RNA–Protein interactions for RNA: ENST00000515452.1

NR1I3-233, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 2 BASIC

Gene NR1I3, Length 1,093 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-233	ENST00000515452	TMEM126A	Q9H061	195 aa		4.71	□□□□□ -1.66
NR1I3-233	ENST00000515452	TRBV10-2	A0A0K0K1G8	114 aa		4.7	□□□□□ -1.66
NR1I3-233	ENST00000515452		H0Y9J4	135 aa		4.7	□□□□□ -1.66
NR1I3-233	ENST00000515452	ZNF861P	O60384	105 aa		4.7	□□□□□ -1.66
NR1I3-233	ENST00000515452	COX8A	P10176	69 aa		4.7	□□□□□ -1.66
NR1I3-233	ENST00000515452	SPATA45	Q537H7	98 aa		4.7	□□□□□ -1.66
NR1I3-233	ENST00000515452	REG3G	Q6UW15	175 aa		4.7	□□□□□ -1.66
NR1I3-233	ENST00000515452	C14orf144	Q96I85	54 aa		4.7	□□□□□ -1.66
NR1I3-233	ENST00000515452	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.7	□□□□□ -1.66
NR1I3-233	ENST00000515452	FSIP2	Q5CZC0	6907 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	IGLV6-57	P01721	117 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	KRTAP1-4	P0C5Y4	121 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	SPRR1A	P35321	89 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	FAM19A1	Q7Z5A9	133 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	MUSTN1	Q8IVN3	82 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	LINC00337	Q8N6G1	96 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	VAMP8	Q9BV40	100 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	KCNQ1DN	Q9H478	68 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	CRCT1	Q9UGL9	99 aa		4.69	□□□□□ -1.66
NR1I3-233	ENST00000515452	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.68	□□□□□ -1.66
NR1I3-233	ENST00000515452	PRY	O14603	147 aa		4.68	□□□□□ -1.66
NR1I3-233	ENST00000515452	DDT	P30046	118 aa		4.68	□□□□□ -1.66
NR1I3-233	ENST00000515452	UBE2A	P49459	152 aa		4.68	□□□□□ -1.66
NR1I3-233	ENST00000515452	DLEU1	O43261	78 aa		4.67	□□□□□ -1.66
NR1I3-233	ENST00000515452	KRTAP10-8	P60410	259 aa		4.67	□□□□□ -1.66
NR1I3-233	ENST00000515452	C2orf91	Q6ZV80	131 aa		4.67	□□□□□ -1.66
NR1I3-233	ENST00000515452	DIRC1	Q969H9	104 aa		4.67	□□□□□ -1.66
NR1I3-233	ENST00000515452	CDIP1	Q9H305	208 aa		4.67	□□□□□ -1.66
NR1I3-233	ENST00000515452	LPA	P08519	4548 aa		4.66	□□□□□ -1.66
NR1I3-233	ENST00000515452	IFITM1	P13164	125 aa		4.66	□□□□□ -1.66
NR1I3-233	ENST00000515452	RPL28	P46779	137 aa	Known RBP	4.66	□□□□□ -1.66
NR1I3-233	ENST00000515452	S100A7L2	Q5SY68	101 aa		4.66	□□□□□ -1.66
NR1I3-233	ENST00000515452	XP32	Q5T750	250 aa		4.66	□□□□□ -1.66
NR1I3-233	ENST00000515452	PPDPF	Q9H3Y8	114 aa		4.66	□□□□□ -1.66
NR1I3-233	ENST00000515452	TRAV23DV6	A0A075B6W5	121 aa		4.65	□□□□□ -1.67
NR1I3-233	ENST00000515452		B5MCH6	92 aa		4.65	□□□□□ -1.67
NR1I3-233	ENST00000515452		Q6ZVH6	145 aa		4.65	□□□□□ -1.67
NR1I3-233	ENST00000515452	PRR26	Q8N8Z3	221 aa		4.65	□□□□□ -1.67
NR1I3-233	ENST00000515452	OR13C6P	Q8NH95	151 aa		4.65	□□□□□ -1.67
NR1I3-233	ENST00000515452	ANAPC11	Q9NYG5	84 aa		4.65	□□□□□ -1.67
NR1I3-233	ENST00000515452		A0A087X002	238 aa		4.64	□□□□□ -1.67
NR1I3-233	ENST00000515452	LOC105371267	A0A1B0GV96	52 aa		4.64	□□□□□ -1.67
NR1I3-233	ENST00000515452	ETDC	A0A1B0GVM5	59 aa		4.64	□□□□□ -1.67
NR1I3-233	ENST00000515452		A4D1N5	150 aa		4.64	□□□□□ -1.67
NR1I3-233	ENST00000515452	ERC2-IT1	O76042	136 aa		4.64	□□□□□ -1.67
NR1I3-233	ENST00000515452	SLC25A34	Q6PIV7	304 aa		4.64	□□□□□ -1.67
NR1I3-233	ENST00000515452	SMCR5	Q8TEV8	140 aa		4.64	□□□□□ -1.67
NR1I3-233	ENST00000515452		Q9BRP9	147 aa		4.64	□□□□□ -1.67
NR1I3-233	ENST00000515452	HIGD2A	Q9BW72	106 aa		4.64	□□□□□ -1.67
NR1I3-233	ENST00000515452	ZNF73	O43830	326 aa	Predicted RBP	4.63	□□□□□ -1.67
NR1I3-233	ENST00000515452		Q6ZRX8	168 aa		4.63	□□□□□ -1.67
NR1I3-233	ENST00000515452	HIST1H4G	Q99525	98 aa		4.63	□□□□□ -1.67
NR1I3-233	ENST00000515452	C12orf57	Q99622	126 aa		4.63	□□□□□ -1.67
NR1I3-233	ENST00000515452	HIGD1B	Q9P298	99 aa		4.63	□□□□□ -1.67
NR1I3-233	ENST00000515452		A6NDN8	102 aa		4.62	□□□□□ -1.67
NR1I3-233	ENST00000515452	LINC00518	Q8N0U6	118 aa		4.62	□□□□□ -1.67
NR1I3-233	ENST00000515452	COPS9	Q8WXC6	57 aa		4.62	□□□□□ -1.67
NR1I3-233	ENST00000515452	C6orf99	Q4VX62	202 aa		4.61	□□□□□ -1.67
NR1I3-233	ENST00000515452	KRTAP13-2	Q52LG2	175 aa		4.61	□□□□□ -1.67
NR1I3-233	ENST00000515452	S100A12	P80511	92 aa		4.6	□□□□□ -1.67
NR1I3-233	ENST00000515452	SMIM11B	Q8TCY0	68 aa		4.6	□□□□□ -1.67
NR1I3-233	ENST00000515452	SPRR4	Q96PI1	79 aa		4.6	□□□□□ -1.67
NR1I3-233	ENST00000515452	PRO1933	Q9H354	126 aa		4.6	□□□□□ -1.67
NR1I3-233	ENST00000515452	TRAV13-2	A0A0B4J235	113 aa		4.59	□□□□□ -1.67
NR1I3-233	ENST00000515452	CFC1B	P0CG36	223 aa		4.59	□□□□□ -1.67
NR1I3-233	ENST00000515452	CFC1	P0CG37	223 aa		4.59	□□□□□ -1.67
NR1I3-233	ENST00000515452	RPL13A	P40429	203 aa	Known RBP	4.59	□□□□□ -1.67
NR1I3-233	ENST00000515452	FXYD2	P54710	66 aa		4.59	□□□□□ -1.67
NR1I3-233	ENST00000515452	CEND1	Q8N111	149 aa		4.59	□□□□□ -1.67
NR1I3-233	ENST00000515452	C3orf22	Q8N5N4	141 aa		4.59	□□□□□ -1.67
NR1I3-233	ENST00000515452	ST20-AS1	Q8NBB2	130 aa		4.59	□□□□□ -1.67
NR1I3-233	ENST00000515452	SMIM6	P0DI80	62 aa		4.58	□□□□□ -1.68
NR1I3-233	ENST00000515452	COX7B	P24311	80 aa		4.58	□□□□□ -1.68
NR1I3-233	ENST00000515452	ELOF1	P60002	83 aa	Known RBP	4.58	□□□□□ -1.68
NR1I3-233	ENST00000515452	TAL2	Q16559	108 aa		4.58	□□□□□ -1.68
NR1I3-233	ENST00000515452	UQCR10	Q9UDW1	63 aa		4.58	□□□□□ -1.68
NR1I3-233	ENST00000515452	CRYGA	P11844	174 aa		4.57	□□□□□ -1.68
NR1I3-233	ENST00000515452	FAM229B	Q4G0N7	80 aa		4.57	□□□□□ -1.68
NR1I3-233	ENST00000515452	GAGE2A	Q6NT46	116 aa		4.57	□□□□□ -1.68
NR1I3-233	ENST00000515452		A0A0B4J2C4	111 aa		4.56	□□□□□ -1.68
NR1I3-233	ENST00000515452	HSD52	Q0P140	79 aa		4.56	□□□□□ -1.68
NR1I3-233	ENST00000515452	LINC00483	Q53H64	154 aa		4.56	□□□□□ -1.68
NR1I3-233	ENST00000515452	TYMSOS	Q8TAI1	123 aa		4.56	□□□□□ -1.68
NR1I3-233	ENST00000515452	CBY1	Q9Y3M2	126 aa		4.56	□□□□□ -1.68
NR1I3-233	ENST00000515452	TRBV7-6	A0A0J9YX20	115 aa		4.55	□□□□□ -1.68
NR1I3-233	ENST00000515452		A0A1B0GWB2	263 aa		4.55	□□□□□ -1.68
NR1I3-233	ENST00000515452		H7C2G1	150 aa		4.55	□□□□□ -1.68
NR1I3-233	ENST00000515452		K7ERJ3	54 aa		4.55	□□□□□ -1.68
NR1I3-233	ENST00000515452	HINT1	P49773	126 aa	Predicted RBP	4.55	□□□□□ -1.68
NR1I3-233	ENST00000515452	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.55	□□□□□ -1.68
NR1I3-233	ENST00000515452	LINC01547	P58512	204 aa	Predicted RBP	4.54	□□□□□ -1.68
NR1I3-233	ENST00000515452	RAB37	Q96AX2	223 aa		4.54	□□□□□ -1.68
NR1I3-233	ENST00000515452	NHP2	Q9NX24	153 aa	Known RBP	4.54	□□□□□ -1.68
NR1I3-233	ENST00000515452	DHRS4-AS1	Q9P1J3	65 aa		4.54	□□□□□ -1.68
NR1I3-233	ENST00000515452	IGLV9-49	A0A0B4J1Y8	123 aa		4.52	□□□□□ -1.69
NR1I3-233	ENST00000515452	TSPAN13	O95857	204 aa		4.52	□□□□□ -1.69
NR1I3-233	ENST00000515452	SPRR1B	P22528	89 aa		4.52	□□□□□ -1.69
NR1I3-233	ENST00000515452	CTAG1A	P78358	180 aa		4.52	□□□□□ -1.69
NR1I3-233	ENST00000515452	MOBP	Q13875	183 aa		4.52	□□□□□ -1.69
NR1I3-233	ENST00000515452	BVES-AS1	Q5T3Y7	98 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms