RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-223	ENST00000515143	KRTAP9-9	Q9BYP9	154 aa		4.11	□□□□□ -1.75
SPOCK3-223	ENST00000515143	KRTAP9-4	Q9BYQ2	154 aa		4.11	□□□□□ -1.75
SPOCK3-223	ENST00000515143	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.11	□□□□□ -1.75
SPOCK3-223	ENST00000515143	ETDC	A0A1B0GVM5	59 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143	TIMM17B	O60830	172 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143	ERC2-IT1	O76042	136 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143	DDT	P30046	118 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143	HERVK_113	P61574	105 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143	S100A12	P80511	92 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143	ADAMTSL4-AS1	Q5T5F5	129 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143	SLC7A5P1	Q8MH63	180 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143	PPDPF	Q9H3Y8	114 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143	CBY1	Q9Y3M2	126 aa		4.1	□□□□□ -1.75
SPOCK3-223	ENST00000515143		A0A0J9YXY3	114 aa		4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143	NCR3	O14931	201 aa		4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143	FABP4	P15090	132 aa		4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143	SPRR1B	P22528	89 aa		4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143	KRTAP13-3	Q3SY46	172 aa		4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143	COA6	Q5JTJ3	125 aa	Known RBP	4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143	LINC01545	Q5VT33	79 aa		4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143	SOSTDC1	Q6X4U4	206 aa		4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143		Q8NBF4	154 aa		4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143	LITAF	Q99732	161 aa		4.09	□□□□□ -1.75
SPOCK3-223	ENST00000515143	FAT4	Q6V0I7	4981 aa		4.09	□□□□□ -1.76
SPOCK3-223	ENST00000515143	SYS1-DBNDD2	H3BUS1	97 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST1H2BK	O60814	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST1H2BJ	P06899	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	LGALS3	P17931	250 aa	Known RBP	4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST1H2BO	P23527	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST1H2BB	P33778	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST1H2BD	P58876	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST1H2BC	P62807	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	JOSD1	Q15040	202 aa	Predicted RBP	4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST2H2BE	Q16778	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST1H2BH	Q93079	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST1H2BN	Q99877	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HIST1H2BM	Q99879	126 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	RETNLB	Q9BQ08	111 aa		4.08	□□□□□ -1.76
SPOCK3-223	ENST00000515143	ASB16-AS1	Q495Z4	193 aa		4.07	□□□□□ -1.76
SPOCK3-223	ENST00000515143	LCE4A	Q5TA78	99 aa		4.07	□□□□□ -1.76
SPOCK3-223	ENST00000515143	PET117	Q6UWS5	81 aa		4.07	□□□□□ -1.76
SPOCK3-223	ENST00000515143		Q8N377	158 aa		4.07	□□□□□ -1.76
SPOCK3-223	ENST00000515143	DAND5	Q8N907	189 aa		4.07	□□□□□ -1.76
SPOCK3-223	ENST00000515143	TRAV23DV6	A0A075B6W5	121 aa		4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143	C9orf118	A6NHY6	69 aa		4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143		H0Y8G0	127 aa		4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143	ZNF73	O43830	326 aa	Predicted RBP	4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143	LINC00518	Q8N0U6	118 aa		4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143	LINC00308	Q8TCZ7	52 aa		4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143	PMCHL2	Q9BQD1	86 aa		4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143	MIEN1	Q9BRT3	115 aa		4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143	SPANXC	Q9NY87	97 aa		4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143	MUC17	Q685J3	4493 aa		4.06	□□□□□ -1.76
SPOCK3-223	ENST00000515143	TRBV7-6	A0A0J9YX20	115 aa		4.05	□□□□□ -1.76
SPOCK3-223	ENST00000515143	SLC25A20	O43772	301 aa		4.05	□□□□□ -1.76
SPOCK3-223	ENST00000515143	S100A7L2	Q5SY68	101 aa		4.05	□□□□□ -1.76
SPOCK3-223	ENST00000515143	GAGE2A	Q6NT46	116 aa		4.05	□□□□□ -1.76
SPOCK3-223	ENST00000515143	SPANXD	Q9BXN6	97 aa		4.04	□□□□□ -1.76
SPOCK3-223	ENST00000515143	DHRS4-AS1	Q9P1J3	65 aa		4.04	□□□□□ -1.76
SPOCK3-223	ENST00000515143	C3orf79	P0CE67	100 aa		4.03	□□□□□ -1.76
SPOCK3-223	ENST00000515143	HINT1	P49773	126 aa	Predicted RBP	4.03	□□□□□ -1.76
SPOCK3-223	ENST00000515143	MOBP	Q13875	183 aa		4.03	□□□□□ -1.76
SPOCK3-223	ENST00000515143		Q5XG85	94 aa		4.03	□□□□□ -1.76
SPOCK3-223	ENST00000515143		Q6ZVH6	145 aa		4.03	□□□□□ -1.76
SPOCK3-223	ENST00000515143	KRTAP9-7	A8MTY7	169 aa		4.02	□□□□□ -1.77
SPOCK3-223	ENST00000515143	IFITM1	P13164	125 aa		4.02	□□□□□ -1.77
SPOCK3-223	ENST00000515143	AKR1D1	P51857	326 aa		4.02	□□□□□ -1.77
SPOCK3-223	ENST00000515143	ELOF1	P60002	83 aa	Known RBP	4.02	□□□□□ -1.77
SPOCK3-223	ENST00000515143	CD164	Q04900	197 aa		4.02	□□□□□ -1.77
SPOCK3-223	ENST00000515143	SLC25A34	Q6PIV7	304 aa		4.02	□□□□□ -1.77
SPOCK3-223	ENST00000515143	IGLV9-49	A0A0B4J1Y8	123 aa		4.01	□□□□□ -1.77
SPOCK3-223	ENST00000515143	SEC61B	P60468	96 aa	Known RBP	4.01	□□□□□ -1.77
SPOCK3-223	ENST00000515143	ST20-AS1	Q8NBB2	130 aa		4.01	□□□□□ -1.77
SPOCK3-223	ENST00000515143	IGLV5-48	A0A075B6I7	105 aa		4	□□□□□ -1.77
SPOCK3-223	ENST00000515143	ZNF815P	A8K554	130 aa		4	□□□□□ -1.77
SPOCK3-223	ENST00000515143	SNRPE	P62304	92 aa	Known RBP	4	□□□□□ -1.77
SPOCK3-223	ENST00000515143	COPS9	Q8WXC6	57 aa		4	□□□□□ -1.77
SPOCK3-223	ENST00000515143	KRTAP4-1	Q9BYQ7	146 aa		4	□□□□□ -1.77
SPOCK3-223	ENST00000515143		A4D1N5	150 aa		3.99	□□□□□ -1.77
SPOCK3-223	ENST00000515143	LINC01547	P58512	204 aa	Predicted RBP	3.99	□□□□□ -1.77
SPOCK3-223	ENST00000515143	TEX49	A0A1B0GTD5	131 aa		3.98	□□□□□ -1.77
SPOCK3-223	ENST00000515143	COX7B	P24311	80 aa		3.98	□□□□□ -1.77
SPOCK3-223	ENST00000515143	NPC2	P61916	151 aa		3.98	□□□□□ -1.77
SPOCK3-223	ENST00000515143	C6orf99	Q4VX62	202 aa		3.98	□□□□□ -1.77
SPOCK3-223	ENST00000515143	SMIM29	Q86T20	159 aa		3.98	□□□□□ -1.77
SPOCK3-223	ENST00000515143	OR13C6P	Q8NH95	151 aa		3.98	□□□□□ -1.77
SPOCK3-223	ENST00000515143	TTTY13	Q9BZ97	58 aa		3.98	□□□□□ -1.77
SPOCK3-223	ENST00000515143	LAMTOR3	Q9UHA4	124 aa		3.98	□□□□□ -1.77
SPOCK3-223	ENST00000515143	KRTAP4-8	A0A0G2JLE6	195 aa		3.97	□□□□□ -1.77
SPOCK3-223	ENST00000515143		A0A1B0GWB2	263 aa		3.97	□□□□□ -1.77
SPOCK3-223	ENST00000515143	LIMD2	Q9BT23	127 aa		3.97	□□□□□ -1.77
SPOCK3-223	ENST00000515143	PRO1933	Q9H354	126 aa		3.97	□□□□□ -1.77
SPOCK3-223	ENST00000515143	C20orf202	A1L168	122 aa		3.96	□□□□□ -1.78
SPOCK3-223	ENST00000515143	KRTAP19-2	Q3LHN2	52 aa		3.96	□□□□□ -1.78
SPOCK3-223	ENST00000515143	TRAV13-2	A0A0B4J235	113 aa		3.95	□□□□□ -1.78
SPOCK3-223	ENST00000515143	KRTDAP	P60985	99 aa		3.95	□□□□□ -1.78
SPOCK3-223	ENST00000515143	TAL2	Q16559	108 aa		3.95	□□□□□ -1.78
SPOCK3-223	ENST00000515143	C9orf153	Q5TBE3	101 aa		3.95	□□□□□ -1.78
SPOCK3-223	ENST00000515143	MUSTN1	Q8IVN3	82 aa		3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms