RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 IFI6P09912 130 aa-0.16□□□□□ -2.44
TRAPPC11-207ENST00000511409 KRTAP19-7Q3SYF9 63 aa-0.16□□□□□ -2.44
TRAPPC11-207ENST00000511409 CSMD3Q7Z407 3707 aa-0.16□□□□□ -2.44
TRAPPC11-207ENST00000511409 ITPR3Q14573 2671 aa-0.16□□□□□ -2.44
TRAPPC11-207ENST00000511409 CNOT1A5YKK6 2376 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 KIF20BQ96Q89 1820 aa-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 H3BUT2 72 aa-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 FLNBO75369 2602 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 SMIM13P0DJ93 91 aa-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 SPRR2AP35326 72 aa-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 ATRQ13535 2644 aa-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 ATP5EP2Q5VTU8 51 aa-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 CRYBG1Q9Y4K1 1723 aa-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 AKAP13Q12802 2813 aa-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 HSPG2P98160 4391 aa-0.17□□□□□ -2.44
TRAPPC11-207ENST00000511409 HIVEP1P15822 2718 aa-0.18□□□□□ -2.44
TRAPPC11-207ENST00000511409 DEFA5Q01523 94 aa-0.18□□□□□ -2.44
TRAPPC11-207ENST00000511409 DEFB121Q5J5C9 76 aa-0.18□□□□□ -2.44
TRAPPC11-207ENST00000511409 PCNX1Q96RV3 2341 aa-0.18□□□□□ -2.44
TRAPPC11-207ENST00000511409 MYO18BQ8IUG5 2567 aa-0.18□□□□□ -2.44
TRAPPC11-207ENST00000511409 TEP1Q99973 2627 aaKnown RBP-0.18□□□□□ -2.44
TRAPPC11-207ENST00000511409 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 COL14A1Q05707 1796 aaKnown RBP-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 H3BNG1 76 aa-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 NDUFA4O00483 81 aa-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 NREPQ16612 68 aa-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 KRTAP6-2Q3LI66 62 aa-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 NCOA2Q15596 1464 aa-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 KIAA1551Q9HCM1 1747 aa-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 URB2Q14146 1524 aaKnown RBP-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 COL6A3P12111 3177 aa-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 RGPD2P0DJD1 1756 aa-0.19□□□□□ -2.44
TRAPPC11-207ENST00000511409 CICQ96RK0 1608 aaPredicted RBP-0.2□□□□□ -2.44
TRAPPC11-207ENST00000511409 FASNP49327 2511 aaKnown RBP-0.2□□□□□ -2.44
TRAPPC11-207ENST00000511409 MYCBP2O75592 4640 aa-0.2□□□□□ -2.44
TRAPPC11-207ENST00000511409 ABCC3O15438 1527 aa-0.2□□□□□ -2.44
TRAPPC11-207ENST00000511409 RGPD8O14715 1765 aaPredicted RBP-0.2□□□□□ -2.44
TRAPPC11-207ENST00000511409 BCORQ6W2J9 1755 aa-0.2□□□□□ -2.44
TRAPPC11-207ENST00000511409 RGPD5Q99666 1765 aa-0.2□□□□□ -2.44
TRAPPC11-207ENST00000511409 TTC37Q6PGP7 1564 aa-0.2□□□□□ -2.44
TRAPPC11-207ENST00000511409 TNXBP22105 4242 aa-0.21□□□□□ -2.44
TRAPPC11-207ENST00000511409 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.21□□□□□ -2.44
TRAPPC11-207ENST00000511409 C9orf92A6NGG3 77 aa-0.21□□□□□ -2.44
TRAPPC11-207ENST00000511409 MRPL33O75394 65 aaKnown RBP-0.21□□□□□ -2.44
TRAPPC11-207ENST00000511409 LRP2P98164 4655 aa-0.21□□□□□ -2.44
TRAPPC11-207ENST00000511409 SPTBN4Q9H254 2564 aa-0.21□□□□□ -2.44
TRAPPC11-207ENST00000511409 HECTD1Q9ULT8 2610 aa-0.21□□□□□ -2.44
TRAPPC11-207ENST00000511409 AKAP12Q02952 1782 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 SPG11Q96JI7 2443 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 RIF1Q5UIP0 2472 aaKnown RBP-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 PRRC2CQ9Y520 2896 aaKnown RBP-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 LPAP08519 4548 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 DEFB130BP0DP73 79 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 DEFB130AP0DP74 79 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 SPRR2EP22531 72 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 BVES-AS1Q5T3Y7 98 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 C18orf32Q8TCD1 76 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 PKD1L3Q7Z443 1732 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 ANKRD26Q9UPS8 1709 aa-0.22□□□□□ -2.44
TRAPPC11-207ENST00000511409 KMT2CQ8NEZ4 4911 aaKnown RBP-0.22□□□□□ -2.45
TRAPPC11-207ENST00000511409 HERC1Q15751 4861 aa-0.22□□□□□ -2.45
TRAPPC11-207ENST00000511409 PCLOQ9Y6V0 5065 aa-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 MYO3AQ8NEV4 1616 aa-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 PTPN23Q9H3S7 1636 aa-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 HECTD4Q9Y4D8 3996 aa-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 USP9XQ93008 2570 aaPredicted RBP-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 DEFB131BA0A096LNP1 70 aa-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 LCE6AA0A183 80 aa-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 LYNX1G3V0Z9 82 aa-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 KRTAP19-8Q3LI54 63 aa-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 KMT2AQ03164 3969 aa-0.23□□□□□ -2.45
TRAPPC11-207ENST00000511409 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 RGPD4Q7Z3J3 1758 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 H3BVH4 76 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 PRLHP81277 87 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 UBL5Q9BZL1 73 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 LAMA5O15230 3695 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 ZFHX3Q15911 3703 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 USP32Q8NFA0 1604 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 ALKQ9UM73 1620 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 PREX1Q8TCU6 1659 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 RGPD1P0DJD0 1748 aa-0.24□□□□□ -2.45
TRAPPC11-207ENST00000511409 FAT1Q14517 4588 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 USH2AO75445 5202 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 KNL1Q8NG31 2342 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 H0YAA0 97 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 MT1AP04731 61 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 IAPPP10997 89 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 CRIP1P50238 77 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 ADAMTS12P58397 1594 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 KIF14Q15058 1648 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 QSER1Q2KHR3 1735 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 RGPD3A6NKT7 1758 aaPredicted RBP-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 PDE4DIPQ5VU43 2346 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 SONP18583 2426 aaKnown RBP-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 TEX15Q9BXT5 2789 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 TACC2O95359 2948 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 HERC2O95714 4834 aa-0.25□□□□□ -2.45
TRAPPC11-207ENST00000511409 WDR87Q6ZQQ6 2873 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms