RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 UBL5Q9BZL1 73 aa4.94□□□□□ -1.62
CAST-228ENST00000509903 COL6A5A8TX70 2615 aa4.93□□□□□ -1.62
CAST-228ENST00000509903 ATOX1O00244 68 aa4.93□□□□□ -1.62
CAST-228ENST00000509903 DNAH10OSP0CZ25 163 aa4.93□□□□□ -1.62
CAST-228ENST00000509903 ELOF1P60002 83 aaKnown RBP4.93□□□□□ -1.62
CAST-228ENST00000509903 ATP5EP2Q5VTU8 51 aa4.93□□□□□ -1.62
CAST-228ENST00000509903 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.93□□□□□ -1.62
CAST-228ENST00000509903 DSCR8Q96T75 97 aa4.93□□□□□ -1.62
CAST-228ENST00000509903 TRBV7-6A0A0J9YX20 115 aa4.92□□□□□ -1.62
CAST-228ENST00000509903 PRB2P02812 416 aaPredicted RBP4.92□□□□□ -1.62
CAST-228ENST00000509903 Q6ZQT0 140 aa4.92□□□□□ -1.62
CAST-228ENST00000509903 Q6ZRP5 223 aa4.92□□□□□ -1.62
CAST-228ENST00000509903 PRAC1Q96KF2 57 aa4.92□□□□□ -1.62
CAST-228ENST00000509903 LOC110117498A0A087WWA1 95 aa4.92□□□□□ -1.62
CAST-228ENST00000509903 HIST1H4AP62805 103 aaKnown RBP4.92□□□□□ -1.62
CAST-228ENST00000509903 CMYA5Q8N3K9 4069 aa4.92□□□□□ -1.62
CAST-228ENST00000509903 A0A087WVE0 104 aa4.91□□□□□ -1.62
CAST-228ENST00000509903 UQCRQO14949 82 aa4.91□□□□□ -1.62
CAST-228ENST00000509903 PDE6GP18545 87 aa4.91□□□□□ -1.62
CAST-228ENST00000509903 C3orf22Q8N5N4 141 aa4.91□□□□□ -1.62
CAST-228ENST00000509903 NKAPP1Q8N9T2 125 aa4.91□□□□□ -1.62
CAST-228ENST00000509903 C9orf153Q5TBE3 101 aa4.91□□□□□ -1.62
CAST-228ENST00000509903 MRAPQ8TCY5 172 aa4.91□□□□□ -1.62
CAST-228ENST00000509903 LINC00588Q9Y4M8 146 aa4.91□□□□□ -1.62
CAST-228ENST00000509903 NBEAL1Q6ZS30 2694 aa4.9□□□□□ -1.62
CAST-228ENST00000509903 COX7CP15954 63 aa4.89□□□□□ -1.63
CAST-228ENST00000509903 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
CAST-228ENST00000509903 RMI2Q96E14 147 aa4.89□□□□□ -1.63
CAST-228ENST00000509903 TM2D3Q9BRN9 247 aa4.89□□□□□ -1.63
CAST-228ENST00000509903 DNAH3Q8TD57 4116 aa4.89□□□□□ -1.63
CAST-228ENST00000509903 MGAM2Q2M2H8 2515 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 TRBV7-4A0A0J9YYF1 115 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 K7EIL1 84 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 M0R2N4 97 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 TLX1NBP0CAT3 122 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 UPK3BQ9BT76 320 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 HAMPP81172 84 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 CASC10Q5T4H9 136 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 FAM19A1Q7Z5A9 133 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
CAST-228ENST00000509903 SERP2Q8N6R1 65 aa4.86□□□□□ -1.63
CAST-228ENST00000509903 LINC01547P58512 204 aaPredicted RBP4.85□□□□□ -1.63
CAST-228ENST00000509903 RPL37AP8A6NKH3 93 aa4.84□□□□□ -1.63
CAST-228ENST00000509903 OXTP01178 125 aa4.84□□□□□ -1.63
CAST-228ENST00000509903 CRYGAP11844 174 aa4.84□□□□□ -1.63
CAST-228ENST00000509903 HUWE1Q7Z6Z7 4374 aaKnown RBP4.84□□□□□ -1.63
CAST-228ENST00000509903 ETDCA0A1B0GVM5 59 aa4.84□□□□□ -1.64
CAST-228ENST00000509903 FAM168BA1KXE4 195 aa4.84□□□□□ -1.64
CAST-228ENST00000509903 DEFB105AQ8NG35 78 aa4.84□□□□□ -1.64
CAST-228ENST00000509903 CXCL6P80162 114 aa4.83□□□□□ -1.64
CAST-228ENST00000509903 REG3GQ6UW15 175 aa4.83□□□□□ -1.64
CAST-228ENST00000509903 Q6ZRX8 168 aa4.83□□□□□ -1.64
CAST-228ENST00000509903 DHRS4-AS1Q9P1J3 65 aa4.83□□□□□ -1.64
CAST-228ENST00000509903 IGLV1-50A0A075B6I6 118 aa4.82□□□□□ -1.64
CAST-228ENST00000509903 LOC107984640A0A0U1RRK4 108 aa4.82□□□□□ -1.64
CAST-228ENST00000509903 FAM19A5Q7Z5A7 132 aaPredicted RBP4.82□□□□□ -1.64
CAST-228ENST00000509903 Q8N1X5 172 aa4.82□□□□□ -1.64
CAST-228ENST00000509903 STAB2Q8WWQ8 2551 aa4.82□□□□□ -1.64
CAST-228ENST00000509903 SMIM20Q8N5G0 67 aa4.82□□□□□ -1.64
CAST-228ENST00000509903 MRPL55Q7Z7F7 128 aaKnown RBP4.81□□□□□ -1.64
CAST-228ENST00000509903 SCXQ7RTU7 201 aa4.81□□□□□ -1.64
CAST-228ENST00000509903 UBE2DNLQ8IWF7 75 aa4.81□□□□□ -1.64
CAST-228ENST00000509903 Q8N377 158 aa4.81□□□□□ -1.64
CAST-228ENST00000509903 PSCAO43653 123 aa4.8□□□□□ -1.64
CAST-228ENST00000509903 SPRR1AP35321 89 aa4.8□□□□□ -1.64
CAST-228ENST00000509903 Q9BRP9 147 aa4.8□□□□□ -1.64
CAST-228ENST00000509903 DNAH1Q9P2D7 4330 aa4.8□□□□□ -1.64
CAST-228ENST00000509903 KRTAP4-16G5E9R7 235 aaPredicted RBP4.8□□□□□ -1.64
CAST-228ENST00000509903 KRTAP7-1Q8IUC3 87 aa4.8□□□□□ -1.64
CAST-228ENST00000509903 UBE2BP63146 152 aa4.79□□□□□ -1.64
CAST-228ENST00000509903 NREPQ16612 68 aa4.79□□□□□ -1.64
CAST-228ENST00000509903 IGLV5-48A0A075B6I7 105 aa4.78□□□□□ -1.64
CAST-228ENST00000509903 C3orf84H3BNL1 204 aa4.78□□□□□ -1.64
CAST-228ENST00000509903 BCE1O60756 84 aa4.78□□□□□ -1.64
CAST-228ENST00000509903 FUSP35637 526 aaKnown RBP eCLIP4.78□□□□□ -1.64
CAST-228ENST00000509903 CYSTM1Q9H1C7 97 aa4.78□□□□□ -1.64
CAST-228ENST00000509903 IGKV2-24A0A0C4DH68 120 aa4.78□□□□□ -1.64
CAST-228ENST00000509903 TMEM258P61165 79 aa4.78□□□□□ -1.64
CAST-228ENST00000509903 ST20-AS1Q8NBB2 130 aa4.78□□□□□ -1.64
CAST-228ENST00000509903 KRTAP1-5Q9BYS1 174 aa4.78□□□□□ -1.64
CAST-228ENST00000509903 TRAV7A0A075B6U4 112 aa4.77□□□□□ -1.65
CAST-228ENST00000509903 C16orf90A8MZG2 172 aa4.77□□□□□ -1.65
CAST-228ENST00000509903 C20orf197Q8N268 126 aa4.77□□□□□ -1.65
CAST-228ENST00000509903 A0A096LNI7 61 aa4.76□□□□□ -1.65
CAST-228ENST00000509903 BPY2O14599 106 aa4.76□□□□□ -1.65
CAST-228ENST00000509903 CNBPP62633 177 aaKnown RBP4.76□□□□□ -1.65
CAST-228ENST00000509903 C1orf137Q5JT78 98 aa4.76□□□□□ -1.65
CAST-228ENST00000509903 DNHD1Q96M86 4753 aa4.76□□□□□ -1.65
CAST-228ENST00000509903 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.75□□□□□ -1.65
CAST-228ENST00000509903 ERC2-IT1O76042 136 aa4.75□□□□□ -1.65
CAST-228ENST00000509903 C14orf177Q52M58 125 aa4.75□□□□□ -1.65
CAST-228ENST00000509903 LINC00336Q6ZUF6 198 aa4.75□□□□□ -1.65
CAST-228ENST00000509903 APLNQ9ULZ1 77 aa4.75□□□□□ -1.65
CAST-228ENST00000509903 A0A1B0GW54 56 aa4.75□□□□□ -1.65
CAST-228ENST00000509903 J3KT08 172 aa4.75□□□□□ -1.65
CAST-228ENST00000509903 Q8N9L7 120 aa4.75□□□□□ -1.65
CAST-228ENST00000509903 F8WEM9 126 aa4.74□□□□□ -1.65
CAST-228ENST00000509903 A0A1W2PNM2 257 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms