RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 WFDC10AQ9H1F0 79 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 SORL1Q92673 2214 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 TRBV10-3A0A0K0K1G6 114 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 SDHAF1A6NFY7 115 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 CHKB-CPT1BH3BT56 60 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 NDUFA4O00483 81 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 RHPN1-AS1Q9BWJ2 59 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 CDC42SE1Q9NRR8 79 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 UBE2D4Q9Y2X8 147 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 PRKDCP78527 4128 aaKnown RBP3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 STAB2Q8WWQ8 2551 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 IGKV1D-37A0A075B6S9 117 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 RPL36AP83881 106 aaKnown RBP3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 NTM-AS1Q6ZSK4 140 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 TENM3Q9P273 2699 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 TRAV7A0A075B6U4 112 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 IGKV3D-7A0A0C4DH55 119 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 MIFP14174 115 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 KLK9Q2XQG4 91 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 DEFB114Q30KQ6 69 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 ATP5EP2Q5VTU8 51 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 MIR7-3HGQ8N6C7 128 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 KLK9Q9UKQ9 250 aa3.32□□□□□ -1.88
TRAPPC11-208ENST00000511955 IGLV2-18A0A075B6J9 118 aa3.31□□□□□ -1.88
TRAPPC11-208ENST00000511955 A0A087WVE0 104 aa3.31□□□□□ -1.88
TRAPPC11-208ENST00000511955 K7EIL1 84 aa3.31□□□□□ -1.88
TRAPPC11-208ENST00000511955 MOBPQ13875 183 aa3.31□□□□□ -1.88
TRAPPC11-208ENST00000511955 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
TRAPPC11-208ENST00000511955 DNAL4O96015 105 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 DEFB1P60022 68 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 Q5VV11 94 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 IGFL4Q6B9Z1 124 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 A8MUU9 505 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 M0R3E3 92 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 IGKV3-20P01619 116 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 C10orf113Q5VZT2 155 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 Q6ZTC4 211 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 MUSTN1Q8IVN3 82 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 C15orf56Q8N910 161 aa3.3□□□□□ -1.88
TRAPPC11-208ENST00000511955 DNAH10OSP0CZ25 163 aa3.29□□□□□ -1.88
TRAPPC11-208ENST00000511955 KPRPQ5T749 579 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-208ENST00000511955 C14orf178Q8N769 122 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-208ENST00000511955 DNAH3Q8TD57 4116 aa3.29□□□□□ -1.88
TRAPPC11-208ENST00000511955 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
TRAPPC11-208ENST00000511955 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC11-208ENST00000511955 C11orf86A6NJI1 115 aa3.28□□□□□ -1.88
TRAPPC11-208ENST00000511955 I3L3M4 83 aa3.28□□□□□ -1.88
TRAPPC11-208ENST00000511955 DEFB131AP59861 70 aa3.28□□□□□ -1.88
TRAPPC11-208ENST00000511955 MUC7Q8TAX7 377 aa3.28□□□□□ -1.88
TRAPPC11-208ENST00000511955 A0A0J9YX75 114 aa3.28□□□□□ -1.88
TRAPPC11-208ENST00000511955 Q8N1X5 172 aa3.28□□□□□ -1.88
TRAPPC11-208ENST00000511955 AMELXQ99217 191 aa3.28□□□□□ -1.88
TRAPPC11-208ENST00000511955 IGLV2-11P01706 119 aa3.27□□□□□ -1.89
TRAPPC11-208ENST00000511955 SMIM29Q86T20 159 aa3.27□□□□□ -1.89
TRAPPC11-208ENST00000511955 LIMD2Q9BT23 127 aa3.27□□□□□ -1.89
TRAPPC11-208ENST00000511955 TENM2Q9NT68 2774 aa3.27□□□□□ -1.89
TRAPPC11-208ENST00000511955 TRAV23DV6A0A075B6W5 121 aa3.27□□□□□ -1.89
TRAPPC11-208ENST00000511955 BAALC-AS2P0C853 105 aa3.27□□□□□ -1.89
TRAPPC11-208ENST00000511955 H3BPC8 53 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 H3BRN7 92 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 CNFNQ9BYD5 112 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 TRAV12-3A0A0B4J271 114 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 IGIPA6NJ69 53 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 DEFB135Q30KP9 77 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 C16orf74Q96GX8 76 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 C20orf166-AS1Q96NR2 134 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 C14orf132Q9NPU4 83 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 LINC00846Q9NV44 126 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 SNURFQ9Y675 71 aa3.26□□□□□ -1.89
TRAPPC11-208ENST00000511955 IGLV4-69A0A075B6H9 119 aa3.25□□□□□ -1.89
TRAPPC11-208ENST00000511955 CRIP1P50238 77 aa3.25□□□□□ -1.89
TRAPPC11-208ENST00000511955 Q8N377 158 aa3.25□□□□□ -1.89
TRAPPC11-208ENST00000511955 SMIM2Q9BVW6 85 aa3.25□□□□□ -1.89
TRAPPC11-208ENST00000511955 DEFB4AO15263 64 aa3.25□□□□□ -1.89
TRAPPC11-208ENST00000511955 GAS8-AS1O95177 125 aa3.25□□□□□ -1.89
TRAPPC11-208ENST00000511955 P0C880 135 aa3.25□□□□□ -1.89
TRAPPC11-208ENST00000511955 C22orf24Q9Y442 160 aa3.25□□□□□ -1.89
TRAPPC11-208ENST00000511955 HTN1P15515 57 aa3.24□□□□□ -1.89
TRAPPC11-208ENST00000511955 Q8TAT8 98 aa3.24□□□□□ -1.89
TRAPPC11-208ENST00000511955 TMEM14CQ9P0S9 112 aa3.24□□□□□ -1.89
TRAPPC11-208ENST00000511955 CSMD3Q7Z407 3707 aa3.23□□□□□ -1.89
TRAPPC11-208ENST00000511955 IGKV2-40A0A087WW87 121 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC11-208ENST00000511955 ERC2-IT1O76042 136 aa3.23□□□□□ -1.89
TRAPPC11-208ENST00000511955 IGKV2D-40P01614 121 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC11-208ENST00000511955 SPINK13Q1W4C9 94 aa3.23□□□□□ -1.89
TRAPPC11-208ENST00000511955 OBSCN-AS1Q96MR7 158 aa3.23□□□□□ -1.89
TRAPPC11-208ENST00000511955 DNAH9Q9NYC9 4486 aa3.23□□□□□ -1.89
TRAPPC11-208ENST00000511955 LYPD1Q8N2G4 141 aa3.22□□□□□ -1.89
TRAPPC11-208ENST00000511955 TMEM254Q8TBM7 123 aa3.22□□□□□ -1.89
TRAPPC11-208ENST00000511955 CDC42SE2Q9NRR3 84 aa3.22□□□□□ -1.89
TRAPPC11-208ENST00000511955 TRAV10A0A0B4J240 114 aa3.22□□□□□ -1.89
TRAPPC11-208ENST00000511955 TRBV7-4A0A0J9YYF1 115 aa3.22□□□□□ -1.89
TRAPPC11-208ENST00000511955 H3BQ85 93 aa3.22□□□□□ -1.89
TRAPPC11-208ENST00000511955 GIG44P09565 113 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC11-208ENST00000511955 CSAG1Q6PB30 78 aa3.22□□□□□ -1.89
TRAPPC11-208ENST00000511955 LITAFQ99732 161 aa3.22□□□□□ -1.89
TRAPPC11-208ENST00000511955 ENHOQ6UWT2 76 aa3.21□□□□□ -1.89
TRAPPC11-208ENST00000511955 HUWE1Q7Z6Z7 4374 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms