RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 ZNF73O43830 326 aaPredicted RBP12.36□□□□□ -0.43
SMAD1-214ENST00000514831 J3QQQ9 107 aa12.32□□□□□ -0.44
SMAD1-214ENST00000514831 SPRR1BP22528 89 aa12.32□□□□□ -0.44
SMAD1-214ENST00000514831 H0Y8G0 127 aa12.31□□□□□ -0.44
SMAD1-214ENST00000514831 NMUP48645 174 aa12.31□□□□□ -0.44
SMAD1-214ENST00000514831 HRCT1Q6UXD1 115 aa12.31□□□□□ -0.44
SMAD1-214ENST00000514831 HSBP1O75506 76 aa12.3□□□□□ -0.44
SMAD1-214ENST00000514831 SLC25A34Q6PIV7 304 aa12.3□□□□□ -0.44
SMAD1-214ENST00000514831 PLNP26678 52 aa12.29□□□□□ -0.44
SMAD1-214ENST00000514831 SOSTDC1Q6X4U4 206 aa12.29□□□□□ -0.44
SMAD1-214ENST00000514831 HINT1P49773 126 aaPredicted RBP12.27□□□□□ -0.45
SMAD1-214ENST00000514831 CBY1Q9Y3M2 126 aa12.27□□□□□ -0.45
SMAD1-214ENST00000514831 EIF4EBP3O60516 100 aaPredicted RBP12.26□□□□□ -0.45
SMAD1-214ENST00000514831 HERVK_113P61574 105 aa12.26□□□□□ -0.45
SMAD1-214ENST00000514831 M0R2T5 61 aa12.25□□□□□ -0.45
SMAD1-214ENST00000514831 LGALS3P17931 250 aaKnown RBP12.25□□□□□ -0.45
SMAD1-214ENST00000514831 NPC2P61916 151 aa12.24□□□□□ -0.45
SMAD1-214ENST00000514831 LAMTOR3Q9UHA4 124 aa12.24□□□□□ -0.45
SMAD1-214ENST00000514831 CD164Q04900 197 aa12.23□□□□□ -0.45
SMAD1-214ENST00000514831 YPEL4Q96NS1 127 aa12.23□□□□□ -0.45
SMAD1-214ENST00000514831 DHRS4-AS1Q9P1J3 65 aa12.23□□□□□ -0.45
SMAD1-214ENST00000514831 LEPROTL1O95214 131 aa12.22□□□□□ -0.45
SMAD1-214ENST00000514831 DPM2O94777 84 aa12.21□□□□□ -0.45
SMAD1-214ENST00000514831 SNAPINO95295 136 aa12.21□□□□□ -0.45
SMAD1-214ENST00000514831 APOC3P02656 99 aa12.21□□□□□ -0.45
SMAD1-214ENST00000514831 ADAMTSL4-AS1Q5T5F5 129 aa12.21□□□□□ -0.45
SMAD1-214ENST00000514831 A0A0J9YXY3 114 aa12.19□□□□□ -0.46
SMAD1-214ENST00000514831 SVBPQ8N300 66 aa12.19□□□□□ -0.46
SMAD1-214ENST00000514831 FLGP20930 4061 aaPredicted RBP12.18□□□□□ -0.46
SMAD1-214ENST00000514831 RPL37P61927 97 aaKnown RBP12.18□□□□□ -0.46
SMAD1-214ENST00000514831 COX6B2Q6YFQ2 88 aa12.18□□□□□ -0.46
SMAD1-214ENST00000514831 IGKCP01834 107 aa12.17□□□□□ -0.46
SMAD1-214ENST00000514831 Q5XG85 94 aa12.17□□□□□ -0.46
SMAD1-214ENST00000514831 PMCHL2Q9BQD1 86 aa12.17□□□□□ -0.46
SMAD1-214ENST00000514831 SPANXCQ9NY87 97 aa12.16□□□□□ -0.46
SMAD1-214ENST00000514831 LINC00310P59036 64 aa12.15□□□□□ -0.46
SMAD1-214ENST00000514831 NDUFA5Q16718 116 aa12.15□□□□□ -0.46
SMAD1-214ENST00000514831 PRO1933Q9H354 126 aa12.15□□□□□ -0.46
SMAD1-214ENST00000514831 Q1RN00 199 aa12.14□□□□□ -0.47
SMAD1-214ENST00000514831 OR13C6PQ8NH95 151 aa12.14□□□□□ -0.47
SMAD1-214ENST00000514831 H7C2G1 150 aa12.13□□□□□ -0.47
SMAD1-214ENST00000514831 SERF1AO75920 110 aa12.13□□□□□ -0.47
SMAD1-214ENST00000514831 ELOF1P60002 83 aaKnown RBP12.13□□□□□ -0.47
SMAD1-214ENST00000514831 C1orf195Q5TG92 126 aa12.13□□□□□ -0.47
SMAD1-214ENST00000514831 HSPB8Q9UJY1 196 aa12.13□□□□□ -0.47
SMAD1-214ENST00000514831 SPANXDQ9BXN6 97 aa12.12□□□□□ -0.47
SMAD1-214ENST00000514831 E9PLD3 99 aa12.11□□□□□ -0.47
SMAD1-214ENST00000514831 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
SMAD1-214ENST00000514831 COX7BP24311 80 aa12.1□□□□□ -0.47
SMAD1-214ENST00000514831 TAL2Q16559 108 aa12.1□□□□□ -0.47
SMAD1-214ENST00000514831 LITAFQ99732 161 aa12.1□□□□□ -0.47
SMAD1-214ENST00000514831 TEX49A0A1B0GTD5 131 aa12.08□□□□□ -0.48
SMAD1-214ENST00000514831 FABP4P15090 132 aa12.08□□□□□ -0.48
SMAD1-214ENST00000514831 DEFB105AQ8NG35 78 aa12.08□□□□□ -0.48
SMAD1-214ENST00000514831 AKR1D1P51857 326 aa12.07□□□□□ -0.48
SMAD1-214ENST00000514831 C6orf99Q4VX62 202 aa12.07□□□□□ -0.48
SMAD1-214ENST00000514831 TIMM17BO60830 172 aa12.05□□□□□ -0.48
SMAD1-214ENST00000514831 TRGC2P03986 189 aa12.05□□□□□ -0.48
SMAD1-214ENST00000514831 SMIM29Q86T20 159 aa12.05□□□□□ -0.48
SMAD1-214ENST00000514831 IGLV5-48A0A075B6I7 105 aa12□□□□□ -0.49
SMAD1-214ENST00000514831 A0A0G2JQZ4 141 aa12□□□□□ -0.49
SMAD1-214ENST00000514831 LINC00518Q8N0U6 118 aa12□□□□□ -0.49
SMAD1-214ENST00000514831 TRBV7-6A0A0J9YX20 115 aa11.99□□□□□ -0.49
SMAD1-214ENST00000514831 KRTAP9-7A8MTY7 169 aa11.97□□□□□ -0.49
SMAD1-214ENST00000514831 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.97□□□□□ -0.49
SMAD1-214ENST00000514831 A0A1B0GWB2 263 aa11.96□□□□□ -0.49
SMAD1-214ENST00000514831 TCL1BO95988 128 aa11.94□□□□□ -0.5
SMAD1-214ENST00000514831 ZNF815PA8K554 130 aa11.93□□□□□ -0.5
SMAD1-214ENST00000514831 SYS1-DBNDD2H3BUS1 97 aa11.9□□□□□ -0.5
SMAD1-214ENST00000514831 TTTY13Q9BZ97 58 aa11.88□□□□□ -0.51
SMAD1-214ENST00000514831 Q6Q795 121 aa11.87□□□□□ -0.51
SMAD1-214ENST00000514831 A4D1N5 150 aa11.85□□□□□ -0.51
SMAD1-214ENST00000514831 CFC1P0CG37 223 aa11.85□□□□□ -0.51
SMAD1-214ENST00000514831 LINC01545Q5VT33 79 aa11.85□□□□□ -0.51
SMAD1-214ENST00000514831 NHP2Q9NX24 153 aaKnown RBP11.84□□□□□ -0.51
SMAD1-214ENST00000514831 Q75L30 129 aa11.83□□□□□ -0.52
SMAD1-214ENST00000514831 A6NDN8 102 aa11.82□□□□□ -0.52
SMAD1-214ENST00000514831 ATP11AUNQ6ZP68 121 aa11.82□□□□□ -0.52
SMAD1-214ENST00000514831 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
SMAD1-214ENST00000514831 F8WEM9 126 aa11.8□□□□□ -0.52
SMAD1-214ENST00000514831 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
SMAD1-214ENST00000514831 IFITM1P13164 125 aa11.79□□□□□ -0.52
SMAD1-214ENST00000514831 KRTAP9-8Q9BYQ0 159 aa11.79□□□□□ -0.52
SMAD1-214ENST00000514831 PET117Q6UWS5 81 aa11.78□□□□□ -0.52
SMAD1-214ENST00000514831 SCGB1D4Q6XE38 83 aa11.78□□□□□ -0.52
SMAD1-214ENST00000514831 OBSCN-AS1Q96MR7 158 aa11.78□□□□□ -0.52
SMAD1-214ENST00000514831 TRBV7-7A0A0K0K1E9 115 aa11.75□□□□□ -0.53
SMAD1-214ENST00000514831 COLCA2A8K830 154 aa11.75□□□□□ -0.53
SMAD1-214ENST00000514831 Q6JHZ5 121 aa11.74□□□□□ -0.53
SMAD1-214ENST00000514831 Q6ZVH6 145 aa11.74□□□□□ -0.53
SMAD1-214ENST00000514831 SMIM11BQ8TCY0 68 aa11.74□□□□□ -0.53
SMAD1-214ENST00000514831 CLEC2BQ92478 149 aa11.74□□□□□ -0.53
SMAD1-214ENST00000514831 SSPOA2VEC9 5147 aa11.72□□□□□ -0.53
SMAD1-214ENST00000514831 USH2AO75445 5202 aa11.71□□□□□ -0.53
SMAD1-214ENST00000514831 TRAV13-2A0A0B4J235 113 aa11.71□□□□□ -0.53
SMAD1-214ENST00000514831 C20orf202A1L168 122 aa11.7□□□□□ -0.54
SMAD1-214ENST00000514831 IGFL1Q6UW32 110 aa11.7□□□□□ -0.54
SMAD1-214ENST00000514831 MUSTN1Q8IVN3 82 aa11.7□□□□□ -0.54
SMAD1-214ENST00000514831 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
SMAD1-214ENST00000514831 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms