RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ATRXP46100 2492 aa8.36□□□□□ -1.07
SMAD1-215ENST00000515385 A8MU10 97 aa8.35□□□□□ -1.07
SMAD1-215ENST00000515385 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
SMAD1-215ENST00000515385 DNAJC9-AS1A6NH13 148 aa8.34□□□□□ -1.07
SMAD1-215ENST00000515385 PRR4Q16378 134 aa8.34□□□□□ -1.07
SMAD1-215ENST00000515385 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
SMAD1-215ENST00000515385 LINC00208Q96KT6 92 aa8.34□□□□□ -1.07
SMAD1-215ENST00000515385 Q75L30 129 aa8.33□□□□□ -1.08
SMAD1-215ENST00000515385 NKAPP1Q8N9T2 125 aa8.33□□□□□ -1.08
SMAD1-215ENST00000515385 SPTSSBQ8NFR3 76 aa8.32□□□□□ -1.08
SMAD1-215ENST00000515385 MAP1AP78559 2803 aaPredicted RBP8.31□□□□□ -1.08
SMAD1-215ENST00000515385 Q6ZRX8 168 aa8.31□□□□□ -1.08
SMAD1-215ENST00000515385 COL12A1Q99715 3063 aa8.31□□□□□ -1.08
SMAD1-215ENST00000515385 FASNP49327 2511 aaKnown RBP8.3□□□□□ -1.08
SMAD1-215ENST00000515385 CDC42SE1Q9NRR8 79 aa8.3□□□□□ -1.08
SMAD1-215ENST00000515385 BAHCC1Q9P281 2608 aa8.3□□□□□ -1.08
SMAD1-215ENST00000515385 CRYBG3Q68DQ2 2970 aa8.3□□□□□ -1.08
SMAD1-215ENST00000515385 VPS13CQ709C8 3753 aa8.29□□□□□ -1.08
SMAD1-215ENST00000515385 LOC101927531A0A1B0GV80 90 aa8.29□□□□□ -1.08
SMAD1-215ENST00000515385 C7orf33Q8WU49 177 aa8.29□□□□□ -1.08
SMAD1-215ENST00000515385 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
SMAD1-215ENST00000515385 PLA2G2DQ9UNK4 145 aa8.29□□□□□ -1.08
SMAD1-215ENST00000515385 KRTAP26-1Q6PEX3 210 aa8.28□□□□□ -1.08
SMAD1-215ENST00000515385 C15orf56Q8N910 161 aa8.27□□□□□ -1.09
SMAD1-215ENST00000515385 KRTAP4-16G5E9R7 235 aaPredicted RBP8.26□□□□□ -1.09
SMAD1-215ENST00000515385 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
SMAD1-215ENST00000515385 SPRR1AP35321 89 aa8.26□□□□□ -1.09
SMAD1-215ENST00000515385 IGSF10Q6WRI0 2623 aa8.25□□□□□ -1.09
SMAD1-215ENST00000515385 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
SMAD1-215ENST00000515385 IGKV2D-24A0A075B6R9 120 aa8.24□□□□□ -1.09
SMAD1-215ENST00000515385 H0Y9P7 68 aa8.24□□□□□ -1.09
SMAD1-215ENST00000515385 ITPR1Q14643 2758 aa8.24□□□□□ -1.09
SMAD1-215ENST00000515385 A6NED7 52 aa8.23□□□□□ -1.09
SMAD1-215ENST00000515385 DEFB4AO15263 64 aa8.23□□□□□ -1.09
SMAD1-215ENST00000515385 DEFB113Q30KQ7 82 aa8.23□□□□□ -1.09
SMAD1-215ENST00000515385 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-215ENST00000515385 IGLV1-50A0A075B6I6 118 aa8.22□□□□□ -1.09
SMAD1-215ENST00000515385 PRB2P02812 416 aaPredicted RBP8.22□□□□□ -1.09
SMAD1-215ENST00000515385 TLX1NBP0CAT3 122 aa8.22□□□□□ -1.09
SMAD1-215ENST00000515385 HTN3P15516 51 aa8.22□□□□□ -1.09
SMAD1-215ENST00000515385 SERTAD4-AS1Q5TG53 156 aa8.22□□□□□ -1.09
SMAD1-215ENST00000515385 WFDC13Q8IUB5 93 aa8.22□□□□□ -1.09
SMAD1-215ENST00000515385 DEFB135Q30KP9 77 aa8.22□□□□□ -1.09
SMAD1-215ENST00000515385 Q8NAQ8 132 aa8.22□□□□□ -1.09
SMAD1-215ENST00000515385 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
SMAD1-215ENST00000515385 NBPF19A0A087WUL8 3843 aa8.2□□□□□ -1.1
SMAD1-215ENST00000515385 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
SMAD1-215ENST00000515385 SPG11Q96JI7 2443 aa8.2□□□□□ -1.1
SMAD1-215ENST00000515385 LINC00476Q8WZB0 136 aa8.2□□□□□ -1.1
SMAD1-215ENST00000515385 H3BNG1 76 aa8.18□□□□□ -1.1
SMAD1-215ENST00000515385 MOBPQ13875 183 aa8.18□□□□□ -1.1
SMAD1-215ENST00000515385 WFDC10BQ8IUB3 73 aa8.18□□□□□ -1.1
SMAD1-215ENST00000515385 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
SMAD1-215ENST00000515385 COA5Q86WW8 74 aa8.18□□□□□ -1.1
SMAD1-215ENST00000515385 IGLV7-46A0A075B6I9 117 aa8.17□□□□□ -1.1
SMAD1-215ENST00000515385 IGLV8-61A0A075B6I0 122 aa8.17□□□□□ -1.1
SMAD1-215ENST00000515385 TLN2Q9Y4G6 2542 aa8.16□□□□□ -1.1
SMAD1-215ENST00000515385 RPL37AP8A6NKH3 93 aa8.16□□□□□ -1.1
SMAD1-215ENST00000515385 LINC01558Q9Y6Z2 57 aa8.16□□□□□ -1.1
SMAD1-215ENST00000515385 GCN1Q92616 2671 aaKnown RBP8.16□□□□□ -1.1
SMAD1-215ENST00000515385 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
SMAD1-215ENST00000515385 IGFL1Q6UW32 110 aa8.15□□□□□ -1.1
SMAD1-215ENST00000515385 HELZ2Q9BYK8 2649 aaKnown RBP8.15□□□□□ -1.1
SMAD1-215ENST00000515385 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.11
SMAD1-215ENST00000515385 ASB16-AS1Q495Z4 193 aa8.15□□□□□ -1.11
SMAD1-215ENST00000515385 SETXQ7Z333 2677 aaKnown RBP8.15□□□□□ -1.11
SMAD1-215ENST00000515385 MXRA5Q9NR99 2828 aa8.15□□□□□ -1.11
SMAD1-215ENST00000515385 A0A087X002 238 aa8.13□□□□□ -1.11
SMAD1-215ENST00000515385 MYO9AB2RTY4 2548 aa8.13□□□□□ -1.11
SMAD1-215ENST00000515385 ZNF462Q96JM2 2506 aa8.13□□□□□ -1.11
SMAD1-215ENST00000515385 PLAC8Q9NZF1 115 aa8.12□□□□□ -1.11
SMAD1-215ENST00000515385 AKAP9Q99996 3911 aa8.12□□□□□ -1.11
SMAD1-215ENST00000515385 A0A087WSZ3 146 aa8.12□□□□□ -1.11
SMAD1-215ENST00000515385 J3QKU1 62 aa8.12□□□□□ -1.11
SMAD1-215ENST00000515385 JMJD1CQ15652 2540 aa8.12□□□□□ -1.11
SMAD1-215ENST00000515385 CELSR2Q9HCU4 2923 aa8.11□□□□□ -1.11
SMAD1-215ENST00000515385 KRTAP1-3Q8IUG1 177 aa8.11□□□□□ -1.11
SMAD1-215ENST00000515385 A8MWP4 228 aa8.1□□□□□ -1.11
SMAD1-215ENST00000515385 CNBPP62633 177 aaKnown RBP8.1□□□□□ -1.11
SMAD1-215ENST00000515385 LINC01556Q5JQF7 62 aa8.1□□□□□ -1.11
SMAD1-215ENST00000515385 DOPEY1Q5JWR5 2465 aa8.1□□□□□ -1.11
SMAD1-215ENST00000515385 FLNBO75369 2602 aaKnown RBP8.09□□□□□ -1.11
SMAD1-215ENST00000515385 KRTAP10-9P60411 292 aa8.09□□□□□ -1.11
SMAD1-215ENST00000515385 REG3GQ6UW15 175 aa8.09□□□□□ -1.11
SMAD1-215ENST00000515385 USP9YO00507 2555 aaPredicted RBP8.09□□□□□ -1.11
SMAD1-215ENST00000515385 RPL37AP61513 92 aaKnown RBP8.08□□□□□ -1.12
SMAD1-215ENST00000515385 CSMD2Q7Z408 3487 aa8.08□□□□□ -1.12
SMAD1-215ENST00000515385 LINC00313P59037 77 aa8.07□□□□□ -1.12
SMAD1-215ENST00000515385 CFAP46Q8IYW2 2715 aa8.07□□□□□ -1.12
SMAD1-215ENST00000515385 FAM168BA1KXE4 195 aa8.07□□□□□ -1.12
SMAD1-215ENST00000515385 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
SMAD1-215ENST00000515385 ANKRD17O75179 2603 aaKnown RBP8.07□□□□□ -1.12
SMAD1-215ENST00000515385 USP9XQ93008 2570 aaPredicted RBP8.06□□□□□ -1.12
SMAD1-215ENST00000515385 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
SMAD1-215ENST00000515385 FN1P02751 2386 aaKnown RBP8.05□□□□□ -1.12
SMAD1-215ENST00000515385 ZANQ9Y493 2812 aa8.05□□□□□ -1.12
SMAD1-215ENST00000515385 MYO18BQ8IUG5 2567 aa8.04□□□□□ -1.12
SMAD1-215ENST00000515385 KRTAP7-1Q8IUC3 87 aa8.04□□□□□ -1.12
SMAD1-215ENST00000515385 LINC00472Q9H8W2 130 aa8.04□□□□□ -1.12
SMAD1-215ENST00000515385 MDFIQ99750 246 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms