RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 HIST1H2BCP62807 126 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 HIST2H2BEQ16778 126 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.81□□□□□ -1.16
TCOF1-215ENST00000515516 ADAMTSL4-AS1Q5T5F5 129 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 SSBP3-AS1Q7Z2R9 100 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 HIST1H2BHQ93079 126 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 HIST1H2BNQ99877 126 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 HIST1H2BMQ99879 126 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 ZNF73O43830 326 aaPredicted RBP7.8□□□□□ -1.16
TCOF1-215ENST00000515516 MOBPQ13875 183 aa7.8□□□□□ -1.16
TCOF1-215ENST00000515516 PET117Q6UWS5 81 aa7.8□□□□□ -1.16
TCOF1-215ENST00000515516 SOSTDC1Q6X4U4 206 aa7.8□□□□□ -1.16
TCOF1-215ENST00000515516 Q9BRP9 147 aa7.8□□□□□ -1.16
TCOF1-215ENST00000515516 OR13C6PQ8NH95 151 aa7.79□□□□□ -1.16
TCOF1-215ENST00000515516 MUC2Q02817 5179 aa7.78□□□□□ -1.16
TCOF1-215ENST00000515516 TIMM17BO60830 172 aa7.78□□□□□ -1.16
TCOF1-215ENST00000515516 LINC01545Q5VT33 79 aa7.78□□□□□ -1.16
TCOF1-215ENST00000515516 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
TCOF1-215ENST00000515516 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
TCOF1-215ENST00000515516 EIF4EBP3O60516 100 aaPredicted RBP7.77□□□□□ -1.17
TCOF1-215ENST00000515516 LINC00308Q8TCZ7 52 aa7.77□□□□□ -1.17
TCOF1-215ENST00000515516 C9orf153Q5TBE3 101 aa7.76□□□□□ -1.17
TCOF1-215ENST00000515516 C5orf52A6NGY3 159 aa7.75□□□□□ -1.17
TCOF1-215ENST00000515516 RPS29P62273 56 aaKnown RBP7.75□□□□□ -1.17
TCOF1-215ENST00000515516 KRTDAPP60985 99 aa7.74□□□□□ -1.17
TCOF1-215ENST00000515516 LINC00518Q8N0U6 118 aa7.74□□□□□ -1.17
TCOF1-215ENST00000515516 LITAFQ99732 161 aa7.74□□□□□ -1.17
TCOF1-215ENST00000515516 SPANXDQ9BXN6 97 aa7.74□□□□□ -1.17
TCOF1-215ENST00000515516 C20orf202A1L168 122 aa7.73□□□□□ -1.17
TCOF1-215ENST00000515516 SLC25A20O43772 301 aa7.73□□□□□ -1.17
TCOF1-215ENST00000515516 C3orf79P0CE67 100 aa7.73□□□□□ -1.17
TCOF1-215ENST00000515516 SLC25A34Q6PIV7 304 aa7.73□□□□□ -1.17
TCOF1-215ENST00000515516 DHRS4-AS1Q9P1J3 65 aa7.73□□□□□ -1.17
TCOF1-215ENST00000515516 SCGB1D4Q6XE38 83 aa7.72□□□□□ -1.17
TCOF1-215ENST00000515516 ST20-AS1Q8NBB2 130 aa7.72□□□□□ -1.17
TCOF1-215ENST00000515516 COPS9Q8WXC6 57 aa7.72□□□□□ -1.17
TCOF1-215ENST00000515516 Q8N377 158 aa7.71□□□□□ -1.18
TCOF1-215ENST00000515516 KRTAP13-3Q3SY46 172 aa7.7□□□□□ -1.18
TCOF1-215ENST00000515516 COA6Q5JTJ3 125 aaKnown RBP7.7□□□□□ -1.18
TCOF1-215ENST00000515516 TTTY13Q9BZ97 58 aa7.7□□□□□ -1.18
TCOF1-215ENST00000515516 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
TCOF1-215ENST00000515516 COX7BP24311 80 aa7.69□□□□□ -1.18
TCOF1-215ENST00000515516 AKR1D1P51857 326 aa7.69□□□□□ -1.18
TCOF1-215ENST00000515516 LAMTOR3Q9UHA4 124 aa7.69□□□□□ -1.18
TCOF1-215ENST00000515516 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
TCOF1-215ENST00000515516 TAL2Q16559 108 aa7.67□□□□□ -1.18
TCOF1-215ENST00000515516 C6orf99Q4VX62 202 aa7.67□□□□□ -1.18
TCOF1-215ENST00000515516 IFITM1P13164 125 aa7.66□□□□□ -1.18
TCOF1-215ENST00000515516 SPRR1BP22528 89 aa7.66□□□□□ -1.18
TCOF1-215ENST00000515516 ELOF1P60002 83 aaKnown RBP7.66□□□□□ -1.18
TCOF1-215ENST00000515516 A6NDN8 102 aa7.65□□□□□ -1.18
TCOF1-215ENST00000515516 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.18
TCOF1-215ENST00000515516 Q6ZVH6 145 aa7.65□□□□□ -1.18
TCOF1-215ENST00000515516 DEFB105AQ8NG35 78 aa7.65□□□□□ -1.18
TCOF1-215ENST00000515516 ASB16-AS1Q495Z4 193 aa7.64□□□□□ -1.19
TCOF1-215ENST00000515516 ANKRD39Q53RE8 183 aa7.64□□□□□ -1.19
TCOF1-215ENST00000515516 ATOH7Q8N100 152 aa7.64□□□□□ -1.19
TCOF1-215ENST00000515516 LIMD2Q9BT23 127 aa7.64□□□□□ -1.19
TCOF1-215ENST00000515516 TRBV7-6A0A0J9YX20 115 aa7.63□□□□□ -1.19
TCOF1-215ENST00000515516 HRCT1Q6UXD1 115 aa7.63□□□□□ -1.19
TCOF1-215ENST00000515516 TEX49A0A1B0GTD5 131 aa7.62□□□□□ -1.19
TCOF1-215ENST00000515516 A0A1B0GWB2 263 aa7.62□□□□□ -1.19
TCOF1-215ENST00000515516 SNRPEP62304 92 aaKnown RBP7.62□□□□□ -1.19
TCOF1-215ENST00000515516 MUSTN1Q8IVN3 82 aa7.62□□□□□ -1.19
TCOF1-215ENST00000515516 TRAV13-2A0A0B4J235 113 aa7.6□□□□□ -1.19
TCOF1-215ENST00000515516 Q1RN00 199 aa7.6□□□□□ -1.19
TCOF1-215ENST00000515516 PCP2Q8IVA1 136 aa7.6□□□□□ -1.19
TCOF1-215ENST00000515516 PRO1933Q9H354 126 aa7.6□□□□□ -1.19
TCOF1-215ENST00000515516 A4D1N5 150 aa7.59□□□□□ -1.19
TCOF1-215ENST00000515516 S100A2P29034 98 aa7.59□□□□□ -1.19
TCOF1-215ENST00000515516 HSBP1L1C9JCN9 74 aa7.58□□□□□ -1.2
TCOF1-215ENST00000515516 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
TCOF1-215ENST00000515516 NHP2Q9NX24 153 aaKnown RBP7.58□□□□□ -1.2
TCOF1-215ENST00000515516 H7C2G1 150 aa7.57□□□□□ -1.2
TCOF1-215ENST00000515516 CD164Q04900 197 aa7.57□□□□□ -1.2
TCOF1-215ENST00000515516 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
TCOF1-215ENST00000515516 XP32Q5T750 250 aa7.56□□□□□ -1.2
TCOF1-215ENST00000515516 VAMP3Q15836 100 aa7.55□□□□□ -1.2
TCOF1-215ENST00000515516 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
TCOF1-215ENST00000515516 SMIM11BQ8TCY0 68 aa7.54□□□□□ -1.2
TCOF1-215ENST00000515516 IGLV5-48A0A075B6I7 105 aa7.53□□□□□ -1.2
TCOF1-215ENST00000515516 S100A6P06703 90 aa7.53□□□□□ -1.2
TCOF1-215ENST00000515516 HIST3H2BBQ8N257 126 aa7.53□□□□□ -1.2
TCOF1-215ENST00000515516 SMIM29Q86T20 159 aa7.52□□□□□ -1.21
TCOF1-215ENST00000515516 HIST1H2BLQ99880 126 aa7.52□□□□□ -1.21
TCOF1-215ENST00000515516 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
TCOF1-215ENST00000515516 F8WEM9 126 aa7.5□□□□□ -1.21
TCOF1-215ENST00000515516 KRTAP9-2Q9BYQ4 174 aa7.5□□□□□ -1.21
TCOF1-215ENST00000515516 S100A1P23297 94 aa7.49□□□□□ -1.21
TCOF1-215ENST00000515516 Q5XG85 94 aa7.49□□□□□ -1.21
TCOF1-215ENST00000515516 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
TCOF1-215ENST00000515516 TCL1BO95988 128 aa7.47□□□□□ -1.21
TCOF1-215ENST00000515516 A0A0G2JQZ4 141 aa7.46□□□□□ -1.22
TCOF1-215ENST00000515516 hADV29S1A0JD25 119 aa7.46□□□□□ -1.22
TCOF1-215ENST00000515516 SCGB1D1O95968 90 aa7.46□□□□□ -1.22
TCOF1-215ENST00000515516 LINC00575Q6W349 94 aa7.46□□□□□ -1.22
TCOF1-215ENST00000515516 PCOTHQ58A44 107 aa7.45□□□□□ -1.22
TCOF1-215ENST00000515516 C1orf195Q5TG92 126 aa7.45□□□□□ -1.22
TCOF1-215ENST00000515516 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
TCOF1-215ENST00000515516 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms