms