RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 A4D1N5 150 aa12.72□□□□□ -0.37
NEIL3-202ENST00000513321 KRTAP4-16G5E9R7 235 aaPredicted RBP12.72□□□□□ -0.37
NEIL3-202ENST00000513321 MYCBP2O75592 4640 aa12.72□□□□□ -0.37
NEIL3-202ENST00000513321 ETDCA0A1B0GVM5 59 aa12.71□□□□□ -0.38
NEIL3-202ENST00000513321 A6NDN8 102 aa12.7□□□□□ -0.38
NEIL3-202ENST00000513321 OXTP01178 125 aa12.7□□□□□ -0.38
NEIL3-202ENST00000513321 CBY1Q9Y3M2 126 aa12.7□□□□□ -0.38
NEIL3-202ENST00000513321 KRTAP29-1A8MX34 341 aaPredicted RBP12.69□□□□□ -0.38
NEIL3-202ENST00000513321 SMIM6P0DI80 62 aa12.69□□□□□ -0.38
NEIL3-202ENST00000513321 ZNF73O43830 326 aaPredicted RBP12.67□□□□□ -0.38
NEIL3-202ENST00000513321 UQCR10Q9UDW1 63 aa12.67□□□□□ -0.38
NEIL3-202ENST00000513321 TRAV13-2A0A0B4J235 113 aa12.67□□□□□ -0.38
NEIL3-202ENST00000513321 B5MCH6 92 aa12.67□□□□□ -0.38
NEIL3-202ENST00000513321 LRP1Q07954 4544 aaKnown RBP12.66□□□□□ -0.38
NEIL3-202ENST00000513321 HIGD2AQ9BW72 106 aa12.66□□□□□ -0.38
NEIL3-202ENST00000513321 TAL2Q16559 108 aa12.65□□□□□ -0.38
NEIL3-202ENST00000513321 LINC01600Q96MT4 127 aa12.64□□□□□ -0.39
NEIL3-202ENST00000513321 C12orf57Q99622 126 aa12.63□□□□□ -0.39
NEIL3-202ENST00000513321 J3QL48 77 aa12.62□□□□□ -0.39
NEIL3-202ENST00000513321 CEND1Q8N111 149 aa12.62□□□□□ -0.39
NEIL3-202ENST00000513321 PRO1933Q9H354 126 aa12.62□□□□□ -0.39
NEIL3-202ENST00000513321 FAT3Q8TDW7 4589 aa12.62□□□□□ -0.39
NEIL3-202ENST00000513321 KRTAP1-4P0C5Y4 121 aa12.62□□□□□ -0.39
NEIL3-202ENST00000513321 HINT1P49773 126 aaPredicted RBP12.62□□□□□ -0.39
NEIL3-202ENST00000513321 Q6ZRX8 168 aa12.62□□□□□ -0.39
NEIL3-202ENST00000513321 C6orf99Q4VX62 202 aa12.6□□□□□ -0.39
NEIL3-202ENST00000513321 SMCR5Q8TEV8 140 aa12.6□□□□□ -0.39
NEIL3-202ENST00000513321 CFC1BP0CG36 223 aa12.58□□□□□ -0.4
NEIL3-202ENST00000513321 CFC1P0CG37 223 aa12.58□□□□□ -0.4
NEIL3-202ENST00000513321 SMIM11BQ8TCY0 68 aa12.58□□□□□ -0.4
NEIL3-202ENST00000513321 Q9BRP9 147 aa12.58□□□□□ -0.4
NEIL3-202ENST00000513321 HSD52Q0P140 79 aa12.57□□□□□ -0.4
NEIL3-202ENST00000513321 MT1HL1P0DM35 61 aa12.57□□□□□ -0.4
NEIL3-202ENST00000513321 RPL13AP40429 203 aaKnown RBP12.56□□□□□ -0.4
NEIL3-202ENST00000513321 FXYD2P54710 66 aa12.56□□□□□ -0.4
NEIL3-202ENST00000513321 ERC2-IT1O76042 136 aa12.55□□□□□ -0.4
NEIL3-202ENST00000513321 COX7BP24311 80 aa12.55□□□□□ -0.4
NEIL3-202ENST00000513321 PRR26Q8N8Z3 221 aa12.55□□□□□ -0.4
NEIL3-202ENST00000513321 TMEM238LA0A1B0GVL6 79 aa12.54□□□□□ -0.4
NEIL3-202ENST00000513321 A6NJY4 79 aa12.54□□□□□ -0.4
NEIL3-202ENST00000513321 ELOF1P60002 83 aaKnown RBP12.54□□□□□ -0.4
NEIL3-202ENST00000513321 KRTAP10-8P60410 259 aa12.54□□□□□ -0.4
NEIL3-202ENST00000513321 RAB37Q96AX2 223 aa12.54□□□□□ -0.4
NEIL3-202ENST00000513321 ANAPC11Q9NYG5 84 aa12.54□□□□□ -0.4
NEIL3-202ENST00000513321 TRBV7-6A0A0J9YX20 115 aa12.53□□□□□ -0.4
NEIL3-202ENST00000513321 DMBT1Q9UGM3 2413 aaPredicted RBP12.53□□□□□ -0.4
NEIL3-202ENST00000513321 A0A0B4J2C4 111 aa12.52□□□□□ -0.4
NEIL3-202ENST00000513321 SPRR4Q96PI1 79 aa12.52□□□□□ -0.41
NEIL3-202ENST00000513321 ZNF706Q9Y5V0 76 aaPredicted RBP12.51□□□□□ -0.41
NEIL3-202ENST00000513321 A0A1B0GWB2 263 aa12.5□□□□□ -0.41
NEIL3-202ENST00000513321 H7C2G1 150 aa12.5□□□□□ -0.41
NEIL3-202ENST00000513321 DHRS4-AS1Q9P1J3 65 aa12.5□□□□□ -0.41
NEIL3-202ENST00000513321 CRYGAP11844 174 aa12.48□□□□□ -0.41
NEIL3-202ENST00000513321 A0A087X002 238 aa12.47□□□□□ -0.41
NEIL3-202ENST00000513321 VAMP3Q15836 100 aa12.47□□□□□ -0.41
NEIL3-202ENST00000513321 FAM229BQ4G0N7 80 aa12.47□□□□□ -0.41
NEIL3-202ENST00000513321 PRO1854Q9UHT4 67 aa12.47□□□□□ -0.41
NEIL3-202ENST00000513321 NHP2Q9NX24 153 aaKnown RBP12.47□□□□□ -0.41
NEIL3-202ENST00000513321 TSTD3H0UI37 97 aa12.46□□□□□ -0.42
NEIL3-202ENST00000513321 CTAG1AP78358 180 aa12.46□□□□□ -0.42
NEIL3-202ENST00000513321 BVES-AS1Q5T3Y7 98 aa12.45□□□□□ -0.42
NEIL3-202ENST00000513321 GAGE2AQ6NT46 116 aa12.45□□□□□ -0.42
NEIL3-202ENST00000513321 ST20-AS1Q8NBB2 130 aa12.44□□□□□ -0.42
NEIL3-202ENST00000513321 TNXBP22105 4242 aa12.43□□□□□ -0.42
NEIL3-202ENST00000513321 KRTAP13-2Q52LG2 175 aa12.42□□□□□ -0.42
NEIL3-202ENST00000513321 LINC00483Q53H64 154 aa12.42□□□□□ -0.42
NEIL3-202ENST00000513321 K7ERJ3 54 aa12.41□□□□□ -0.42
NEIL3-202ENST00000513321 Q1RN00 199 aa12.41□□□□□ -0.42
NEIL3-202ENST00000513321 TYMSOSQ8TAI1 123 aa12.4□□□□□ -0.42
NEIL3-202ENST00000513321 LINC00575Q6W349 94 aa12.39□□□□□ -0.43
NEIL3-202ENST00000513321 SLC25A20O43772 301 aa12.38□□□□□ -0.43
NEIL3-202ENST00000513321 M0R143 59 aa12.37□□□□□ -0.43
NEIL3-202ENST00000513321 C3orf22Q8N5N4 141 aa12.37□□□□□ -0.43
NEIL3-202ENST00000513321 DEFB105AQ8NG35 78 aa12.35□□□□□ -0.43
NEIL3-202ENST00000513321 hADV29S1A0JD25 119 aa12.34□□□□□ -0.43
NEIL3-202ENST00000513321 H0YGX0 51 aa12.33□□□□□ -0.44
NEIL3-202ENST00000513321 SPRR1BP22528 89 aa12.33□□□□□ -0.44
NEIL3-202ENST00000513321 HERC1Q15751 4861 aa12.32□□□□□ -0.44
NEIL3-202ENST00000513321 TRIAP1O43715 76 aa12.31□□□□□ -0.44
NEIL3-202ENST00000513321 TSPAN13O95857 204 aa12.31□□□□□ -0.44
NEIL3-202ENST00000513321 IGLV9-49A0A0B4J1Y8 123 aa12.3□□□□□ -0.44
NEIL3-202ENST00000513321 TEX49A0A1B0GTD5 131 aa12.3□□□□□ -0.44
NEIL3-202ENST00000513321 PSMB2P49721 201 aa12.3□□□□□ -0.44
NEIL3-202ENST00000513321 IGLV5-48A0A075B6I7 105 aa12.29□□□□□ -0.44
NEIL3-202ENST00000513321 LINC01547P58512 204 aaPredicted RBP12.29□□□□□ -0.44
NEIL3-202ENST00000513321 Q6ZQY7 126 aa12.28□□□□□ -0.44
NEIL3-202ENST00000513321 FAM218AQ96MZ4 157 aa12.27□□□□□ -0.44
NEIL3-202ENST00000513321 MOBPQ13875 183 aa12.27□□□□□ -0.45
NEIL3-202ENST00000513321 SNCGO76070 127 aa12.26□□□□□ -0.45
NEIL3-202ENST00000513321 Q8N377 158 aa12.26□□□□□ -0.45
NEIL3-202ENST00000513321 LAMTOR3Q9UHA4 124 aa12.26□□□□□ -0.45
NEIL3-202ENST00000513321 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.25□□□□□ -0.45
NEIL3-202ENST00000513321 COX6CP09669 75 aa12.24□□□□□ -0.45
NEIL3-202ENST00000513321 SSBP3-AS1Q7Z2R9 100 aa12.24□□□□□ -0.45
NEIL3-202ENST00000513321 LINC00304Q8N9R0 145 aa12.24□□□□□ -0.45
NEIL3-202ENST00000513321 BATFQ16520 125 aa12.23□□□□□ -0.45
NEIL3-202ENST00000513321 C9orf153Q5TBE3 101 aa12.23□□□□□ -0.45
NEIL3-202ENST00000513321 SMIM29Q86T20 159 aa12.23□□□□□ -0.45
NEIL3-202ENST00000513321 PCP4L1A6NKN8 68 aa12.22□□□□□ -0.45
NEIL3-202ENST00000513321 Q8NBF4 154 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms