RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 AKR1D1P51857 326 aa5.67□□□□□ -1.5
RNF4-221ENST00000513643 CTAG1AP78358 180 aa5.67□□□□□ -1.5
RNF4-221ENST00000513643 SPRR4Q96PI1 79 aa5.67□□□□□ -1.5
RNF4-221ENST00000513643 C20orf202A1L168 122 aa5.66□□□□□ -1.5
RNF4-221ENST00000513643 TYMSOSQ8TAI1 123 aa5.66□□□□□ -1.5
RNF4-221ENST00000513643 SPANXCQ9NY87 97 aa5.66□□□□□ -1.5
RNF4-221ENST00000513643 SNRPEP62304 92 aaKnown RBP5.65□□□□□ -1.5
RNF4-221ENST00000513643 LINC00483Q53H64 154 aa5.65□□□□□ -1.5
RNF4-221ENST00000513643 Q9BRP9 147 aa5.65□□□□□ -1.5
RNF4-221ENST00000513643 MIEN1Q9BRT3 115 aa5.65□□□□□ -1.5
RNF4-221ENST00000513643 HIGD2AQ9BW72 106 aa5.65□□□□□ -1.5
RNF4-221ENST00000513643 SPANXDQ9BXN6 97 aa5.65□□□□□ -1.5
RNF4-221ENST00000513643 ERC2-IT1O76042 136 aa5.64□□□□□ -1.51
RNF4-221ENST00000513643 Q6ZRX8 168 aa5.64□□□□□ -1.51
RNF4-221ENST00000513643 PCP2Q8IVA1 136 aa5.64□□□□□ -1.51
RNF4-221ENST00000513643 ATOH7Q8N100 152 aa5.64□□□□□ -1.51
RNF4-221ENST00000513643 ETDCA0A1B0GVM5 59 aa5.63□□□□□ -1.51
RNF4-221ENST00000513643 C5orf52A6NGY3 159 aa5.63□□□□□ -1.51
RNF4-221ENST00000513643 NPC2P61916 151 aa5.63□□□□□ -1.51
RNF4-221ENST00000513643 Q6ZVH6 145 aa5.63□□□□□ -1.51
RNF4-221ENST00000513643 TRAV23DV6A0A075B6W5 121 aa5.62□□□□□ -1.51
RNF4-221ENST00000513643 ZNF73O43830 326 aaPredicted RBP5.62□□□□□ -1.51
RNF4-221ENST00000513643 S100A12P80511 92 aa5.62□□□□□ -1.51
RNF4-221ENST00000513643 S100A7L2Q5SY68 101 aa5.62□□□□□ -1.51
RNF4-221ENST00000513643 C3orf22Q8N5N4 141 aa5.62□□□□□ -1.51
RNF4-221ENST00000513643 ZNF706Q9Y5V0 76 aaPredicted RBP5.62□□□□□ -1.51
RNF4-221ENST00000513643 IFITM1P13164 125 aa5.61□□□□□ -1.51
RNF4-221ENST00000513643 MUC2Q02817 5179 aa5.61□□□□□ -1.51
RNF4-221ENST00000513643 LINC00518Q8N0U6 118 aa5.61□□□□□ -1.51
RNF4-221ENST00000513643 S100A2P29034 98 aa5.6□□□□□ -1.51
RNF4-221ENST00000513643 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
RNF4-221ENST00000513643 CBY1Q9Y3M2 126 aa5.6□□□□□ -1.51
RNF4-221ENST00000513643 TSPAN13O95857 204 aa5.59□□□□□ -1.51
RNF4-221ENST00000513643 S100A6P06703 90 aa5.59□□□□□ -1.51
RNF4-221ENST00000513643 SCGB1D4Q6XE38 83 aa5.59□□□□□ -1.51
RNF4-221ENST00000513643 JOSD1Q15040 202 aaPredicted RBP5.58□□□□□ -1.52
RNF4-221ENST00000513643 MUSTN1Q8IVN3 82 aa5.58□□□□□ -1.52
RNF4-221ENST00000513643 MUC17Q685J3 4493 aa5.57□□□□□ -1.52
RNF4-221ENST00000513643 TRBV7-6A0A0J9YX20 115 aa5.57□□□□□ -1.52
RNF4-221ENST00000513643 SPRR1BP22528 89 aa5.57□□□□□ -1.52
RNF4-221ENST00000513643 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
RNF4-221ENST00000513643 COPS9Q8WXC6 57 aa5.57□□□□□ -1.52
RNF4-221ENST00000513643 ELOF1P60002 83 aaKnown RBP5.56□□□□□ -1.52
RNF4-221ENST00000513643 GAGE2AQ6NT46 116 aa5.56□□□□□ -1.52
RNF4-221ENST00000513643 SSBP3-AS1Q7Z2R9 100 aa5.56□□□□□ -1.52
RNF4-221ENST00000513643 PRR4Q16378 134 aa5.55□□□□□ -1.52
RNF4-221ENST00000513643 ST20-AS1Q8NBB2 130 aa5.55□□□□□ -1.52
RNF4-221ENST00000513643 OR13C6PQ8NH95 151 aa5.55□□□□□ -1.52
RNF4-221ENST00000513643 DHRS4-AS1Q9P1J3 65 aa5.55□□□□□ -1.52
RNF4-221ENST00000513643 DLEU1O43261 78 aa5.54□□□□□ -1.52
RNF4-221ENST00000513643 HINT1P49773 126 aaPredicted RBP5.54□□□□□ -1.52
RNF4-221ENST00000513643 C6orf99Q4VX62 202 aa5.54□□□□□ -1.52
RNF4-221ENST00000513643 Q8NBF4 154 aa5.54□□□□□ -1.52
RNF4-221ENST00000513643 HSBP1L1C9JCN9 74 aa5.53□□□□□ -1.52
RNF4-221ENST00000513643 SPINK1P00995 79 aa5.53□□□□□ -1.52
RNF4-221ENST00000513643 COX8AP10176 69 aa5.53□□□□□ -1.52
RNF4-221ENST00000513643 COX7BP24311 80 aa5.53□□□□□ -1.52
RNF4-221ENST00000513643 RPS29P62273 56 aaKnown RBP5.53□□□□□ -1.52
RNF4-221ENST00000513643 TRAV13-2A0A0B4J235 113 aa5.52□□□□□ -1.53
RNF4-221ENST00000513643 SCGB1D1O95968 90 aa5.52□□□□□ -1.53
RNF4-221ENST00000513643 LINC01547P58512 204 aaPredicted RBP5.51□□□□□ -1.53
RNF4-221ENST00000513643 MOBPQ13875 183 aa5.51□□□□□ -1.53
RNF4-221ENST00000513643 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
RNF4-221ENST00000513643 RETNLBQ9BQ08 111 aa5.51□□□□□ -1.53
RNF4-221ENST00000513643 IGLV5-48A0A075B6I7 105 aa5.5□□□□□ -1.53
RNF4-221ENST00000513643 A0A1B0GWB2 263 aa5.5□□□□□ -1.53
RNF4-221ENST00000513643 A4D1N5 150 aa5.5□□□□□ -1.53
RNF4-221ENST00000513643 A6NDN8 102 aa5.5□□□□□ -1.53
RNF4-221ENST00000513643 SMIM11BQ8TCY0 68 aa5.5□□□□□ -1.53
RNF4-221ENST00000513643 IGLV9-49A0A0B4J1Y8 123 aa5.49□□□□□ -1.53
RNF4-221ENST00000513643 FP248Q71RG6 208 aaPredicted RBP5.49□□□□□ -1.53
RNF4-221ENST00000513643 SMIM29Q86T20 159 aa5.49□□□□□ -1.53
RNF4-221ENST00000513643 IGLV7-46A0A075B6I9 117 aa5.48□□□□□ -1.53
RNF4-221ENST00000513643 Q8N377 158 aa5.48□□□□□ -1.53
RNF4-221ENST00000513643 HIGD1BQ9P298 99 aa5.48□□□□□ -1.53
RNF4-221ENST00000513643 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
RNF4-221ENST00000513643 TEX49A0A1B0GTD5 131 aa5.47□□□□□ -1.53
RNF4-221ENST00000513643 C2orf91Q6ZV80 131 aa5.47□□□□□ -1.53
RNF4-221ENST00000513643 C14orf144Q96I85 54 aa5.47□□□□□ -1.53
RNF4-221ENST00000513643 SLC25A34Q6PIV7 304 aa5.46□□□□□ -1.54
RNF4-221ENST00000513643 KRTAP13-3Q3SY46 172 aa5.45□□□□□ -1.54
RNF4-221ENST00000513643 SPATA45Q537H7 98 aa5.45□□□□□ -1.54
RNF4-221ENST00000513643 LINC00575Q6W349 94 aa5.45□□□□□ -1.54
RNF4-221ENST00000513643 HIST1H4GQ99525 98 aa5.45□□□□□ -1.54
RNF4-221ENST00000513643 LAMTOR3Q9UHA4 124 aa5.45□□□□□ -1.54
RNF4-221ENST00000513643 PAM16Q9Y3D7 125 aa5.45□□□□□ -1.54
RNF4-221ENST00000513643 SLC25A20O43772 301 aa5.44□□□□□ -1.54
RNF4-221ENST00000513643 CFC1BP0CG36 223 aa5.44□□□□□ -1.54
RNF4-221ENST00000513643 CFC1P0CG37 223 aa5.44□□□□□ -1.54
RNF4-221ENST00000513643 TAL2Q16559 108 aa5.44□□□□□ -1.54
RNF4-221ENST00000513643 PYY3Q5JQD4 70 aa5.44□□□□□ -1.54
RNF4-221ENST00000513643 CD164Q04900 197 aa5.43□□□□□ -1.54
RNF4-221ENST00000513643 C9orf153Q5TBE3 101 aa5.43□□□□□ -1.54
RNF4-221ENST00000513643 Q5XG85 94 aa5.43□□□□□ -1.54
RNF4-221ENST00000513643 VAMP8Q9BV40 100 aa5.43□□□□□ -1.54
RNF4-221ENST00000513643 NHP2Q9NX24 153 aaKnown RBP5.43□□□□□ -1.54
RNF4-221ENST00000513643 VAMP3Q15836 100 aa5.42□□□□□ -1.54
RNF4-221ENST00000513643 DEFB105AQ8NG35 78 aa5.42□□□□□ -1.54
RNF4-221ENST00000513643 A0A0B4J2C4 111 aa5.41□□□□□ -1.54
RNF4-221ENST00000513643 GHRHP01286 108 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms