RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 SMCO4Q9NRQ5 59 aa5.45□□□□□ -1.54
CLDND1-231ENST00000515620 JOSD1Q15040 202 aaPredicted RBP5.44□□□□□ -1.54
CLDND1-231ENST00000515620 C1orf195Q5TG92 126 aa5.43□□□□□ -1.54
CLDND1-231ENST00000515620 CHTOPQ9Y3Y2 248 aaKnown RBP5.43□□□□□ -1.54
CLDND1-231ENST00000515620 A0A096LNJ9 63 aa5.42□□□□□ -1.54
CLDND1-231ENST00000515620 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
CLDND1-231ENST00000515620 MT2AP02795 61 aa5.42□□□□□ -1.54
CLDND1-231ENST00000515620 BAGE3Q86Y29 109 aa5.42□□□□□ -1.54
CLDND1-231ENST00000515620 TRAV23DV6A0A075B6W5 121 aa5.41□□□□□ -1.54
CLDND1-231ENST00000515620 TRBV10-2A0A0K0K1G8 114 aa5.41□□□□□ -1.54
CLDND1-231ENST00000515620 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
CLDND1-231ENST00000515620 TMEM223A0PJW6 202 aa5.4□□□□□ -1.54
CLDND1-231ENST00000515620 HERV-K104P63124 156 aa5.4□□□□□ -1.54
CLDND1-231ENST00000515620 CD164Q04900 197 aa5.4□□□□□ -1.54
CLDND1-231ENST00000515620 S100A7L2Q5SY68 101 aa5.4□□□□□ -1.54
CLDND1-231ENST00000515620 SLC25A34Q6PIV7 304 aa5.4□□□□□ -1.54
CLDND1-231ENST00000515620 LAMTOR3Q9UHA4 124 aa5.4□□□□□ -1.54
CLDND1-231ENST00000515620 C5orf52A6NGY3 159 aa5.39□□□□□ -1.55
CLDND1-231ENST00000515620 ZNF73O43830 326 aaPredicted RBP5.39□□□□□ -1.55
CLDND1-231ENST00000515620 SPRR1BP22528 89 aa5.39□□□□□ -1.55
CLDND1-231ENST00000515620 MAP1LC3CQ9BXW4 147 aa5.39□□□□□ -1.55
CLDND1-231ENST00000515620 SPANXB1Q9NS25 103 aaPredicted RBP5.39□□□□□ -1.55
CLDND1-231ENST00000515620 LINC00587B1AMM8 73 aa5.38□□□□□ -1.55
CLDND1-231ENST00000515620 HBDP02042 147 aa5.38□□□□□ -1.55
CLDND1-231ENST00000515620 MT1FP04733 61 aa5.38□□□□□ -1.55
CLDND1-231ENST00000515620 PMCHL1Q16048 86 aa5.38□□□□□ -1.55
CLDND1-231ENST00000515620 Q5XG85 94 aa5.38□□□□□ -1.55
CLDND1-231ENST00000515620 Q1RN00 199 aa5.37□□□□□ -1.55
CLDND1-231ENST00000515620 SMIM29Q86T20 159 aa5.37□□□□□ -1.55
CLDND1-231ENST00000515620 PRO1933Q9H354 126 aa5.37□□□□□ -1.55
CLDND1-231ENST00000515620 LOC107984156A0A0G2JMH3 177 aa5.36□□□□□ -1.55
CLDND1-231ENST00000515620 C20orf202A1L168 122 aa5.36□□□□□ -1.55
CLDND1-231ENST00000515620 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
CLDND1-231ENST00000515620 ATP11AUNQ6ZP68 121 aa5.36□□□□□ -1.55
CLDND1-231ENST00000515620 ARL17AQ8IVW1 177 aa5.36□□□□□ -1.55
CLDND1-231ENST00000515620 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
CLDND1-231ENST00000515620 LINC00846Q9NV44 126 aa5.36□□□□□ -1.55
CLDND1-231ENST00000515620 MYMXA0A1B0GTQ4 84 aa5.35□□□□□ -1.55
CLDND1-231ENST00000515620 URB1-AS1Q96HZ7 61 aa5.35□□□□□ -1.55
CLDND1-231ENST00000515620 MIEN1Q9BRT3 115 aa5.35□□□□□ -1.55
CLDND1-231ENST00000515620 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
CLDND1-231ENST00000515620 A0A0G2JQZ4 141 aa5.34□□□□□ -1.55
CLDND1-231ENST00000515620 HINT1P49773 126 aaPredicted RBP5.34□□□□□ -1.55
CLDND1-231ENST00000515620 KRTAP10-10P60014 251 aa5.34□□□□□ -1.55
CLDND1-231ENST00000515620 COMMD7Q86VX2 200 aa5.34□□□□□ -1.55
CLDND1-231ENST00000515620 FABP9Q0Z7S8 132 aa5.33□□□□□ -1.56
CLDND1-231ENST00000515620 NDUFC2O95298 119 aa5.32□□□□□ -1.56
CLDND1-231ENST00000515620 LINC00614P0C842 121 aa5.32□□□□□ -1.56
CLDND1-231ENST00000515620 AKR1D1P51857 326 aa5.32□□□□□ -1.56
CLDND1-231ENST00000515620 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
CLDND1-231ENST00000515620 DEFB105AQ8NG35 78 aa5.32□□□□□ -1.56
CLDND1-231ENST00000515620 DHRS4-AS1Q9P1J3 65 aa5.32□□□□□ -1.56
CLDND1-231ENST00000515620 TSPEAR-AS2P59090 65 aa5.31□□□□□ -1.56
CLDND1-231ENST00000515620 Q75L30 129 aa5.31□□□□□ -1.56
CLDND1-231ENST00000515620 RPS10P5Q9NQ39 176 aa5.31□□□□□ -1.56
CLDND1-231ENST00000515620 TRAV12-1A0A0B4J245 112 aa5.3□□□□□ -1.56
CLDND1-231ENST00000515620 NPC2P61916 151 aa5.3□□□□□ -1.56
CLDND1-231ENST00000515620 TAL2Q16559 108 aa5.3□□□□□ -1.56
CLDND1-231ENST00000515620 C18orf32Q8TCD1 76 aa5.3□□□□□ -1.56
CLDND1-231ENST00000515620 OBSCN-AS1Q96MR7 158 aa5.3□□□□□ -1.56
CLDND1-231ENST00000515620 SEC11CQ9BY50 192 aa5.3□□□□□ -1.56
CLDND1-231ENST00000515620 TRBV20-1A0A075B6N2 111 aa5.29□□□□□ -1.56
CLDND1-231ENST00000515620 TCL1BO95988 128 aa5.29□□□□□ -1.56
CLDND1-231ENST00000515620 S100PP25815 95 aa5.29□□□□□ -1.56
CLDND1-231ENST00000515620 PCP2Q8IVA1 136 aa5.29□□□□□ -1.56
CLDND1-231ENST00000515620 CBY1Q9Y3M2 126 aa5.29□□□□□ -1.56
CLDND1-231ENST00000515620 TEX49A0A1B0GTD5 131 aa5.28□□□□□ -1.56
CLDND1-231ENST00000515620 SOSTDC1Q6X4U4 206 aa5.28□□□□□ -1.56
CLDND1-231ENST00000515620 COX19Q49B96 90 aa5.27□□□□□ -1.57
CLDND1-231ENST00000515620 C10orf91Q5T1B1 145 aa5.27□□□□□ -1.57
CLDND1-231ENST00000515620 PET117Q6UWS5 81 aa5.27□□□□□ -1.57
CLDND1-231ENST00000515620 IFI27L1Q96BM0 104 aa5.27□□□□□ -1.57
CLDND1-231ENST00000515620 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
CLDND1-231ENST00000515620 LEPROTO15243 131 aa5.26□□□□□ -1.57
CLDND1-231ENST00000515620 ELOF1P60002 83 aaKnown RBP5.26□□□□□ -1.57
CLDND1-231ENST00000515620 IFITM2Q01629 132 aa5.26□□□□□ -1.57
CLDND1-231ENST00000515620 RHEBQ15382 184 aa5.26□□□□□ -1.57
CLDND1-231ENST00000515620 OR13C6PQ8NH95 151 aa5.26□□□□□ -1.57
CLDND1-231ENST00000515620 COX7BP24311 80 aa5.25□□□□□ -1.57
CLDND1-231ENST00000515620 FAM236DA0A1B0GTK5 79 aa5.24□□□□□ -1.57
CLDND1-231ENST00000515620 J3QQQ9 107 aa5.24□□□□□ -1.57
CLDND1-231ENST00000515620 FAM236CP0DP71 79 aa5.24□□□□□ -1.57
CLDND1-231ENST00000515620 C20orf166-AS1Q96NR2 134 aa5.24□□□□□ -1.57
CLDND1-231ENST00000515620 H0Y8G0 127 aa5.23□□□□□ -1.57
CLDND1-231ENST00000515620 LGALS3P17931 250 aaKnown RBP5.22□□□□□ -1.57
CLDND1-231ENST00000515620 NMUP48645 174 aa5.22□□□□□ -1.57
CLDND1-231ENST00000515620 C6orf99Q4VX62 202 aa5.22□□□□□ -1.57
CLDND1-231ENST00000515620 ADAMTSL4-AS1Q5T5F5 129 aa5.22□□□□□ -1.57
CLDND1-231ENST00000515620 Q96NJ1 140 aa5.22□□□□□ -1.57
CLDND1-231ENST00000515620 TRAPPC1Q9Y5R8 145 aa5.22□□□□□ -1.57
CLDND1-231ENST00000515620 IGLV5-48A0A075B6I7 105 aa5.2□□□□□ -1.58
CLDND1-231ENST00000515620 A4D1N5 150 aa5.2□□□□□ -1.58
CLDND1-231ENST00000515620 KRTAP20-1Q3LI63 56 aa5.2□□□□□ -1.58
CLDND1-231ENST00000515620 SPANXDQ9BXN6 97 aa5.2□□□□□ -1.58
CLDND1-231ENST00000515620 SPANXCQ9NY87 97 aa5.2□□□□□ -1.58
CLDND1-231ENST00000515620 A0A0J9YXY3 114 aa5.19□□□□□ -1.58
CLDND1-231ENST00000515620 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
CLDND1-231ENST00000515620 HERVK_113P61574 105 aa5.18□□□□□ -1.58
CLDND1-231ENST00000515620 IGFL1Q6UW32 110 aa5.18□□□□□ -1.58
CLDND1-231ENST00000515620 NEBP20929 6669 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms