RNA–Protein interactions for RNA: ENST00000514308.3

PDLIM3-210, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 906 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-210ENST00000514308 PRO0461Q9UI25 63 aa8.34□□□□□ -1.07
PDLIM3-210ENST00000514308 TRIAP1O43715 76 aa8.33□□□□□ -1.08
PDLIM3-210ENST00000514308 NDUFC2O95298 119 aa8.33□□□□□ -1.08
PDLIM3-210ENST00000514308 ATXN8Q156A1 80 aa8.33□□□□□ -1.08
PDLIM3-210ENST00000514308 Q6ZRU5 148 aa8.33□□□□□ -1.08
PDLIM3-210ENST00000514308 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
PDLIM3-210ENST00000514308 UNQ6190/PRO20217Q6UXQ8 127 aa8.32□□□□□ -1.08
PDLIM3-210ENST00000514308 IGKV2-28A0A075B6P5 120 aa8.31□□□□□ -1.08
PDLIM3-210ENST00000514308 M0QXV9 152 aa8.31□□□□□ -1.08
PDLIM3-210ENST00000514308 IGKV2D-28P01615 120 aa8.31□□□□□ -1.08
PDLIM3-210ENST00000514308 RPL28P46779 137 aaKnown RBP8.31□□□□□ -1.08
PDLIM3-210ENST00000514308 LINC01600Q96MT4 127 aa8.31□□□□□ -1.08
PDLIM3-210ENST00000514308 GAGE2BQ13066 116 aa8.3□□□□□ -1.08
PDLIM3-210ENST00000514308 C10orf25Q5T742 122 aa8.3□□□□□ -1.08
PDLIM3-210ENST00000514308 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
PDLIM3-210ENST00000514308 LINC00337Q8N6G1 96 aa8.29□□□□□ -1.08
PDLIM3-210ENST00000514308 K7ERU9 68 aa8.28□□□□□ -1.08
PDLIM3-210ENST00000514308 RPL18AQ02543 176 aaKnown RBP8.28□□□□□ -1.08
PDLIM3-210ENST00000514308 RNF151Q2KHN1 245 aa8.28□□□□□ -1.08
PDLIM3-210ENST00000514308 C6orf48Q9UBA6 75 aa8.28□□□□□ -1.08
PDLIM3-210ENST00000514308 LST1O00453 97 aa8.27□□□□□ -1.09
PDLIM3-210ENST00000514308 PRR3P79522 188 aaKnown RBP8.27□□□□□ -1.09
PDLIM3-210ENST00000514308 C9orf116Q5BN46 136 aaPredicted RBP8.27□□□□□ -1.09
PDLIM3-210ENST00000514308 LRP1Q07954 4544 aaKnown RBP8.27□□□□□ -1.09
PDLIM3-210ENST00000514308 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
PDLIM3-210ENST00000514308 TRBV10-2A0A0K0K1G8 114 aa8.25□□□□□ -1.09
PDLIM3-210ENST00000514308 H0YGX0 51 aa8.25□□□□□ -1.09
PDLIM3-210ENST00000514308 TMEM126AQ9H061 195 aa8.25□□□□□ -1.09
PDLIM3-210ENST00000514308 C9JAW5 83 aa8.24□□□□□ -1.09
PDLIM3-210ENST00000514308 SLC25A20O43772 301 aa8.24□□□□□ -1.09
PDLIM3-210ENST00000514308 TRACP01848 142 aa8.24□□□□□ -1.09
PDLIM3-210ENST00000514308 SERTAD4-AS1Q5TG53 156 aa8.24□□□□□ -1.09
PDLIM3-210ENST00000514308 SMIM11BQ8TCY0 68 aa8.24□□□□□ -1.09
PDLIM3-210ENST00000514308 H3BT86 120 aa8.23□□□□□ -1.09
PDLIM3-210ENST00000514308 ETDBQ3ZM63 59 aa8.23□□□□□ -1.09
PDLIM3-210ENST00000514308 Q6ZRP5 223 aa8.23□□□□□ -1.09
PDLIM3-210ENST00000514308 OR13C6PQ8NH95 151 aa8.23□□□□□ -1.09
PDLIM3-210ENST00000514308 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
PDLIM3-210ENST00000514308 A0A1W2PNN7 141 aa8.22□□□□□ -1.09
PDLIM3-210ENST00000514308 NDUFC2-KCTD14E9PQ53 114 aa8.22□□□□□ -1.09
PDLIM3-210ENST00000514308 J3QR89 54 aa8.22□□□□□ -1.09
PDLIM3-210ENST00000514308 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
PDLIM3-210ENST00000514308 TEN1Q86WV5 123 aa8.22□□□□□ -1.09
PDLIM3-210ENST00000514308 ANKRD29Q8N6D5 301 aa8.22□□□□□ -1.09
PDLIM3-210ENST00000514308 TLX1NBP0CAT3 122 aa8.21□□□□□ -1.1
PDLIM3-210ENST00000514308 MTURNQ8N3F0 131 aa8.21□□□□□ -1.1
PDLIM3-210ENST00000514308 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
PDLIM3-210ENST00000514308 A0A1B0GX51 115 aa8.19□□□□□ -1.1
PDLIM3-210ENST00000514308 GAGE2EQ4V326 116 aa8.19□□□□□ -1.1
PDLIM3-210ENST00000514308 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
PDLIM3-210ENST00000514308 PPDPFLQ8WWR9 84 aa8.19□□□□□ -1.1
PDLIM3-210ENST00000514308 GAGE2DQ9UEU5 116 aa8.19□□□□□ -1.1
PDLIM3-210ENST00000514308 S100A7L2Q5SY68 101 aa8.18□□□□□ -1.1
PDLIM3-210ENST00000514308 IGLV6-57P01721 117 aa8.17□□□□□ -1.1
PDLIM3-210ENST00000514308 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
PDLIM3-210ENST00000514308 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
PDLIM3-210ENST00000514308 PHF5AQ7RTV0 110 aaKnown RBP8.17□□□□□ -1.1
PDLIM3-210ENST00000514308 Q8NDZ9 215 aa8.17□□□□□ -1.1
PDLIM3-210ENST00000514308 CBY1Q9Y3M2 126 aa8.17□□□□□ -1.1
PDLIM3-210ENST00000514308 NCR3O14931 201 aa8.16□□□□□ -1.1
PDLIM3-210ENST00000514308 PKHD1L1Q86WI1 4243 aa8.16□□□□□ -1.1
PDLIM3-210ENST00000514308 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
PDLIM3-210ENST00000514308 FAM168BA1KXE4 195 aa8.15□□□□□ -1.1
PDLIM3-210ENST00000514308 M0R378 163 aa8.15□□□□□ -1.1
PDLIM3-210ENST00000514308 VPREB1P12018 145 aa8.15□□□□□ -1.1
PDLIM3-210ENST00000514308 FAM19A5Q7Z5A7 132 aaPredicted RBP8.15□□□□□ -1.1
PDLIM3-210ENST00000514308 FAM218AQ96MZ4 157 aa8.15□□□□□ -1.1
PDLIM3-210ENST00000514308 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.1
PDLIM3-210ENST00000514308 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.1
PDLIM3-210ENST00000514308 C1orf137Q5JT78 98 aa8.14□□□□□ -1.11
PDLIM3-210ENST00000514308 SNCGO76070 127 aa8.13□□□□□ -1.11
PDLIM3-210ENST00000514308 BAALC-AS2P0C853 105 aa8.13□□□□□ -1.11
PDLIM3-210ENST00000514308 TRBV7-6A0A0J9YX20 115 aa8.12□□□□□ -1.11
PDLIM3-210ENST00000514308 DNAL4O96015 105 aa8.12□□□□□ -1.11
PDLIM3-210ENST00000514308 LINC00167Q96N53 147 aa8.12□□□□□ -1.11
PDLIM3-210ENST00000514308 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
PDLIM3-210ENST00000514308 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
PDLIM3-210ENST00000514308 VPS25Q9BRG1 176 aa8.11□□□□□ -1.11
PDLIM3-210ENST00000514308 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
PDLIM3-210ENST00000514308 TRBV10-3A0A0K0K1G6 114 aa8.1□□□□□ -1.11
PDLIM3-210ENST00000514308 UBE2BP63146 152 aa8.1□□□□□ -1.11
PDLIM3-210ENST00000514308 TRAV23DV6A0A075B6W5 121 aa8.09□□□□□ -1.11
PDLIM3-210ENST00000514308 IGLV7-43P04211 117 aa8.09□□□□□ -1.11
PDLIM3-210ENST00000514308 KRTAP7-1Q8IUC3 87 aa8.09□□□□□ -1.11
PDLIM3-210ENST00000514308 LINC00575Q6W349 94 aa8.08□□□□□ -1.12
PDLIM3-210ENST00000514308 DIRC1Q969H9 104 aa8.08□□□□□ -1.12
PDLIM3-210ENST00000514308 TEX49A0A1B0GTD5 131 aa8.07□□□□□ -1.12
PDLIM3-210ENST00000514308 H3BQ85 93 aa8.07□□□□□ -1.12
PDLIM3-210ENST00000514308 KRTAP11-1Q8IUC1 163 aa8.07□□□□□ -1.12
PDLIM3-210ENST00000514308 ORMDL1Q9P0S3 153 aa8.07□□□□□ -1.12
PDLIM3-210ENST00000514308 HMCN2Q8NDA2 5059 aa8.06□□□□□ -1.12
PDLIM3-210ENST00000514308 ZNF73O43830 326 aaPredicted RBP8.06□□□□□ -1.12
PDLIM3-210ENST00000514308 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
PDLIM3-210ENST00000514308 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
PDLIM3-210ENST00000514308 C22orf24Q9Y442 160 aa8.06□□□□□ -1.12
PDLIM3-210ENST00000514308 LORP23490 312 aaPredicted RBP8.05□□□□□ -1.12
PDLIM3-210ENST00000514308 hADV29S1A0JD25 119 aa8.04□□□□□ -1.12
PDLIM3-210ENST00000514308 GHRHP01286 108 aa8.04□□□□□ -1.12
PDLIM3-210ENST00000514308 COX7BP24311 80 aa8.04□□□□□ -1.12
PDLIM3-210ENST00000514308 KCNQ1DNQ9H478 68 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms