RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 C4orf3Q8WVX3 66 aa2.15□□□□□ -2.07
NIPBL-207ENST00000513819 PRO2289Q9P1D8 64 aa2.15□□□□□ -2.07
NIPBL-207ENST00000513819 LYNX1G3V0Z9 82 aa2.14□□□□□ -2.07
NIPBL-207ENST00000513819 LY6G6CO95867 125 aa2.14□□□□□ -2.07
NIPBL-207ENST00000513819 ACYP2P14621 99 aa2.14□□□□□ -2.07
NIPBL-207ENST00000513819 KLK9Q2XQG4 91 aa2.14□□□□□ -2.07
NIPBL-207ENST00000513819 TP53AIP1Q9HCN2 124 aa2.14□□□□□ -2.07
NIPBL-207ENST00000513819 CCL26Q9Y258 94 aa2.14□□□□□ -2.07
NIPBL-207ENST00000513819 A0A0G2JQZ4 141 aa2.13□□□□□ -2.07
NIPBL-207ENST00000513819 WFDC13Q8IUB5 93 aa2.13□□□□□ -2.07
NIPBL-207ENST00000513819 PCOTHQ58A44 107 aa2.12□□□□□ -2.07
NIPBL-207ENST00000513819 SSBP3-AS1Q7Z2R9 100 aa2.12□□□□□ -2.07
NIPBL-207ENST00000513819 PDE4DIPQ5VU43 2346 aa2.12□□□□□ -2.07
NIPBL-207ENST00000513819 ABCA4P78363 2273 aa2.11□□□□□ -2.07
NIPBL-207ENST00000513819 KMT2BQ9UMN6 2715 aaPredicted RBP2.11□□□□□ -2.07
NIPBL-207ENST00000513819 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
NIPBL-207ENST00000513819 WFDC10BQ8IUB3 73 aa2.11□□□□□ -2.07
NIPBL-207ENST00000513819 TOMM7Q9P0U1 55 aa2.11□□□□□ -2.07
NIPBL-207ENST00000513819 KAAG1Q9UBP8 84 aa2.11□□□□□ -2.07
NIPBL-207ENST00000513819 A8MTW9 85 aa2.1□□□□□ -2.07
NIPBL-207ENST00000513819 MINOS1Q5TGZ0 78 aa2.1□□□□□ -2.07
NIPBL-207ENST00000513819 CUL9Q8IWT3 2517 aa2.1□□□□□ -2.07
NIPBL-207ENST00000513819 SPTY2D1-AS1A0A0U1RR47 76 aa2.09□□□□□ -2.07
NIPBL-207ENST00000513819 G3V318 75 aa2.09□□□□□ -2.07
NIPBL-207ENST00000513819 TPRXLQ17RH7 258 aa2.09□□□□□ -2.07
NIPBL-207ENST00000513819 C6orf48Q9UBA6 75 aa2.09□□□□□ -2.07
NIPBL-207ENST00000513819 PSORS1C2Q9UIG4 136 aa2.09□□□□□ -2.07
NIPBL-207ENST00000513819 MED13LQ71F56 2210 aa2.09□□□□□ -2.08
NIPBL-207ENST00000513819 APELAP0DMC3 54 aa2.08□□□□□ -2.08
NIPBL-207ENST00000513819 DEFB110Q30KQ9 67 aa2.08□□□□□ -2.08
NIPBL-207ENST00000513819 MMP24-AS1A0A0U1RRL7 71 aa2.07□□□□□ -2.08
NIPBL-207ENST00000513819 PTPRQQ9UMZ3 2332 aa2.06□□□□□ -2.08
NIPBL-207ENST00000513819 H0YAA0 97 aa2.06□□□□□ -2.08
NIPBL-207ENST00000513819 KRTAP10-1P60331 282 aa2.06□□□□□ -2.08
NIPBL-207ENST00000513819 SPACA4Q8TDM5 124 aa2.06□□□□□ -2.08
NIPBL-207ENST00000513819 CRIPTQ9P021 101 aa2.05□□□□□ -2.08
NIPBL-207ENST00000513819 GVQW2A0A096LPI5 108 aaPredicted RBP2.04□□□□□ -2.08
NIPBL-207ENST00000513819 DEFB131AP59861 70 aa2.04□□□□□ -2.08
NIPBL-207ENST00000513819 Q6ZRX8 168 aa2.04□□□□□ -2.08
NIPBL-207ENST00000513819 SORL1Q92673 2214 aa2.04□□□□□ -2.08
NIPBL-207ENST00000513819 PLCE1Q9P212 2302 aa2.04□□□□□ -2.08
NIPBL-207ENST00000513819 RP1P56715 2156 aa2.03□□□□□ -2.08
NIPBL-207ENST00000513819 CLPSL2Q6UWE3 100 aa2.03□□□□□ -2.08
NIPBL-207ENST00000513819 ALMS1Q8TCU4 4167 aa2.02□□□□□ -2.09
NIPBL-207ENST00000513819 Q6ZSA8 131 aa2.02□□□□□ -2.09
NIPBL-207ENST00000513819 RTTNQ86VV8 2226 aa2.02□□□□□ -2.09
NIPBL-207ENST00000513819 DEFB1P60022 68 aa2.01□□□□□ -2.09
NIPBL-207ENST00000513819 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
NIPBL-207ENST00000513819 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
NIPBL-207ENST00000513819 PLAC4Q8WY50 150 aa2.01□□□□□ -2.09
NIPBL-207ENST00000513819 MRPL34Q9BQ48 92 aaKnown RBP2.01□□□□□ -2.09
NIPBL-207ENST00000513819 NAV3Q8IVL0 2385 aa2.01□□□□□ -2.09
NIPBL-207ENST00000513819 INE1O15225 51 aa2□□□□□ -2.09
NIPBL-207ENST00000513819 URB1O60287 2271 aaKnown RBP2□□□□□ -2.09
NIPBL-207ENST00000513819 CD52P31358 61 aa1.99□□□□□ -2.09
NIPBL-207ENST00000513819 COX6B2Q6YFQ2 88 aa1.99□□□□□ -2.09
NIPBL-207ENST00000513819 TECTAO75443 2155 aa1.98□□□□□ -2.09
NIPBL-207ENST00000513819 KRTAP13-1Q8IUC0 172 aa1.98□□□□□ -2.09
NIPBL-207ENST00000513819 DEFB105AQ8NG35 78 aa1.98□□□□□ -2.09
NIPBL-207ENST00000513819 CNTRLQ7Z7A1 2325 aa1.97□□□□□ -2.09
NIPBL-207ENST00000513819 SPINK13Q1W4C9 94 aa1.97□□□□□ -2.09
NIPBL-207ENST00000513819 DEFB109BQ30KR1 87 aa1.97□□□□□ -2.09
NIPBL-207ENST00000513819 H1FX-AS1Q4G0G2 97 aa1.97□□□□□ -2.09
NIPBL-207ENST00000513819 Q6ZRN7 208 aaPredicted RBP1.97□□□□□ -2.09
NIPBL-207ENST00000513819 ANKRD17O75179 2603 aaKnown RBP1.96□□□□□ -2.1
NIPBL-207ENST00000513819 SPRR1AP35321 89 aa1.96□□□□□ -2.1
NIPBL-207ENST00000513819 UNQ6190/PRO20217Q6UXQ8 127 aa1.96□□□□□ -2.1
NIPBL-207ENST00000513819 DEFB108BQ8NET1 73 aa1.96□□□□□ -2.1
NIPBL-207ENST00000513819 RHPN1-AS1Q9BWJ2 59 aa1.96□□□□□ -2.1
NIPBL-207ENST00000513819 HIVEP2P31629 2446 aa1.96□□□□□ -2.1
NIPBL-207ENST00000513819 DEFB130BP0DP73 79 aa1.95□□□□□ -2.1
NIPBL-207ENST00000513819 DEFB130AP0DP74 79 aa1.95□□□□□ -2.1
NIPBL-207ENST00000513819 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
NIPBL-207ENST00000513819 C10orf95Q9H7T3 257 aa1.95□□□□□ -2.1
NIPBL-207ENST00000513819 Q9Y3F1 56 aa1.95□□□□□ -2.1
NIPBL-207ENST00000513819 C10orf99Q6UWK7 81 aa1.94□□□□□ -2.1
NIPBL-207ENST00000513819 KNL1Q8NG31 2342 aa1.94□□□□□ -2.1
NIPBL-207ENST00000513819 DOPEY2Q9Y3R5 2298 aa1.93□□□□□ -2.1
NIPBL-207ENST00000513819 H3BUA1 57 aa1.93□□□□□ -2.1
NIPBL-207ENST00000513819 LYNX1P0DP58 116 aa1.93□□□□□ -2.1
NIPBL-207ENST00000513819 LELP1Q5T871 98 aa1.93□□□□□ -2.1
NIPBL-207ENST00000513819 RPL37P61927 97 aaKnown RBP1.92□□□□□ -2.1
NIPBL-207ENST00000513819 USMG5Q96IX5 58 aa1.92□□□□□ -2.1
NIPBL-207ENST00000513819 ASCC3Q8N3C0 2202 aaKnown RBP1.92□□□□□ -2.1
NIPBL-207ENST00000513819 TRIOBPQ9H2D6 2365 aa1.92□□□□□ -2.1
NIPBL-207ENST00000513819 BRWD1Q9NSI6 2320 aa1.91□□□□□ -2.1
NIPBL-207ENST00000513819 SPRR1BP22528 89 aa1.91□□□□□ -2.1
NIPBL-207ENST00000513819 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.91□□□□□ -2.1
NIPBL-207ENST00000513819 ASXL3Q9C0F0 2248 aa1.9□□□□□ -2.1
NIPBL-207ENST00000513819 K7EIL1 84 aa1.9□□□□□ -2.11
NIPBL-207ENST00000513819 AHCTF1Q8WYP5 2266 aa1.9□□□□□ -2.11
NIPBL-207ENST00000513819 HTN1P15515 57 aa1.89□□□□□ -2.11
NIPBL-207ENST00000513819 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
NIPBL-207ENST00000513819 DEFB123Q8N688 67 aa1.89□□□□□ -2.11
NIPBL-207ENST00000513819 DEFB119Q8N690 84 aa1.88□□□□□ -2.11
NIPBL-207ENST00000513819 ZFHX2Q9C0A1 2572 aaPredicted RBP1.87□□□□□ -2.11
NIPBL-207ENST00000513819 A0A0C4DFX4 3053 aa1.87□□□□□ -2.11
NIPBL-207ENST00000513819 UBE2DNLQ8IWF7 75 aa1.87□□□□□ -2.11
NIPBL-207ENST00000513819 ABCA1O95477 2261 aa1.86□□□□□ -2.11
NIPBL-207ENST00000513819 WNK1Q9H4A3 2382 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms