RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 NBEAQ8NFP9 2946 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 LRRK2Q5S007 2527 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 SVEP1Q4LDE5 3571 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 CLIP1P30622 1438 aa-0.3□□□□□ -2.46
TRAPPC11-210ENST00000513600 A0A0C4DFX4 3053 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 EPRSP07814 1512 aaKnown RBP-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 CUX1P39880 1505 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 DNHD1Q96M86 4753 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 D6R8Y8 96 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 F8WEM9 126 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 SPRR2AP35326 72 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 FAUP35544 74 aaKnown RBP-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 NCMAPQ5T1S8 102 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 MUSTN1Q8IVN3 82 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 C9orf62Q8N4C0 152 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 CELSR3Q9NYQ7 3312 aa-0.31□□□□□ -2.46
TRAPPC11-210ENST00000513600 MON2Q7Z3U7 1717 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 C5P01031 1676 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 M0R143 59 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 LEPROTL1O95214 131 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 IGLC2P0DOY2 106 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 IGLC3P0DOY3 106 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 KRTAP20-1Q3LI63 56 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 HIGD1BQ9P298 99 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 CDKN2A-AS1Q9UH64 79 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 DNAH3Q8TD57 4116 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 FAT3Q8TDW7 4589 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 SRCAPQ6ZRS2 3230 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 PKD1P98161 4303 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 MYH4Q9Y623 1939 aa-0.32□□□□□ -2.46
TRAPPC11-210ENST00000513600 KIF20BQ96Q89 1820 aa-0.33□□□□□ -2.46
TRAPPC11-210ENST00000513600 FANCAO15360 1455 aa-0.33□□□□□ -2.46
TRAPPC11-210ENST00000513600 CCDC168Q8NDH2 2452 aa-0.33□□□□□ -2.46
TRAPPC11-210ENST00000513600 HEPN1Q6WQI6 88 aa-0.33□□□□□ -2.46
TRAPPC11-210ENST00000513600 UBE2D4Q9Y2X8 147 aa-0.33□□□□□ -2.46
TRAPPC11-210ENST00000513600 VPS8Q8N3P4 1428 aa-0.33□□□□□ -2.46
TRAPPC11-210ENST00000513600 PKD1L2Q7Z442 2459 aa-0.33□□□□□ -2.46
TRAPPC11-210ENST00000513600 DEFB112Q30KQ8 113 aa-0.34□□□□□ -2.46
TRAPPC11-210ENST00000513600 KRTAP6-2Q3LI66 62 aa-0.34□□□□□ -2.46
TRAPPC11-210ENST00000513600 COL14A1Q05707 1796 aaKnown RBP-0.34□□□□□ -2.46
TRAPPC11-210ENST00000513600 ACACAQ13085 2346 aa-0.35□□□□□ -2.46
TRAPPC11-210ENST00000513600 ATP10BO94823 1461 aa-0.35□□□□□ -2.46
TRAPPC11-210ENST00000513600 ABCC10Q5T3U5 1492 aa-0.35□□□□□ -2.46
TRAPPC11-210ENST00000513600 CRYBG1Q9Y4K1 1723 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 GYPAP02724 150 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 S100A8P05109 93 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 SMIM11AP58511 58 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 NMSQ5H8A3 153 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 LELP1Q5T871 98 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 CLTCQ00610 1675 aaKnown RBP-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 HTTP42858 3142 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 ZZEF1O43149 2961 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 UBR3Q6ZT12 1888 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 FAM186AA6NE01 2351 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 MAGI2Q86UL8 1455 aa-0.35□□□□□ -2.47
TRAPPC11-210ENST00000513600 LAMA1P25391 3075 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 DNAH2Q9P225 4427 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 MYO9AB2RTY4 2548 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 BCORQ6W2J9 1755 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 KALRNO60229 2985 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 HMGN2P05204 90 aaKnown RBP-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 SPRR2EP22531 72 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 COX7BP24311 80 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 PKIAP61925 76 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 COX6B2Q6YFQ2 88 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 WFDC13Q8IUB5 93 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 SNHG12Q9BXW3 62 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 DNAH6Q9C0G6 4158 aa-0.36□□□□□ -2.47
TRAPPC11-210ENST00000513600 ANK3Q12955 4377 aaKnown RBP-0.37□□□□□ -2.47
TRAPPC11-210ENST00000513600 MUC17Q685J3 4493 aa-0.37□□□□□ -2.47
TRAPPC11-210ENST00000513600 PKHD1L1Q86WI1 4243 aa-0.37□□□□□ -2.47
TRAPPC11-210ENST00000513600 PLECQ15149 4684 aaKnown RBP-0.37□□□□□ -2.47
TRAPPC11-210ENST00000513600 PTPN23Q9H3S7 1636 aa-0.37□□□□□ -2.47
TRAPPC11-210ENST00000513600 PLGLAQ15195 96 aa-0.37□□□□□ -2.47
TRAPPC11-210ENST00000513600 C20orf78Q9BR46 151 aa-0.37□□□□□ -2.47
TRAPPC11-210ENST00000513600 TROQ12816 1431 aaPredicted RBP-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 LAMA3Q16787 3333 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 DNAH9Q9NYC9 4486 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 QSER1Q2KHR3 1735 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 PKD1L3Q7Z443 1732 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 A0A1B0GUT8 65 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 RPL38P63173 70 aaKnown RBP-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 PEA15Q15121 130 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 ATP7BP35670 1465 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 ADAMTS12P58397 1594 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 CEP290O15078 2479 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 ATMQ13315 3056 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 ANKRD26Q9UPS8 1709 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 CEP162Q5TB80 1403 aa-0.38□□□□□ -2.47
TRAPPC11-210ENST00000513600 CUBNO60494 3623 aa-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 RGPD2P0DJD1 1756 aa-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 TLN1Q9Y490 2541 aaKnown RBP-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 H0YGG7 62 aa-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 CYB5AP00167 134 aa-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 GAFA1Q96PS6 74 aa-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 DMXL1Q9Y485 3027 aa-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 CICQ96RK0 1608 aaPredicted RBP-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 ALKQ9UM73 1620 aa-0.39□□□□□ -2.47
TRAPPC11-210ENST00000513600 RGPD8O14715 1765 aaPredicted RBP-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms