RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 ERC2-IT1O76042 136 aa10.72□□□□□ -0.69
LSM6-206ENST00000510331 Q6ZRX8 168 aa10.72□□□□□ -0.69
LSM6-206ENST00000510331 Q9BRP9 147 aa10.72□□□□□ -0.69
LSM6-206ENST00000510331 LINC00308Q8TCZ7 52 aa10.71□□□□□ -0.69
LSM6-206ENST00000510331 TIMM17BO60830 172 aa10.7□□□□□ -0.7
LSM6-206ENST00000510331 LINC00483Q53H64 154 aa10.69□□□□□ -0.7
LSM6-206ENST00000510331 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
LSM6-206ENST00000510331 SPANXCQ9NY87 97 aa10.68□□□□□ -0.7
LSM6-206ENST00000510331 C20orf202A1L168 122 aa10.67□□□□□ -0.7
LSM6-206ENST00000510331 ZNF73O43830 326 aaPredicted RBP10.67□□□□□ -0.7
LSM6-206ENST00000510331 ANKRD39Q53RE8 183 aa10.67□□□□□ -0.7
LSM6-206ENST00000510331 ATOH7Q8N100 152 aa10.67□□□□□ -0.7
LSM6-206ENST00000510331 Q8NBF4 154 aa10.67□□□□□ -0.7
LSM6-206ENST00000510331 IGLV9-49A0A0B4J1Y8 123 aa10.63□□□□□ -0.71
LSM6-206ENST00000510331 MOBPQ13875 183 aa10.63□□□□□ -0.71
LSM6-206ENST00000510331 MUC2Q02817 5179 aa10.63□□□□□ -0.71
LSM6-206ENST00000510331 CTAG1AP78358 180 aa10.62□□□□□ -0.71
LSM6-206ENST00000510331 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
LSM6-206ENST00000510331 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
LSM6-206ENST00000510331 OR13C6PQ8NH95 151 aa10.62□□□□□ -0.71
LSM6-206ENST00000510331 SCGB1D4Q6XE38 83 aa10.61□□□□□ -0.71
LSM6-206ENST00000510331 ST20-AS1Q8NBB2 130 aa10.6□□□□□ -0.71
LSM6-206ENST00000510331 SPANXDQ9BXN6 97 aa10.6□□□□□ -0.71
LSM6-206ENST00000510331 IGLV7-46A0A075B6I9 117 aa10.59□□□□□ -0.71
LSM6-206ENST00000510331 PCP2Q8IVA1 136 aa10.59□□□□□ -0.71
LSM6-206ENST00000510331 C4orf48Q5BLP8 95 aa10.58□□□□□ -0.72
LSM6-206ENST00000510331 HIST3H2BBQ8N257 126 aa10.58□□□□□ -0.72
LSM6-206ENST00000510331 CBY1Q9Y3M2 126 aa10.58□□□□□ -0.72
LSM6-206ENST00000510331 TPRXLQ17RH7 258 aa10.57□□□□□ -0.72
LSM6-206ENST00000510331 HIST1H2BLQ99880 126 aa10.56□□□□□ -0.72
LSM6-206ENST00000510331 S100A1P23297 94 aa10.55□□□□□ -0.72
LSM6-206ENST00000510331 HINT1P49773 126 aaPredicted RBP10.55□□□□□ -0.72
LSM6-206ENST00000510331 C9orf153Q5TBE3 101 aa10.54□□□□□ -0.72
LSM6-206ENST00000510331 SPINK1P00995 79 aa10.53□□□□□ -0.72
LSM6-206ENST00000510331 C6orf99Q4VX62 202 aa10.53□□□□□ -0.72
LSM6-206ENST00000510331 LINC00518Q8N0U6 118 aa10.53□□□□□ -0.72
LSM6-206ENST00000510331 S100A2P29034 98 aa10.52□□□□□ -0.73
LSM6-206ENST00000510331 AKR1D1P51857 326 aa10.52□□□□□ -0.73
LSM6-206ENST00000510331 ELOF1P60002 83 aaKnown RBP10.52□□□□□ -0.73
LSM6-206ENST00000510331 CDIP1Q9H305 208 aa10.52□□□□□ -0.73
LSM6-206ENST00000510331 COX7BP24311 80 aa10.51□□□□□ -0.73
LSM6-206ENST00000510331 FP248Q71RG6 208 aaPredicted RBP10.51□□□□□ -0.73
LSM6-206ENST00000510331 DHRS4-AS1Q9P1J3 65 aa10.51□□□□□ -0.73
LSM6-206ENST00000510331 MUC17Q685J3 4493 aa10.5□□□□□ -0.73
LSM6-206ENST00000510331 IFITM1P13164 125 aa10.5□□□□□ -0.73
LSM6-206ENST00000510331 SSBP3-AS1Q7Z2R9 100 aa10.5□□□□□ -0.73
LSM6-206ENST00000510331 MUSTN1Q8IVN3 82 aa10.5□□□□□ -0.73
LSM6-206ENST00000510331 COPS9Q8WXC6 57 aa10.5□□□□□ -0.73
LSM6-206ENST00000510331 C5orf52A6NGY3 159 aa10.48□□□□□ -0.73
LSM6-206ENST00000510331 SNRPEP62304 92 aaKnown RBP10.48□□□□□ -0.73
LSM6-206ENST00000510331 Q6ZVH6 145 aa10.48□□□□□ -0.73
LSM6-206ENST00000510331 SPRR1BP22528 89 aa10.47□□□□□ -0.73
LSM6-206ENST00000510331 RPS29P62273 56 aaKnown RBP10.47□□□□□ -0.73
LSM6-206ENST00000510331 Q8N377 158 aa10.47□□□□□ -0.73
LSM6-206ENST00000510331 A6NDN8 102 aa10.46□□□□□ -0.73
LSM6-206ENST00000510331 S100A6P06703 90 aa10.46□□□□□ -0.73
LSM6-206ENST00000510331 KRTAP13-3Q3SY46 172 aa10.44□□□□□ -0.74
LSM6-206ENST00000510331 HSBP1L1C9JCN9 74 aa10.43□□□□□ -0.74
LSM6-206ENST00000510331 TRBV7-6A0A0J9YX20 115 aa10.42□□□□□ -0.74
LSM6-206ENST00000510331 A0A1B0GWB2 263 aa10.42□□□□□ -0.74
LSM6-206ENST00000510331 SLC25A34Q6PIV7 304 aa10.41□□□□□ -0.74
LSM6-206ENST00000510331 SLC25A20O43772 301 aa10.4□□□□□ -0.74
LSM6-206ENST00000510331 Q1RN00 199 aa10.4□□□□□ -0.74
LSM6-206ENST00000510331 DEFB105AQ8NG35 78 aa10.4□□□□□ -0.74
LSM6-206ENST00000510331 FAT4Q6V0I7 4981 aa10.39□□□□□ -0.75
LSM6-206ENST00000510331 TRAV13-2A0A0B4J235 113 aa10.39□□□□□ -0.75
LSM6-206ENST00000510331 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
LSM6-206ENST00000510331 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
LSM6-206ENST00000510331 HRCT1Q6UXD1 115 aa10.38□□□□□ -0.75
LSM6-206ENST00000510331 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
LSM6-206ENST00000510331 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
LSM6-206ENST00000510331 SCGB1D1O95968 90 aa10.37□□□□□ -0.75
LSM6-206ENST00000510331 LINC01547P58512 204 aaPredicted RBP10.37□□□□□ -0.75
LSM6-206ENST00000510331 TAL2Q16559 108 aa10.37□□□□□ -0.75
LSM6-206ENST00000510331 TEX49A0A1B0GTD5 131 aa10.36□□□□□ -0.75
LSM6-206ENST00000510331 A4D1N5 150 aa10.35□□□□□ -0.75
LSM6-206ENST00000510331 IGLV5-48A0A075B6I7 105 aa10.34□□□□□ -0.75
LSM6-206ENST00000510331 A0A0U1RQV1 116 aa10.34□□□□□ -0.75
LSM6-206ENST00000510331 SMIM29Q86T20 159 aa10.34□□□□□ -0.75
LSM6-206ENST00000510331 C12orf57Q99622 126 aa10.32□□□□□ -0.76
LSM6-206ENST00000510331 LIMD2Q9BT23 127 aa10.31□□□□□ -0.76
LSM6-206ENST00000510331 COX8AP10176 69 aa10.3□□□□□ -0.76
LSM6-206ENST00000510331 NHP2Q9NX24 153 aaKnown RBP10.3□□□□□ -0.76
LSM6-206ENST00000510331 A0A0G2JQZ4 141 aa10.29□□□□□ -0.76
LSM6-206ENST00000510331 PRO1933Q9H354 126 aa10.29□□□□□ -0.76
LSM6-206ENST00000510331 HIST1H4GQ99525 98 aa10.28□□□□□ -0.76
LSM6-206ENST00000510331 H7C2G1 150 aa10.27□□□□□ -0.77
LSM6-206ENST00000510331 ASB16-AS1Q495Z4 193 aa10.27□□□□□ -0.77
LSM6-206ENST00000510331 CD164Q04900 197 aa10.25□□□□□ -0.77
LSM6-206ENST00000510331 LINC00575Q6W349 94 aa10.25□□□□□ -0.77
LSM6-206ENST00000510331 VAMP3Q15836 100 aa10.24□□□□□ -0.77
LSM6-206ENST00000510331 XP32Q5T750 250 aa10.24□□□□□ -0.77
LSM6-206ENST00000510331 PAM16Q9Y3D7 125 aa10.24□□□□□ -0.77
LSM6-206ENST00000510331 DLEU1O43261 78 aa10.23□□□□□ -0.77
LSM6-206ENST00000510331 Q6ZQY7 126 aa10.23□□□□□ -0.77
LSM6-206ENST00000510331 C14orf144Q96I85 54 aa10.23□□□□□ -0.77
LSM6-206ENST00000510331 SPATA45Q537H7 98 aa10.22□□□□□ -0.77
LSM6-206ENST00000510331 KRTAP4-1Q9BYQ7 146 aa10.21□□□□□ -0.77
LSM6-206ENST00000510331 hADV29S1A0JD25 119 aa10.2□□□□□ -0.78
LSM6-206ENST00000510331 SEC61BP60468 96 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms