RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 NPC2P61916 151 aa12.1□□□□□ -0.47
LIN54-208ENST00000509748 Q6ZRX8 168 aa12.1□□□□□ -0.47
LIN54-208ENST00000509748 GAGE2AQ6NT46 116 aa12.09□□□□□ -0.47
LIN54-208ENST00000509748 MUC17Q685J3 4493 aa12.09□□□□□ -0.47
LIN54-208ENST00000509748 S100A7L2Q5SY68 101 aa12.08□□□□□ -0.48
LIN54-208ENST00000509748 PET117Q6UWS5 81 aa12.08□□□□□ -0.48
LIN54-208ENST00000509748 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
LIN54-208ENST00000509748 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.48
LIN54-208ENST00000509748 TRAV23DV6A0A075B6W5 121 aa12.06□□□□□ -0.48
LIN54-208ENST00000509748 C4orf48Q5BLP8 95 aa12.05□□□□□ -0.48
LIN54-208ENST00000509748 COA6Q5JTJ3 125 aaKnown RBP12.05□□□□□ -0.48
LIN54-208ENST00000509748 TIMM17BO60830 172 aa12.04□□□□□ -0.48
LIN54-208ENST00000509748 C3orf79P0CE67 100 aa12.04□□□□□ -0.48
LIN54-208ENST00000509748 LINC00308Q8TCZ7 52 aa12.04□□□□□ -0.48
LIN54-208ENST00000509748 ZNF73O43830 326 aaPredicted RBP12.03□□□□□ -0.48
LIN54-208ENST00000509748 TTTY13Q9BZ97 58 aa12.03□□□□□ -0.48
LIN54-208ENST00000509748 CDIP1Q9H305 208 aa12.03□□□□□ -0.48
LIN54-208ENST00000509748 SPINK1P00995 79 aa12.02□□□□□ -0.49
LIN54-208ENST00000509748 MOBPQ13875 183 aa12.01□□□□□ -0.49
LIN54-208ENST00000509748 FP248Q71RG6 208 aaPredicted RBP12.01□□□□□ -0.49
LIN54-208ENST00000509748 SSBP3-AS1Q7Z2R9 100 aa12.01□□□□□ -0.49
LIN54-208ENST00000509748 SPANXCQ9NY87 97 aa12.01□□□□□ -0.49
LIN54-208ENST00000509748 IGLV9-49A0A0B4J1Y8 123 aa12□□□□□ -0.49
LIN54-208ENST00000509748 ZNF815PA8K554 130 aa11.99□□□□□ -0.49
LIN54-208ENST00000509748 JOSD1Q15040 202 aaPredicted RBP11.99□□□□□ -0.49
LIN54-208ENST00000509748 ST20-AS1Q8NBB2 130 aa11.97□□□□□ -0.49
LIN54-208ENST00000509748 FAT4Q6V0I7 4981 aa11.96□□□□□ -0.5
LIN54-208ENST00000509748 KRTDAPP60985 99 aa11.95□□□□□ -0.5
LIN54-208ENST00000509748 KRTAP13-3Q3SY46 172 aa11.95□□□□□ -0.5
LIN54-208ENST00000509748 RPS29P62273 56 aaKnown RBP11.94□□□□□ -0.5
LIN54-208ENST00000509748 CBY1Q9Y3M2 126 aa11.94□□□□□ -0.5
LIN54-208ENST00000509748 C5orf52A6NGY3 159 aa11.93□□□□□ -0.5
LIN54-208ENST00000509748 Q8N377 158 aa11.93□□□□□ -0.5
LIN54-208ENST00000509748 OR13C6PQ8NH95 151 aa11.93□□□□□ -0.5
LIN54-208ENST00000509748 SPANXDQ9BXN6 97 aa11.93□□□□□ -0.5
LIN54-208ENST00000509748 ANKRD39Q53RE8 183 aa11.92□□□□□ -0.5
LIN54-208ENST00000509748 A0A0U1RQV1 116 aa11.91□□□□□ -0.5
LIN54-208ENST00000509748 HINT1P49773 126 aaPredicted RBP11.91□□□□□ -0.5
LIN54-208ENST00000509748 SPRR1BP22528 89 aa11.89□□□□□ -0.51
LIN54-208ENST00000509748 LINC00518Q8N0U6 118 aa11.89□□□□□ -0.51
LIN54-208ENST00000509748 C9orf153Q5TBE3 101 aa11.87□□□□□ -0.51
LIN54-208ENST00000509748 ATOH7Q8N100 152 aa11.87□□□□□ -0.51
LIN54-208ENST00000509748 DHRS4-AS1Q9P1J3 65 aa11.87□□□□□ -0.51
LIN54-208ENST00000509748 ELOF1P60002 83 aaKnown RBP11.86□□□□□ -0.51
LIN54-208ENST00000509748 LCE2AQ5TA79 106 aaPredicted RBP11.86□□□□□ -0.51
LIN54-208ENST00000509748 C20orf202A1L168 122 aa11.85□□□□□ -0.51
LIN54-208ENST00000509748 SLC25A20O43772 301 aa11.85□□□□□ -0.51
LIN54-208ENST00000509748 C6orf99Q4VX62 202 aa11.85□□□□□ -0.51
LIN54-208ENST00000509748 COX7BP24311 80 aa11.84□□□□□ -0.51
LIN54-208ENST00000509748 SCGB1D4Q6XE38 83 aa11.84□□□□□ -0.51
LIN54-208ENST00000509748 PCP2Q8IVA1 136 aa11.84□□□□□ -0.51
LIN54-208ENST00000509748 IFITM1P13164 125 aa11.82□□□□□ -0.52
LIN54-208ENST00000509748 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
LIN54-208ENST00000509748 MUSTN1Q8IVN3 82 aa11.8□□□□□ -0.52
LIN54-208ENST00000509748 TRBV7-6A0A0J9YX20 115 aa11.79□□□□□ -0.52
LIN54-208ENST00000509748 Q6ZVH6 145 aa11.79□□□□□ -0.52
LIN54-208ENST00000509748 SLC25A34Q6PIV7 304 aa11.77□□□□□ -0.53
LIN54-208ENST00000509748 COPS9Q8WXC6 57 aa11.77□□□□□ -0.53
LIN54-208ENST00000509748 AKR1D1P51857 326 aa11.76□□□□□ -0.53
LIN54-208ENST00000509748 LAMTOR3Q9UHA4 124 aa11.76□□□□□ -0.53
LIN54-208ENST00000509748 HIST3H2BBQ8N257 126 aa11.75□□□□□ -0.53
LIN54-208ENST00000509748 KRTAP4-1Q9BYQ7 146 aa11.75□□□□□ -0.53
LIN54-208ENST00000509748 HIST1H2BLQ99880 126 aa11.74□□□□□ -0.53
LIN54-208ENST00000509748 A0A1B0GWB2 263 aa11.73□□□□□ -0.53
LIN54-208ENST00000509748 A6NDN8 102 aa11.73□□□□□ -0.53
LIN54-208ENST00000509748 LINC01547P58512 204 aaPredicted RBP11.73□□□□□ -0.53
LIN54-208ENST00000509748 SNRPEP62304 92 aaKnown RBP11.73□□□□□ -0.53
LIN54-208ENST00000509748 TAL2Q16559 108 aa11.73□□□□□ -0.53
LIN54-208ENST00000509748 SMIM29Q86T20 159 aa11.73□□□□□ -0.53
LIN54-208ENST00000509748 DEFB105AQ8NG35 78 aa11.73□□□□□ -0.53
LIN54-208ENST00000509748 TEX49A0A1B0GTD5 131 aa11.72□□□□□ -0.53
LIN54-208ENST00000509748 Q1RN00 199 aa11.72□□□□□ -0.53
LIN54-208ENST00000509748 HRCT1Q6UXD1 115 aa11.72□□□□□ -0.53
LIN54-208ENST00000509748 XP32Q5T750 250 aa11.71□□□□□ -0.53
LIN54-208ENST00000509748 IGLV5-48A0A075B6I7 105 aa11.7□□□□□ -0.54
LIN54-208ENST00000509748 SEC61BP60468 96 aaKnown RBP11.69□□□□□ -0.54
LIN54-208ENST00000509748 SMIM11BQ8TCY0 68 aa11.68□□□□□ -0.54
LIN54-208ENST00000509748 TRAV13-2A0A0B4J235 113 aa11.67□□□□□ -0.54
LIN54-208ENST00000509748 CD164Q04900 197 aa11.67□□□□□ -0.54
LIN54-208ENST00000509748 LIMD2Q9BT23 127 aa11.67□□□□□ -0.54
LIN54-208ENST00000509748 PRO1933Q9H354 126 aa11.66□□□□□ -0.54
LIN54-208ENST00000509748 A4D1N5 150 aa11.65□□□□□ -0.54
LIN54-208ENST00000509748 S100A2P29034 98 aa11.65□□□□□ -0.54
LIN54-208ENST00000509748 A0A0G2JQZ4 141 aa11.62□□□□□ -0.55
LIN54-208ENST00000509748 S100A1P23297 94 aa11.62□□□□□ -0.55
LIN54-208ENST00000509748 Q5XG85 94 aa11.61□□□□□ -0.55
LIN54-208ENST00000509748 HSBP1L1C9JCN9 74 aa11.59□□□□□ -0.55
LIN54-208ENST00000509748 H7C2G1 150 aa11.59□□□□□ -0.55
LIN54-208ENST00000509748 KRTAP9-2Q9BYQ4 174 aa11.59□□□□□ -0.55
LIN54-208ENST00000509748 NHP2Q9NX24 153 aaKnown RBP11.58□□□□□ -0.56
LIN54-208ENST00000509748 S100A6P06703 90 aa11.56□□□□□ -0.56
LIN54-208ENST00000509748 LINC00575Q6W349 94 aa11.56□□□□□ -0.56
LIN54-208ENST00000509748 C1orf195Q5TG92 126 aa11.55□□□□□ -0.56
LIN54-208ENST00000509748 C9orf92A6NGG3 77 aa11.54□□□□□ -0.56
LIN54-208ENST00000509748 VAMP3Q15836 100 aa11.53□□□□□ -0.56
LIN54-208ENST00000509748 SCGB1D1O95968 90 aa11.5□□□□□ -0.57
LIN54-208ENST00000509748 COX8AP10176 69 aa11.49□□□□□ -0.57
LIN54-208ENST00000509748 hADV29S1A0JD25 119 aa11.48□□□□□ -0.57
LIN54-208ENST00000509748 PCOTHQ58A44 107 aa11.48□□□□□ -0.57
LIN54-208ENST00000509748 Q6ZQY7 126 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms